Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <-----------ARR10                         <----------DOF2                <---------ARR14(2)                     --------->WOX13(1)             <---------ICU4                   <---------YAB1                  <---------ATHB12                  <-----------GT1            <-----------GT1             <---------AHL20(2)         <------MYB83--------->YAB1             <--------HAHB4             <------MYB46(1) --------->ARR14(2)           --------->ARR11(3)             --------->AHL20(2)         <---------ANAC55(2)                          <---------ARR11(3)             --------->ATHB51           <---------ANAC46<---------ARR11(3)    <----------ID1             -------->ATHB1             ----------->GT1 --------->GLK1(2)<---------WOX13(1)    ------            <---------ATHB12           --------->MYB46(2)              --------->ATHB12        ------            <---------ATHB51           --------->MYB59  --------->ARR11(3)  ---------->DOF2 <--------            --------->ICU4             --------->MYB111(1)            <---------YAB1 --------->GLK1(2)   gcaaatttccaccaattatttatcaatctttttcatcaagttaggtataactaatcagtatctagggtttcgatgattgaaagacaaaatctttttacct  4588200                                                                 <----------DOF2                                                             <---------ZAT18 <---------ARR11(3)                                 --------->MYB46(3)          --------->GLK1(2) --------->ARR11(3)                         <---------TOE2(3)--------->ZAT14    <-----------ARR10 --->TOE2(3)                                <---------TOE1(3)<---------ZAT14    ------->TEIL --->TOE1(3)                               <---------At5g28300 <----------DOF2 <---------GLK1(2) ---GT1                                   <-----------GT1  --------->ZAT14 <-----------GT1 <-------TEIL   tgaaatcttgagcgatttcacgaacaagacgttggaatggaagtttacggttcaacaactctgtgctcttttggtatttacgaatctcactgattcatca  4588300                                                                                            ---------                                                                                           <---------ARR14(2)                                                                                        --------->ANAC58                                                                                   <---------HSFB2a(2)                                                                                   --------->HSFB2a(2)                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                              <---------HSFB2a(1)                                                                              <---------DEAR3(2)                                                                              <---------HSFC1(2)                                                                              <---------MYB46(3)                                                                              --------->HSFB2a(1)                                                                              --------->HSFC1(2)                                                                             <---------DEAR3(1)                                                                      ---------->DOF2   --------->ANAC58                                                                  <---------HSFB2a(2) <------ZmHOX2a(1)        --------->At4g35610                                      <---------At5g28300--------->LBD16        <---------At4g35610                 ---------->DOF2---------->DOF2 ------------>AtMYB77    <-   --------->YAB1                   <---------YAB1     <---------ANAC55(2)----------->HVH21--------->ARR14(2)   aacaatagtcatcagaaattgaagacgatgagaagattgtgattcgaaaagaagaaaacgtgaaagttaccgaagagcgacggttccaggacggaaacgg  4588400                                --------->GLK1(1)                               <---------GLK1(2)                           <---------ZAT14                           --------->ZAT14                        <------MYB46(1)                        <------MYB83<---------ANAC58   <---------At4g35610                        <---------DEAR3(2)             --------->ZAT2                        <---------ORA47(2) <------NtERF2  --------->At4g35610  <---------ANAC58                       <---------DREB2C(2)------>NtERF2--------->At4g35610     <---------ANAC58                    <---------MYB46(3)    <---------RAP2.6(3)      <------NtERF2                  <---------MYB52(1)<---------ANAC58   <---------ZAT2          <---------ANAC46               <---------LBD16 --------->ARR14(2)    --------->ZAT18         ------>ZmHOX2a(1)     <---------ANAC58  <---------MYB46(3)--------->DEAR3(1)      <---------DEAR3(1)               <--     <---------ANAC58  <---------DEAR3(1)--------->RAP2.6(2)   <-----------HVH21--------->LBD16  <--- >MYB52(1)    ------>ZmHOX2a(1)<---------ARR14(2)   <---------ANAC58   <----------DOF2         ------ --------AtMYB61 --------->LBD16<---------GLK1(1)   <---------ANAC58   <---------DAG2        <-------   tgaggtttcttgactcctccggtagtcggtgcagatttccttgccgccttggtagcgagctgcttcgtcggagcttttcctccgtgtgattttctcgcgg  4588500          --------->ANAC58       <---------TOE1(2)       --------->SPL7     --------->TOE1(2)     <---------SPL7 <---------ANAC58            --------->GLK1(2) <---------ANAC58            <---------ARR14(2)       --------->ICU4                       <--------- -------WOX13(1)  <---------ANAC58   <---------At4g35610                                  <---------TOE2(3) ------ARR14(2)   <---------ANAC58   --------->At4g35610      XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B<------ --->LBD16--------->ANAC46   --------->ARR14(2)   --------->YAB1                ---------->DOF2 <---- --LBD16  --------->ANAC58  <---------GLK1(2)    <---------YAB1     ----------->GT1  <----------DOF2   attgcttcgtacgagccatggcttcttcaagaatctgagagcttagaaactatgaaaagattgaatcagagagaaaaatcgccaaagcttttaatgttgt  4588600                                                                  <---------MYB52(1)                                                                 <-------GAMYB                                                                <------MYB83                                                                <---------DEAR3(2)                                                                <------MYB46(1)               -------                                                                <---------MYB46(3)           <-------                                            <---------ANAC46    ----------->GT1              <-------                                            <---------O2      <---------ORA47(1)             --------    <---------REM1(1)                    ----------->TGA1   <------MYB46(1)                  ========   <---------TOE2(3)---------->DOF2<---------AHL20(2)       <------MYB83                     <------- --RAV1(1)   --------->DAG2       --------->AHL20(2)       --------->MYB59<---------LBD16<---------WOX13(1) ---ANAC46*TSS----------->GT1     <-----------TBP--------->ALFIN1==================================== -----ANAC46---------->DOF2----------->GT1  <---------bZIP60(2)<---------DEAR3(1) <------ZmHOX2a(1)   gttttgatgtagagaaaagtaaaaaagattagtgaattttatagtgacgaggtgtgagaattaggtcggttaattttggggagaggagttgatagacgtg  4588700  ---------->DOF2 -->TOE1(2)                                                       <----------DOF2 --ANAC58                                --------->ARR11(3) ------>ZmHOX2a(2) --TGA1a                               <---------TOE1(3)  --------->ARR14(2) ->TGA1a            <-------TEIL       <---------TOE2(3)  <---------ARR14(2) ============bZIP_DOF      <---------AHL20(2)<---------YAB1<------ZmHOX2a(2) --ANAC58<---------HSFB2a(1)     <---------YAB1    <-----------RAV1(1)     <---------YAB1 <---------ANAC58 ==MYC_MYB       <---------DEAR3(2)    <---------YAB1--------->ALFIN1  <---------GLK1(2)  <---------ANAC58   cgattaaaggcatgttcgacggtccatatttgattttgattaagattatgcatatgtggcgatctgcgctttcgattcttattggtccattttcttgttg  4588800                                            <---------HSFB2a(2)              <<<<<<<<<TBF1    --------->MYB52(1)       ------->TEIL            <-----------GT1  <-------GAMYB             --------->ANAC55(2)                                                  ---- <---------MYB46(3)         <---------ANAC55(2)    ---------->DOF2                   <---------YAB1 --------->MYB52(2)<----------DOF2     <-----------RAV1(1)                       <----------DOF2<----   agtttgttgaatcttcttcttctttggtttaagtaacgtttttgttgcagaaaaaaagaagtaatgttcttaaaatgagtaggctttatatttgagtcta  4588900      ------>ZmHOX2a(2)                                                                             -     <------ZmHOX2a(2)                                                                              <    --------->ARR11(3)                                                                              -    --------->GLK1(2)                                                                               <    <---------ARR14(2)              --------------->AGL15                                          --    <---------AGP1 <---------AHL20(2)        <------ZmHOX2a(1)                                     <-    --------->ARR14(2)       <---------HSFB2a(2)                                              -------    <---------ARR11(3)       <-----------RAV1(2)                                         <---------AHL20(2)   <------ZmHOX2a(1)         --------->HSFB2a(2)                                      ----------->GT1 ----->ANAC46      --------->AHL20(2)  <---------YAB1     <---------AtLEC2   --------->AHL20(2)    <- -----LBD16    ----------->GT1 ---------->DOF2    ------->TEIL           <----------DOF2 --------->AHL20(2)   cgggaggatctataatccagtttaaataggcccagaagcccattataggatgaacattttgcattgttcacataccttttaaaatatgtagttaaataac  4589000           --------->GLK1(2)     <---------YAB1   <---------ICU4  --------->ICU4  <---------YAB1 -------->ATHB12                        ----------->HVH21 ---------ICU4                          <---------YAB1 -------->YAB1                        <---------ICU4 --------ATHB1                      <---------ANAC58 <---------ANAC58                  <------------- ------->ICU4                       <---------ANAC55(2)    <---------AHL20(2)          -------------- --------YAB1                       <---------ANAC58 <---------ANAC46                 --------->YAB1 -->YAB1   <-----------ARR10     <---------MYB52(1)  <---------ANAC58                <---------YAB1 --------ATHB12               <-------TEIL    ---------->DOF2               ----------->GT1   <------   aatgattatgacaaatctagtcaatacaaacatccattacttatgaccgaaagttgcctattgaattgagagcaaatagcgaaaattttcataaataagt  4589100  Previous    Next  AGI:  At1g13370.1    Description:  histone H3, putative. Identical to Histone H3-like 1 [Arabidopsis Thaliana] (GB:Q9FX60;GB:Q8LCA8); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10980.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN70652.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H3; (InterPro:IPR000164) Range:  from: 4587777    to: 4588610    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g13380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27435.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42142.1); contains InterPro domain Protein of unknown function DUF1218 (InterPro:IPR009606) Range:  from: 4589068    to: 4590420    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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