Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                    --------->LBD16         ---------                   --------->GLK1(2)                  <---------YAB1--------->HSFB2a(2)   <---------LBD16                   --------->ARR11(3)             <---------DAG2 ------>MYB83            --------->MYB52(1)         <---------YAB1                      ---------->DOF2     ------>MYB46(1)    --------->ANAC58         --------->ANAC58                  --------->AHL20(2)  <---------ALFIN1     --------->ANAC58         --------->ANAC58                  --------->YAB1      --------->AtMYB61--------->ANAC58         <---------ANAC55(2)        <----------DOF2<----------DOF2  <---------HSFB2a(2) --------->MYB52(1) -->ANAC58         <---------ARR11(3)   --------->WOX13(1)  <-----------GT1   --------->CCA1(2) -->ANAC58 ---------->DOF2 <----------DOF2 <---------AHL20(2) --------->MYB46(3)--------->ANAC58   aaccacatattacgaaagaaaaatctagactttccctactttcaattaaaagccttttgattccaccatccgagaagaagataagctagcaaaccggaaa  4576200                                                   --------->WRKY38(1)                                              --------->LBD16                                             --------->ANAC58                                             --------->LBD16                                             --------->ANAC46                                             --------->HSFB2a(2)                                             <---------HSFB2a(2)                 <---------------------WRI1  --------->ANAC58   <---------CCA1(2) <---------AHL20(2)                         <---------LBD16  <---------AHL20(2) <---------AHL20(1)                        <---------LBD16  --------->AHL20(2) <---------DEAR3(1) --------->AHL20(2)                   --------->KAN4(2)   <---------ARR11(3)   --------->ETT(2) --------->AHL20(1)                  --------->KAN4(1)    --------->ARR14(2)   --------->DEAR3(1) >LBD16     ---------->DOF2          <---------KAN4(1)    <---------GLK1(2)  <-----------HVH21 -->GT1 ----------->GT1            <---------GLK1(2)<-----------GT1  --------->LBD16             <<<<   caataaaatgaagtaaaagggcgaatagaacagaccagattattctcccggaattgaccagattttatatccccaaactcgtcgacggactctaatttct  4576300                                                                 <---------MYB52(1)                                                                 --------->DOF5.7(2)                                                            <---------ALFIN1                                                            --------->DEAR3(1)                                <-----------ARR10           --------->AtMYB61                                <---------ARR11(3)         --------->MYB46(3)                                --------->ARR11(3)      <------ZmHOX2a(2)         --------->TOE2(3)                               <---------CCA1(2)       --------->ARR11(3)     <---------ICU4                            ------>ZmHOX2a(1)          <---------ARR11(3)    <---------YAB1                      <----------DOF2         <---------------AGL15<---------DOF5.7(2)             <- <<<<<TBF1  <---------ALFIN1===================================HOX2a_HOX2a --------->YAB1         ---   tcttcaatgtctccccaatcccttcttttcctaatatctcaccttcttccatatcaagatcaccaccgttaacattctcatcatcgttatattgaacttc  4576400                                                                                  ----------->GT1                  <------NtERF2                      ------>NtERF2              <---------ORA47(1)                 ------>NtERF2               <---------ANAC58                   --------->SPL7             <---------DREB2C(2)        --------->ANAC55(2)                   <---------SPL7          ----------->TGA1           ----------->TGA1<---------At4g35610      ----------->HVH21        <---------ICU4   --------->TOE1(2)   <---------ANAC58         --------->ARR11(3)          <--        --------->YAB1  <---------ANAC58<---------ANAC55(2)       ---------->DOF2<---------DEAR3(1)       --------->ICU4   <---------ANAC58<---------bZIP60(2)      <---------AHL20(2)<------NtERF2 <--- --------ICU4<---------DEAR3(1)<---------AtMYB61   <---------RAP2.6(2)<---------ARR11(3)  --------->MYB46(3) --->ZmHOX2a(1) --------->ALFIN1     ----------->HVH21   <---------ANAC46  <-----------HVH21    <----   ctcatcacgatgatgacggtggccatgcctgcgatggtgatgacgggacttgtgccgcttcggagatttaaagacctcgtcggacggcgaaaacgaccgt  4576500          <---------MYB46(3)                                                         <-------TEIL <--          --------->MYB55(2)                                                      <------MYB46(1) ---         --------->ALFIN1                                                         <------MYB83   <---         <---------AtMYB61                   <------ZmHOX2a(2)                   --------->MYB46(2)      <---------DEAR3(1)                    --------->ARR14(2)               <---------ZAT6 <--------     <---------LBD16                        --------->ARR11(3)              <---------TOE2(3)    <--- <---------MYB46(3)                    <-----------HVH21                    <---------TOE1(3)<------- -------DEAR3(2)             <-----------HVH21------>ZmHOX2a(2)   ----------->GT1--------->MYB52(2) ------DEAR3(1)           <---------ANAC58  <---------ARR14(2) <---------GLK1(1) --------->MYB59 <--- -----MYB52(1)            <---------ANAC58  <---------ARR11(3) --------->GLK1(1) --------->MYB111(1)   cggtgtttgcggtggtttgattctacatgcttgtcactcaccatcagatcgtcgaaattagggggaaatcgcaaaattagggttaggttcgattttgtcg  4576600                                                                                         --------->WOX13(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                              <---------LBD16                                                                         --------->TOE2(3)                                                                         --------->TOE1(3)                                                                        ----------------->AGL1    --- -------ZAT18                ---------->DOF2                         <--------P      ----------->TBP ------>ZAT18                *TSS                                <---------LBD16   --------->GLK1(1) ------ANAC58          --------->LBD16                          --------->ANAC55(2)<-----------TBP--- ---RAV1(1)        <---------ARR14(2)                           <---------ANAC46  --------->ARR14(2) ------ANAC46      ------->TEIL               <-----------GT1--------->ARR14(2) --------->LBD16   <-- ----HVH21         --------->ARR14(2)-------->P   --------->ATHB12--------->ANAC46<---------ARR14(2) ------ANAC58     <---------CCA1(2)  --------->MYB52(1) <---------AtLEC2----------------->AG --------   cgcgctctctctcaatttgtgtatccgtgaaaaaagacttaccagatttaactgatttgtatggttacgcggtagccttaaccggatatataaatcaacg  4576700                                                  <---------ICU4                                                  --------->ATHB12                                                 <---------ATHB12                                       <---------LBD16                                       <---------HSFB2a(2)                                       --------->HSFB2a(2)   <---------TOE1(2)                <---------ARR14(2)--------->AHL20(2)               ------>MYB83   <---------TOE2(2)          <-----------GT1    --------->ICU4                        ------>MYB46(1)   --------->LBD16            <---------WRKY18(1)<---------YAB1                   >>>>>>>>>>WRKY43  <-----------RAV1(2)        --------->WRKY12   <---------TOE2(3)                 >>>>>>>>>>WRKY26 ------>ARR14(2)             ----------->HVH21<---------AHL20(2)                  <---------WRKY18(1) ---->TEIL              <---------AHL20(2)   --------->AHL20(2)            <---------MYB52(1) -------ARR14(2)       <---------MYB52(1)   <----------DOF2<---------AHL20(2)     >>>>>>>>>>WRKY38 ->MYB52(1)      <-----------GT1    --------->ARR14(2)<---------AHL20(2) ----------->GT1<---------ATHB12   aatcccaggtttacttatatttccagttaatttgaccggttctcggatttaatgattttatttatacagattgaacagttaacttgaccaatcttttaat  4576800                                                                             --------->ATHB12                       ------>ZmHOX2a(1)            <----------DOF2         <-------TEIL                      --------->TOE2(3)             <---------DAG2      <---------YAB1                      --------->TOE1(3)   <------MYB83                 <---------TOE2(2)                    <---------ATHB12      <------MYB46(1)            --------->TOE2(2)                   --------->ARR14(2)     <---------MYB46(3)         --------->TOE1(2)               --------->ANAC46       <---------MYB46(3)            <---------ANAC46          <---------MYB52(1)          <-----------RAV1(1)          <---------TOE2(3)         <-----------HVH21         <---------MYB46(3)<----------DOF2<---------ANAC55(2)        ------   ctggcataatcggttagacccaatccttaatttgtagttgttgttggttttgggccttttgggctatataacgtatgattcatgggccatcttattcaca  4576900                           --------->SPL7                          <---------MYB52(1)                         <---------SPL7              --------->YAB1                      -------->P ----------->GT1  --------->YAB1                      <---------At5g28300         ----------->GT1         <-----------GT1 --->ANAC46          <-----------GT1        ------->TEIL       ---------->DOF2                     --   ccagtctgaaaatgaaatcagacttaccgttcgatatgtgaaactgaacgtataataaaaactgacaaagagagtttttcattctgaaatttcacattaa  4577000                   --------->HSFB2a(2)                   <---------HSFB2a(2)                  ------>ZmHOX2a(2)                 --------->CCA1(2)                 <------ZmHOX2a(2)                --------->ARR14(3)                <---------AGP1                --------->AGP1                                                            ------>ZmHOX2a(1)                <---------ARR11(3)                                                       --------->TOE2(3)                <---------ARR14(3)                                                  <----------DOF2                --------->ARR14(2)              --------->YAB1                      <---------DAG2                <---------ARR14(2)    --------->ARR14(2)                         <-----------GT1                --------->ARR11(3)    <---------ARR14(2)                    --------->AHL20(2)               --------->RVE1(1) --------->MYB52(1)                        --------->AHL20(1)            ---------->DOF2     --------->TOE1(2)                          <---------ARR11(3)       <       --------->YAB1          --------->MYB46(3)                          <---------AHL20(1)       <      <---------YAB1       --------->MYB46(3)  --------->ZAT6   <-----------GT1 <-----------GT1  ---- -------->DOF2----------->ARR10<---------MYB52(2)              <-----------GT1  <---------AHL20(2)  -   caaaagctatgaaaaaaagatctggaagaacaaacaaacgaattcgctaatactaatctagcaaattacccttacaaaatatttaacttttcctaaatcc  4577100  Previous    Next  AGI:  At1g13350.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G25840.2); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G53640.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G25840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42124.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 4572416    to: 4576629    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g13360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G25870.1); similar to unknown [Populus trichocarpa] (GB:ABK92948.1) Range:  from: 4576954    to: 4577890    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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