Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   <---------YAB1                                                                 <---------YAB1 --------ICU4                                                                <---------YAB1 ------>ATHB1                                       <---------HSFB2a(2)      <---------MYB52(1) ------->ATHB51                               <---------------AtSPL8        --------->TOE2(3) ------->ATHB12                            <---------AHL20(2)              --------->YAB1 ------>ICU4                            --------->AHL20(2)                 <---------ICU4 ------>AHL20(2)                       <---------AHL20(2)               <---------ICU4 -------AHL20(2)                       --------->AHL20(2)            --------->YAB1 -------YAB1                       --------->AHL20(2)             --------->AtMYB61 ------>AHL20(1)                 ----------->GT1    --------->HSFB2a(2)<---------YAB1 --->ICU4                      ---------->DOF2--------------->AtSPL8<---------YAB1                  < -ZAT6                     ---------->DOF2 --------->AHL20(2)    --------->MYB46(3)                 -   attattagacttgttgataccaaagactagaaagaaagaaaataaataaatgtactagaaaaaatccaccatcataatcgttattgttgtttgatttttg  4544600                                                                                      <---------ICU4           --------->CCA1(2)                                                         --------->ICU4          --------->ARR11(3)                                                         <---------YAB1          <---------ARR11(3)                                 ============================HOX2a_HOX2a         <<<<<<<<<RAP2.2                                     <------ZmHOX2a(1)     --------->YAB1  <-------TEIL<-------TEIL                                  ----------->GT1       <------ZmHOX2a(2)  ------>ZmHOX2a(2)                                        ----------->GT1        <---------YAB1 <------ZmHOX2a(2)                                        --------->CCA1(2)      <---------ARR11(3) ---------ARR14(2)                                 <---------HSFB2a(2)    --------->DAG2 -------->ARR14(2)       --------->MYB46(3)     --------->GLK1(2)        ---------->DOF2   tggatccatttagatatacatttatcaacgactaattctcaatctaacaaattctataagataggaaaattttgaaaaagcacgatcataatttagaaaa  4544700                                                                            <---------ARR11(3)                                                                            <---------AHL20(1)                                                                    <---------ETT(2)                                                                    --------->bZIP60(1)                         <---------AHL20(2)                         ----------->GT1                        <---------AHL20(2)                   --------->AHL20(2)           <---------ICU4                 <-----------GT1                             <---------AHL20(2)<----------DOF2              ----------->GT1                               --------->YAB1  --------->ARR11(3)    <--             --------->DAG2              <----------DOF2 --------->YAB1     --------->AHL20(1)   ----            ---------->DOF2       <---------YAB1         --------->TOE1(3) --------->RVE1(1)     <---         --------->YAB1 --------->AHL20(1)               --------->TOE2(3) --------->CCA1(1)   ------        <---------ATHB12--------->AHL20(2)          --------->ANAC58<---------bZIP60(1) --------->ARR11(3)      --------->WOX13(1)<---------AHL20(1)          --------->ANAC58<---------ANAC46    --------->GLK1(2)   acacaagttaatcataaagttactaatttaatagctataatttcttttagttacaagaaccataaaaatgtcgtcaaatatcttttagataatcttgtca  4544800                      <---------ARR14(2)                      --------->ARR11(3)                      <---------ARR11(1)                      <---------ARR11(3)                      --------->ARR14(2)                     <---------CCA1(2)                   --------->YAB1                                               ------------>CBF                  <---------ATHB12                                           --------->ANAC46            --------->ANAC58                   --------->DAG2                --------->ANAC58 -------ICU4--------->ANAC58                  ---------->DOF2                --------->ANAC58       < ----->ICU4 --------->ANAC46               <---------ANAC46         <------ZmHOX2a(2)            <--- ------YAB1 --------->AtLEC2     <-----------------AGL1          ------>ZmHOX2a(2)          --------- --->YAB1 ---------->DOF2        --------->ANAC46    <---------ANAC46--------->YAB1      <----------DOF2   taattcaaaacttcaagcaaatcatatcttcataaaccccatatggcctaaagtagcctatacttgatcgatcatatacaagcccaatgggctttaaagt  4544900              <---------AHL20(2)              --------->AHL20(2)             --------->AHL20(2)                                                                   <--      ----------->GT1                       --------->ZAT14                                     <---- ---------MYB52(1) --------->ARR11(3)       <---------ZAT14                                     <---- ----TEIL    <---------AHL20(2)       <-----------GT1                          <---------ZAT14  <---- ->DOF2      --------->YAB1     <---------AHL20(2)*TSS   <---------YAB1        --------->ZAT14  <----   ccattagtttgttaattaaaatatcaagaaccattttttttttctcttcactgcaaattttgatattttgggttttagcagtgaagtttgcgaaaatggc  4545000                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                         --------->At4g35610<--------                                                               <---------ANAC46             ---------                                                            --------->ANAC46            <----------DOF2        <-----------GT1                                    <---------At5g28300   --------->HSFB2a(2) ----NtERF2                                                <---------LBD16       <---------HSFB2a(2)< -----ANAC58                                             ----------->HVH21   <---------ANAC46    <--- -----RAP2.6(2)         <-----------TGA1                <-----------HVH21<---------ZAT2<---------ANAC58 -----ANAC58      --------->ARR14(2)           <---------At4g35610       <---------At4g35610<-------- -----ANAC46      <---------GLK1(2) <----------DOF2    <----------DOF2   --------->ZAT2<---------ANAC58   gtcttcggtttttctatccagtttctcgtcatcgtcttctttgcaactctgctcttcctttcacggcgagtacttagctccgtcgagatgctttctcgga  4545100                                                                                     -------->ATHB1                                                                                     <--------ATHB1                                                                                     --------->ATHB51                                                                                     <---------ICU4   <-----------HVH21                                                                 --------->YAB1  --------->LBD16                                                                    --------->ATHB12 ----->ZAT2                                                                         <---------ATHB51 ------At4g35610                                                                    <---------YAB1 ----->GLK1(1)                                  <-----------HVH21                   <---------ATHB12 ----->At4g35610                             <---------ANAC58                       --------->ICU4 ------GLK1(1)                 <---------MYB52(1)                                ------------>ATHB5 -LBD16                     <---------LBD16<-----------GT1                  <---------MYB52(1) >HSFB2a(2)           --------->ZAT6    <---------ICU4                     <-------GAMYB  <---------ANAC58 ---------LBD16       <-----------GT1  --------->ICU4                     --------->MYB52(2)        - ------ZAT2      <----------DOF2    ---------->ID1<-----------GT1       <---------MYB52(1)<---------ANAC58 -HSFB2a(2) ------>ZmHOX2a(1) --------->LBD16<---------ANAC58  <---------MYB52(1)<---------AHL20(2)<-   gctccggtcacttcctcttctttatcactctccggtttgtcatttttacttgtcactgtttcttcgtttgctctgttcgttattcaattattgcttcgtt  4545200                         <<<<<<<<<<WRKY26                         <<<<<<<<<<WRKY43                         <<<<<<<<<<WRKY38                        <-----------HVH21                   --------->ATHB12                   <---------ICU4                   --------->ATHB51                   -------->ATHB1                  <---------YAB1                  --------->ICU4          --------->GLK1(1)      <---------WOX13(1)                                      <---------ARR11(3)          --------->CCA1(2)    --------->ATHB12                                  --------->ATHB51         <---------ARR11(3)   <---------YAB1                                    <---------AHL20(2)         --------->ARR11(3) <---------At4g35610                                 <---------YAB1   <---         <---------ARR14(2) --------->At4g35610           <---------MYB46(3)<---------ANAC46   <----- -------->ATHB12  <---------AHL20(2)                     <---------MYB52(1) ----------->GT1 <-------- --------YAB1     <---------ATHB51                      <-------GAMYB<---------YAB1      --------->ARR11(3)   tttcattggaagatatcgaaattattggtcatctgattggaaattttgaaactttctccgttgttccgattttgaatgttgtataattgaagaactttgg  4545300                                                     ------------>AtMYB77                                                   --------->LBD16                            <------MYB83          --------->ANAC46                     <-----------HVH21                     --------->ARR14(2)     <---------ARR14(2)                     <---------LBD16                     <---------ARR14(2)     --------->ARR14(2)                   --------->GLK1(2) ------ANAC46       <---------CCA1(2)<---------ARR11(3)                     ---------->DOF2     ----- ----ANAC46       --------->YAB1     --------->ARR11(3)                   --------->ANAC58      ----- --DOF2  <-----------GT1    <------MYB46(1) <---------GLK1(2)             --------->ANAC58    <------ZmHOX2a(1)   tgtatgaagtttatcttctctcatatctgtaggtaagaagaactcatattctccgagacagttccatgtttctgccaagaaagtttctgggttagaggaa  4545400                    <-----------GT1                   --------->AHL20(2)      --------->YAB1       ---------->DOF2           ---------->DOF2      --------->ZAT6 --------->AHL20(2)        --------->YAB1 <----------DOF2     ----------->GT1 ----------->GT1 ---->ANAC58   --------->AHL20(2)       <---------CCA1(2)--------->YAB1                  <---------At4g35610 ---->ANAC58 ----------->GT1  <-----------GT1  <---------AHL20(2)           <----------DOF2         -   gccattagaatcagaaagtaattaactttgtttaactctcttgtatcataaaaatgcaatcttgaaaaaagaattcatcttttggtcatagagctaatag  4545500  Previous    Next  AGI:  At1g13270.1    Description:  MAP1C (METHIONINE AMINOPEPTIDASE 1B); metalloexopeptidase. Identical to Methionine aminopeptidase 1B, chloroplast precursor (MAP1B) [Arabidopsis Thaliana] (GB:Q9FV52;GB:Q9FX70); similar to MAP1B (METHIONINE AMINOPEPTIDASE 1C), metalloexopeptidase [Arabidopsis thaliana] (TAIR:AT3G25740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42097.1); contains InterPro domain Peptidase M24A, methionine aminopeptidase, subfamily 1; (InterPro:IPR002467); contains InterPro domain Peptidase M24, catalytic core; (InterPro:IPR000994); contains InterPro domain Peptidase M24, methionine aminopeptidase; (InterPro:IPR001714) Range:  from: 4544950    to: 4547309    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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