Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------At4g35610                                                                                          --------->At4g35610                                                                                          ------>NtERF2                                                                                         <---------DEAR3(1)                                                                                      ------>ZmHOX2a(2)                                                                                      <---------DEAR3(1)                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR14(2)                                                                                   --------->GLK1(1)                                                                                   <---------GLK1(1)                                                                                  ----------->ARR10                                                                                --------->LBD16              <---------TOE1(1)                   <------MYB46(1)              <---------ANAC46             --------->SPL7                       <---------ANAC55(2)          <---------DEAR3(1)           <---------SPL7                         <---------ANAC46            <---------LBD16           --------->LBD16                        <------MYB83                --------->ATERF1(1)          <---------ANAC46                       --------->MYB111(1)          <---------At4g35610         <---------LBD16                         --------->MYB46(2)           <------NtERF2         <---------At4g35610                     --------->MYB52(2)           ------>NtERF2<------NtERF2         --------->At4g35610                     --------->MYB59             <---------RAP2.3(1)      <---------At4g35610                    <------MYB46(1)                <---------RRTF1(2)      --------->At4g35610                    <------MYB83                   <---------RAP2.3(2)     <-----------RAV1(1)                    --------->MYB59                 <---------DEAR3(1)     -- ---------CCA1(1)                           --------->MYB111(1)             <---------RAP2.6(2)  <--- ---------RVE1(1)                           <---------TOE1(2)              <---------LBD16--------->ABI4(2) --------ARR11(3)                          <---------MYB55(1)      ==========================HOX2a_HOX2a --------ARR14(2)                          <--------P              <------ZmHOX2a(1)<---------ARR14(2) ------->ARR11(3)                       --------->ALFIN1           =========================HOX2a_HOX2a ------->ARR10<---------TOE2(1)  --------->At5g28300        --------->ICU4<-----------RAV1(1)------>NtERF2 -ZmHOX2a(1)------>NtERF2       ----------->GT1<---------MYB52(1)<---------ANAC46<------NtERF2-------   agatattttgctgcggacgaggttagggtcaaaatggtaaatgtggtaggttaggtatgggaatgttgaggagattatgcggcggagatcggcgctgcga  4529700                                                                      --------->DEAR3(1)                                                                      ----------->HVH21                                                                     --------->RAP2.3(1)                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                    --------->LBD16                                                                    <---------ATERF1(1)                                                                    <---------RAP2.3(1)                                                                    ------>NtERF2                                                                   <---------DEAR3(1)                                                                   --------->ATERF1(2)             <---------ANAC46                                      --------->DEAR3(1)       <---------ANAC46                                            <---------ATERF1(2)    --------->ALFIN1                                              --------->ATERF1(1)  <---------ANAC58                                                <---------LBD16             <------  <---------ANAC58                                                <------NtERF2  --------->ANAC58  --------->ALFIN1                                                --------->RAP2.3(1)         <------ --------->MYB55(2)                          --------->ALFIN1    ------>NtERF2   --------->ANAC58 <---------MYB46(3)                        <---------ANAC58      <---------ATERF1(1)          <------ ------->At5g28300                         <---------ANAC58      <---------RAP2.3(1) ----------->GT1 ------DEAR3(1)                            <---------ANAC46     --------->ANAC46<---------LBD16 ---->HVH21  <---------bZIP60(2)  <------ZmHOX2a(1)  --------->MYB52(1)------>NtERF2<---------TOE2(2)   cggtgagtggcgatgaagtggaaaacgatgttttcaggacaagaagcgtgttggagaacggagaagacgccggcgactgagccacggaggtaaattgcgt  4529800                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                             <------NtERF2                                                                                            ---------                                                                                           --------->DEAR3(1)                            <---------ANAC58              <---------ANAC58              --------->ANAC58                       --------->ATHB12                   <---------ANAC46              --------->ANAC58                     <---------WOX13(1)          --------->GLK1(1)              <---------MYB52(1)                   --------->ATHB12       ------>ZmHOX2a(2)                    <---------RAP2.6(3) ---ANAC58        <---------YAB1    <---------ANAC58      <---------ANAC58    <---------ANAC58------- ---ANAC46    --------->ALFIN1      <---------ANAC58     ---------->ID1       <---------ANAC58<------ ---ANAC58  <---------ANAC46<---------ANAC58--------->LBD16                 ------>NtERF2 <---------LBD16   cgagagtcatagcgatgtggatgattgatgggttgtgttcgtgatccgaaggtatccatgtcgttttggagcattctctgccgtttcgaaacgccggagc  4529900          <------NtERF2        <---------LBD16    ---------->DOF2                            <---------YAB1 --------->ANAC58                            --------->YAB1 --------->ANAC55(2)                   --------->At4g35610 --------->ANAC46                      <---------At4g35610 --------->ANAC58                      <---------ZAT2 --->ZAT2--------->LBD16              ------->TEIL ----At4g35610 <-----------HVH21   --------->ANAC58 --->At4g35610<------MYB46(1)      --------->ANAC58 <------MYB83 ---ARR14(2)  <------MYB83         <---------bZIP60(2)                                           <--- >LBD16<---------LBD16          ----------->HVH21   <------MYB46(1)         --------->ANAC46     ---- -->ARR14(2) <---------AtMYB61  ----------->TGA1    <---------ANAC55(2)     --------->ANAC58--------- -----ARR10 <--------P         <-----------HVH21   --------->MYB59          --------->ANAC58<--------   ttcacgaaacgcggggaggtcagtgagagtgactgtgacgcagctaattgtgataggtaagagtagaagaagacataaacgcaaacgcagagaagacatt  4530000              <---------ANAC46                                                                 <-----            <---------ANAC46                                                     <---------DEAR4(1)         <-----------RAV1(1)                                   --------->CCA1(2) <---------DREB2C(2)  --------->MYB59                    --------->ANAC58       *TSS                 --------->ETT(1) ------AHL20(2)<---------ZAT14       --------->ANAC58     ---------->DOF2        <---------DEAR3(1) ----->AHL20(2)--------->ZAT14  <---------ZAT14   <---------ZAT14             <-----------RAV1(1) >ARR11(3)--------->ZAT14      --------->ALFIN1   --------->ZAT14   <---------TOE2(3)          ------ -ARR11(3)<---------ZAT14   --------->ATHB12      --------->ZAT18--------->ALFIN1<---------At1g77200<   tttttaggtctgtgttgtgtagtctgtgagtgagtggagaggcaagagagagtgaactgtgaaagagatggaggttttttgtgtcggtgttaatggcaga  4530100                                                                  <---------ANAC58                                                         <---------WOX13(1)                                                        <------------CBF                                                       --------->ATHB12      --------->DAG2                                                      <---------YAB1        ---------->DOF2      <---------HSFC1(2)                              --------->ICU4      --------->AHL20(2)     ----------->ARR10                               <---------TOE2(3)    <---------AHL20(2)     --------->MYB52(2)                          <------------CBF <---------ANAC55(1)     --------->MYB111(1)                        --------->MYB52(2)<---------ANAC46    <--------P                      <---------YAB1<---------WOX13(1)      --------->YAB1        ----- ----At4g35610               <---------TOE2(3)<---------MYB52(1)  <---------ANAC58        ---------->DOF2 --->At4g35610         <---------DAG2        --------->TOE2(3)   --------->MYB52(2)     <---------YAB1 ---------ANAC46       <----------DOF2      ----------->GT1    <---------MYB52(1) --------->MYB59   ttaggggtagtttcgacattttagactttttgtggtttatgcttaagcgttaattgatgattgtcgttacttgtaataaaaagttaagtcatgaaagtta  4530200                                  <---------ICU4                                            ---------                                  -------->HAHB4                                  ------>MYB46(1)                                  --------->YAB1                                  ------>MYB83                                 --------->ICU4                                 ------->GAMYB <------                               <--------HAHB4                                   ===============MYC_MYB                               --------->ATHB51                                <------------AtMYB77                               <---------ICU4                                  --------->MYB46(3)                               --------->YAB1                                <---------ARR14(2)                               <--------ATHB1                                --------->MYB52(1)                              --------->ICU4                       --------->ANAC58       <----------                              <---------ATHB12                     --------->ANAC58  <---------O2                              --------->AHL20(2)                   --------->ANAC46  --------->TGA1a                              <---------ATHB51                    --------->SPL7=====================                            --------->YAB1                      <---------SPL7 ================MYC_MYB                           --------->ZAT6                      <---------ANAC58--------->DEAR3(2)                         <-----------GT1                       <---------ANAC58======================                       <---------AHL20(2)                     <---------------AtSPL3 --------->O2 ------>GT1           --------->YAB1       <----------DOF2    <---------------AtSPL8 <---------TGA1a   gtgaataagtatgttttgggataattttaacaataattatgaagtctttcggtgattttgaaaatgcgtacgaaatgggtaaccgactcgtgagggtaca  4530300             ----------->GT1            <-------MYC4            ------->MYC4            <-------PIF5                          <---------DEAR3(1)            ------->MYC2                         --------->SPL7            <-------MYC2                         --------->RAP2.6(3)            ------->MYC3                       <---------SPL7                        --------->AHL20(2)            <-------MYC3  >>>>>>>>>>WRKY6  --------->ATHB12                     <------ZmHOX2a(2)           --------->ANAC55(2)   <---------ARR11(3) <---------------------WRI1------->GAMYB           <---------O2  --------->WRKY45  --------->YAB1                    --------->MYB46(3)           --------->O2  --------->WRKY38(1)   ----------->HVH21            <---------TOE2(3)      -- >ZAT18    --------->TGA1a<---------WRKY18(1) --------->TOE2(1)             <---------TOE1(3)     --- -TEIL     <---------TGA1a>>>>>>>>>>WRKY11 <---------ICU4                  <-----------GT1        <-- -----AtSPL8------->PIF5 --------->WRKY12 <---------ATHB12               <---------AHL20(2)   ------- ====================MYC_MYB   --------->ICU4 --------->TOE1(1)       --------->ARR11(3)     <------- ====================MYC_MYB   <---------YAB1--------->At4g35610      <---------ARR11(3)    ---------   atcgtctatttccacgtgttaaacatgttgaccatgattttctaatcatcggacggctataaatcgtatggagattttaacgatcgattaaaaatttaaa  4530400         <-----------GT1      <---------ICU4     --------->ICU4   --------->YAB1  --------->AHL20(2) ------->AHL20(2) ------>AHL20(2)                                                            <---------YAB1 -------AHL20(2)                                                          --------->YAB1 -->AHL20(2)        --------->GLK1(2)     --------->YAB1          --------->YAB1    <----------DOF2 --AHL20(2)  --------->ZAT14--------->ARR11(3)            ---------->DOF2<---------YAB1  <----------DOF2 >AHL20(2)   <---------ZAT14<---------ARR11(3)  --------->ATHB12 <-------TEIL<---------ICU4      <---   ataaataaaaattactacagagaaactgaatatctcaagaacattgatatcgattgaaccaaaagcattcatgttatcatcattttcttttctttgtttt  4530500                                       <---------ARR14(2)                                       --------->ARR14(2)                                      <---------CCA1(2)                                   <----------DOF2            <---------WRKY38(1)     --------->YAB1                                  <---------ARR14(2)           <<<<<<<<<<WRKY38  --------->ANAC58                                       --------->ARR14(2)           <<<<<<<<<<WRKY26  --------->ANAC46                    ----------->GT1<-------TEIL           <<<<<<<<<<WRKY43  <----------ID1                    ---------->DOF2--------->ARR14(2)    --------->ARR11(3) <---------AHL20(2)                    --------->ARR11(3)--------->CCA1(2)   --   --------->YAB1      --------->AHL20(2)                 <---------TOE2(3)   <---------ARR14(2)----- --------GT1<---------WRKY12 --------->ANAC58            ---------->DOF2   <------ZmHOX2a(1)   ------   tacattgatattggtcaattggattttaaatacgccaaacatatctgatataaactgattaaagataaagaaaaacaggagatacagataggctttatca  4530600  Previous    Next  AGI:  At1g13250.1    Description:  GATL3 (Galacturonosyltransferase-like 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to GATL4 (Galacturonosyltransferase-like 4), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G06260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42094.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 4528620    to: 4530060    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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