Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ICU4             -------->ATHB1             --------->ATHB12                   --------->GLK1(2)       --------->ANAC46     <---------ARR14(2)  --------->ARR14(2)                   --------->ANAC58   ------>ZmHOX2a(1)        <---------ICU4      <---------ARR14(2)                   --------->ANAC58  --------->ANAC46    <-----------GT1---------->DOF2--------->At4g35610      --------->YAB1 ---ZAT18   <---------ATHB12--------->ARR14(2) <---------GLK1(2)            <---------ATHB12     ----   ctctcctccactaaatcattgaattttccatatttgctccaaagaacaagaatctgctaaacgatatagagaggtctaatcaaaaacaagtcaaactctt  4525700                                                  ---------->DOF2                                                 <---------MYB52(1)                                                <-------GAMYB                                               <---------DEAR3(2)                                              <---------DEAR3(1)                                       <-----------HVH21                                       ------>NtERF2                                      --------->ANAC58            --------->ANAC58              <----                                      --------->ANAC46            --------->ANAC46        ---------->DOF2                                      --------->ANAC58            --------->ANAC58      --------->ANAC46                                     ------>ZmHOX2a(2)       --------->YAB1             --------->ANAC58                                     --------->MYB46(3)      <---------ICU4             --------->ANAC58            <---------GLK1(2)       <------ZmHOX2a(2)       <---------ATHB12         ------->GAMYB    <-------TEIL                   <---------ARR14(2)--------->At4g35610            <---------ALFIN1 ----->MYB52(1)    <---------ANAC46--------->ARR14(2)<---------At4g35610          ----------->RAV1(1)   aaccgattcatccacaatctcgcgtagaatcaaacccgatccgccaggccggttaagctccaaacatcacgactcttctccctccaacacacgaaagcct  4525800                                                        ----------->RAV1(1)                                                  --------->YAB1       --------->TGA2(1)                   <------ZmHOX2a(1)              <---------ANAC58     <---------TGA2(1)                   =================================HOX2a_HOX2a        --------->bZIP60(1)                 <---------TOE2(3)                <---------ANAC58     --------->ANAC46         --------->ATHB12                        <---------ATHB12      <---------bZIP60(1)        <---------YAB1                         --------->WOX13(1)     --------->RAP2.6(3)        --------->ICU4                       <------ZmHOX2a(2)      ----------->TGA1            <----      ---------->DOF2   <---------GLK1(1)  <------ZmHOX2a(1)      --------->YAB1         <---------ANAC46 ------DOF2<---------WOX13(1)            <---------TOE2(3) ---------->DOF2<---------ALFIN1      <----   tttatacataaagattgatgaggatgaaatctgaagacagattgaggatcaatcgtgccaacaaagaagcatgacgacacatcttcgaatgatgtatagc  4525900           <----------DOF2                                  ------>MYB46(1)        ---------->ID1          ------>ZmHOX2a(1)       ------->TEIL    <----------DOF2             <----------DOF2        <-----------GT1 -----ANAC58         --------->At4g35610           <----------DOF2                 --------->ATHB12 -----ANAC58         <---------At4g35610--------->ARR14(2)  ------>MYB83<----------DOF2      --------   ttagctctttgttctttaagaacagctccaagtcctttgctcgatactcttctctttgaacctcccatcttcatctttgatatatcgattgaatttggca  4526000                                                                                                  ---                                                                                                 ----                                                                                          <---------HSFB2a(2)                                                                                          --------->HSFB2a(2)                                                                --------->CCA1(2)      <---------YAB1                                                               <---------ARR14(2)     <-----------TBP                                                              <------ZmHOX2a(1)     <----------DOF2                                                             *TSS                   =================                                                             ----------->GT1        --------------->AGL15                                                            <---------TOE2(3)       ------>ZmHOX2a(1)    --------->ANAC58                                        ------------------------>ANAC81     <----    --------->ANAC58                                 --------->YAB1---------->DOF2  <---------------AGL15  ---------->DOF2                                  <---------TOE2(3)               ----------------->AGL3 --->GT1     <-----------GT1                  <------ZmHOX2a(1)--------->ARR14(2)  <-----------------AGL3   aaaacaaagcaaatttttcttctcttagggtttgagagatgtattgaaggattaatgaaaatgaggatacaaagaagaagagagtcctttttatagaagg  4526100                                                <---------ANAC58                                                <---------ANAC58                      <---------ALFIN1          <---------ANAC46                     <---------REM1(2)      ===========================bZIP_DOF              --------->ALFIN1              --------->O2            <---------O2                    --------->TGA1a               <---------YAB1            --------->O2<---------ALFIN1    <---------O2               --------->AHL20(1)            --------->TGA1a                ------>MYB83                <---------AHL20(2)     <------------CBF--------->ZAT14       ------>MYB46(1)             <---------AHL20(1) -------->GT1------->MYC3                 <---------ALFIN1             --------->AHL20(2)        ---- ------->GT1<---------TGA1a              --------->MYB46(3) <----------DOF2   --------->ATHB12   <--- =====================bZIP_DOF     <-----------GT1         <---------ANAC58  <---------YAB1  -------- --ZmHOX2a(1)<-------MYC3     <---------YAB1<---------TGA1a<---------ANAC58--------->YAB1  <---------WOX13(1)   agataaatattgaaacgtggccctacacacttcttattcactacccacttgtgtgttttttgcgttattgcaatttattatcattgaatattgaatgatt  4526200                                                                                       ------->MYC2                                                                                       <-------PIF5                                                                                       <-------MYC4                                                                                       ------->MYC4                                                                                       ------->PIF5                                                                                       <-------MYC2                                                                                       <-------MYC3                                                                                       ------->MYC3                                                                                      <---------ANAC46                                                                                      --------->O2                                                                                      <---------O2                                                                                      ============MYC_MYB                                                                                      ============MYC_MYB                                                                                      ==============MYC_MYB                                                                                      --------->PIF3(3)                                                                                      --------->TGA1a                                                                                      --------->bZIP60(2)                                                                                      <---------TGA1a                                                                                      <---------PIF3(3)                                                                                     ------>NtERF2                                                                                    <---------ALFIN1                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                                 --------->bZIP60(2)                                                                                 --------->ANAC58                                                                             --------->ANAC58                                                                             --------->ANAC58    <---                                                         <------MYB83       <-------MYC3        <----                                                         <------MYB46(1)    <-------MYC2        -----                                                       <---------ANAC46     ------->MYC2   <--------P                                                     <---------MYB46(3)  --------->ANAC58  <---------WOX13(1)                                                    <---------MYB52(1)   <---------ALFIN1 <-------GAMYB  ----------->GT1       --------->LBD16            <-------GAMYB         --------->ANAC58<---------MYB46(3) ----->AHL20(2)       --------->ANAC46             =============================================MYC_MYB ------AHL20(2)--------->ANAC46                  <------NtERF2    --------->YAB1------->TEIL   <----- ->ATHB12    <-----------GT1                  ---------->ID1    ------->TEIL------->MYC3--------->ALFIN1   tatatggtcacaatttcacaaaaccccccaaacatctatgccctatttgtccccgttgttggtatgtatcatggcacacatgcacgccacgtggttgatt  4526300            <-------GAMYB           <---------MYB46(3)      --------->AHL20(2)      <---------AHL20(2)          --------->AHL20(2)                                  --------->ANAC46  <---------AHL20(2)       --------->AHL20(2)                           <---------ARR11(3) --------->AHL20(2)        <---------AHL20(2)                           <---------ARR14(2) <---------AHL20(2)       <---------AHL20(2)                            --------->ARR11(3)     <----- ------AHL20(2)           <---------AHL20(1)                            --------->ARR14(2)     <----- -----AHL20(2)            --------->AHL20(2)                           <------ZmHOX2a(1)       <----- ---->AHL20(2)            --------->AHL20(1)                       <---------TOE1(1)  --------->ANAC58 ----WOX13(1)         <---------YAB1                          <---------ICU4          --------->ANAC58   tattttaattttttggttgtaattctaatttattttttatatataagaagttgcaagtctctcattactacgaggatttttcaaacagacgaaactgggt  4526400                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      <---------ARR14(2)                                                                                      <---------ARR11(3)                                                                                      --------->AGP1                                                                                      --------->ARR14(2)                                                                                      <---------AGP1                                                                                   <---------HSFB2a(2)                                                                                   --------->HSFC1(1)                                                                                   --------->HSFB2a(2)                                                                               <---------ANAC58                                                                               <---------ANAC46                                      <---------YAB1                     --------->ARR11(3)     -----                                  <---------GLK1(2)                      <---------ARR11(3)     <----                               <---------HSFB2a(2)          <------ZmHOX2a(1)  <---------ANAC58 <----                               --------->HSFB2a(2)      --------->ICU4 <---------AHL20(2)      ------       <---------ALFIN1    <---------ANAC46        --------->LBD16    <---------ATHB12--------->ARR11(3) --GAMYB                   <---------ANAC58      <---------LBD16  <---------MYB52(2) <---------CCA1(2) ----ANAC58                <---------ANAC58<-----------GT1  ===================================HOX2a_HOX2a ----ANAC58          <---------AHL20(2) <---------AHL20(2)  ==================================HOX2a_HOX2a   tgtcttcttccacctatagatgttatattgcttctagattattattttctctctgggaattaggagcaactaataaatcttgcttctagatcttagggtg  4526500                                                                                                  <--         <------ZmHOX2a(2)                                                                     ------        <---------ARR11(3)                                                                     <-----        --------->AGP1                                                                         <-----        <---------ARR14(2)                                                                     ------       --------->GLK1(1)                         <-----------GT1                               <-----       --------->At4g35610                  --------->AHL20(2) --------->ANAC58           --------->AHL20(2) ------>GT1                                 <---------YAB1     --------->ANAC46         <---------YAB1 --MYB83--------->ARR14(2)     --------->YAB1   <---------AHL20(2)         --------->YAB1 <---------AHL20(2) --MYB46(1)                   <------ZmHOX2a(2) --------->AHL20(2)--------->YAB1       <---------AHL20(2) --->ALFIN1            ---------->DOF2      <---------AHL20(2) --------->ANAC58      <---------YAB1   gtaattcgcagatccaactatagtttaaagcgatcaaaacaaggttttaattaactaatgctcacaagtcataacaatagtggttttattattttaatat  4526600  Previous    Next  AGI:  At1g13245.1    Description:  DVL4/RTFL17 (ROTUNDIFOLIA LIKE 17). similar to DVL5/RTFL15 (ROTUNDIFOLIA LIKE 15) [Arabidopsis thaliana] (TAIR:AT1G68825.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42090.1); contains InterPro domain DVL (InterPro:IPR012552) Range:  from: 4525483    to: 4526061    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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