Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------YAB1                                                          --------->YAB1                                                      --------->MYB46(3)                                                 --------->ANAC58     <-----------GT1                             <---------ANAC55(2) ---------ATHB12                                 --------->ANAC46 -->PCF2  <----------DOF2        <---------KAN4(2)    <---------MYB52(2)                       <----- ->ARR14(2)                  --------->HSFB2a(2) --------->ANAC58  ----------->GT1         <---------ZAT14 --ARR14(2)                  <---------HSFB2a(2) --------->ANAC55(2)           --------->ARR11(3) ---   cactgattcacactttcacagtctaaagactcgagaacaatcgaaagactcaagtaacaaacatcaagattgtaaaaaaactatcttgtagtgagtagtg  4484200                                                                                    <-----------GT1                                                                                --------->ATHB12                                                                            --------->ATHB12                                                                            --------->ATHB51                                  --------->AHL20(2)                       <---------YAB1                            ----------->GT1                              --------->YAB1                            --------->ANAC58                             <---------ICU4            <---------YAB1  --------->ANAC58                             <--------HAHB4           <---------ARR11(3)--------->TOE2(3)                           -------->ATHB1            <-         --------->ICU4     --------->ANAC55(2)                          --------->ATHB51          <-       --------->YAB1       <---------ANAC55(2)                         <---------YAB1       --------      <-------TEIL<---------TOE1(3)                                     <---------ATHB51   ---------- ----ZAT6<---------YAB1    <-------TEIL  <-----------GT1                --------->ICU4--------->ANAC55(2) -------->HVH21   <---------TOE2(3)<---------AHL20(2)              --------->YAB1 <---------WOX13(1)   gtgacaaattcatgatttttgaggtttgatacgttatataatataaccaaaacttgtagcactctgcaaacacaattattattgatttacataacctgac  4484300                                                                                       <---------AtLEC2                       <---------ZAT6                                     <---------AHL20(2)                     --------->ZAT14                                      --------->AHL20(2) ---------DOF2       <---------ZAT14                                      <---------AHL20(1) --------MYB52(1)--------->ZAT6                                           --------->AHL20(1) --->HVH21    <----------DOF2               ------>ZmHOX2a(1)      ----------->GT1 <-------GAMYB----- ->RAV1(2)    ----------------------->TaNAC69(2)              ---------->DOF2     <-----------RAV1(1)   cctttgtttcaagagtctttcactactgtgagtctctacttctctcctacatgaagcctaaaaacaaagctgttaataaattcgctgttgcattgagaca  4484400                                                   <----------DOF2                                             --------->ANAC46                                             --------->ANAC58                                             --------->ANAC58                                            ------->GAMYB                                           <---------ALFIN1                         --------->ZAT14--------->YAB1                 <---------ANAC58          ----             --------->AHL20(2)        <---------ATHB12                <---------ANAC58         -----           --------->ANAC58           --------->ANAC58               <---------AHL20(2)--------->LBD16           ----------->GT1            --------->ANAC58           --------->AHL20(2)  <---------LBD16       ------->TEIL<-----------GT1   --------->WOX13(1)        --------->TOE2(3)    --------->MYB52(1) ------>GT1--------->ANAC58         --------->MYB46(3) <---------TOE2(3)           <-----------GT1   gtaagtatgcaccaagtaaataaactcttcagtattcaacaatcaacacccatctttaagaaaaacataaattacttggtcttaataaccggacagaacc  4484500                                               ----------->GT1                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                 ------->TEIL      <---------ARR11(3)              =============================HOX2a_HOX2a              ==============================HOX2a_HOX2a          <---------ARR14(2)       <---------AGP1          --------->ARR14(2)------------>CBF ---------->DOF2                     *TSS      <---------ATHB12   ----------->GT1   --------->TOE2(3)       <------------CBF ------>DOF2----------->RAV1(2)    --------->ARR11(3)           ------------>CBF<---------TOE1(2) ---->TOE1(2) ------>ZmHOX2a(1)    --------->AGP1    --------->WOX13(1)        ------>ZmHOX2a(1)   aaagactaatcaaatcctgaaccggtctggttcaatagatctaaacctaaagtataaatcaaacgtctcaattgttttttcctagggtttcaatctctct  4484600                                                                                    <---------HSFB2a(2)                                                              ---------->DOF2       --------->HSFB2a(2)                                                            ------>ZmHOX2a(1)       --------->LBD16                                                           --------->TOE2(3)   --------->ZAT2                                                           --------->TOE1(3)   <---------At4g35610                                                      <------NtERF2            <---------ZAT2                                                     ------>NtERF2             <---------GLK1(1)                   --------->TOE1(2)                 <---------ATERF1(1)       --------->At4g35610                   --------->TOE2(2)                 --------->LBD16 --------->At4g35610                --------->ARR14(2)                  --------->RAP2.3(3)        --------->GLK1(1)                <---------ARR14(2)                  --------->ATERF1(2)      <------NtERF2           <----------ID1                           --------->DEAR3(1)      <------NtERF2           --------->ANAC58       <---------MYB52(1)--------->RAP2.6(2)     --------->LBD16           --------->ANAC58      --------->LBD16    <---------ATERF1(2)    <---------DEAR3(1)           --------->ANAC46     --------->ANAC46   <---------LBD16   <---------At4g35610         ---------->DOF2       <---------LBD16     --------->RAP2.6(3)    <---------LBD16      --------->AtMYB61   <---------ICU4         --------->ANAC46    ----------->RAV1(2)   cccaaaaaccaaaacgcaaaacctccgataatgtccggcagtctaggtttaacgccggcatccttaaaggcatctggccggagctccgagaatgtcagtc  4484700                       --------->ANAC55(2)                       --------->O2                       <---------TGA1a           ----------->GT1              --------->ANAC46          <---------TOE2(3)             --------->ANAC55(2)          <---------TOE1(3)             --------->ANAC58    --------------->AGL15     --------->HSFB2a(2)    <---------------AGL15     <---------HSFB2a(2)--------->At4g35610   ----------------->AGL1     <-----------RAV1(2)--------->GLK1(1)   <-----------------AGL1----------->HVH21 --------->MYB52(1)                            ------>ZmHOX2a(2)   <-----------------AG--------->TGA1a  --------->ANAC58  --------->ATHB12         --------->LBD16 <-----------GT1       <---------O2     <---------ANAC55(2) <---------WOX13(1) --------->TOE2(2)   ttcttacccttcaaggtaaaatcaaacgtgacccagaaggttacgaaacagagctccaattgatttacaaacagttcaaaacctccgtcgatctcttcca  4484800                                                                                             --------                                                                         <---------ANAC58    <-------                                                                      ------>NtERF2          --------                                                                     ----------->HVH21       --------                                                                     --------->ETT(2)        <-------                                                                     --------->DEAR3(1)      --------                                                                    <------NtERF2            --------                                                                   <---------ATERF1(1)       <-------                        <---------ALFIN1                          <---------DEAR3(1)         --------                      ------>ZmHOX2a(1)                           <---------------ANT        ========               <---------GLK1(2)                              --------->ARR11(3)        --------->At4g35610       --------->ZAT2--------->ANAC46                     ---------->DOF2<---------ANAC58    --------       --------->At4g35610                ----------->HVH21   <---------ARR11(3)        <---------At4g35610       <---------At4g35610      <------NtERF2             ===========================================   tgaactagcagctctcagtttctcctccactggtggcattggctctgacccttctgtttcgaaagacctcggcgaccgtgccatgtttctagctcacgtt  4484900                         <---------ANAC58                         <---------ANAC58   <----------DOF2       <---------ANAC46 ->ANAC58               ------>NtERF2 --O2                   <------NtERF2 ->O2                  --------->LBD16 ->ANAC55(2)         <---------LBD16     <-----------GT1 --ANAC55(2) --------->ANAC46            --------->MYB52(1) ->ANAC58    --------->ANAC58    --------->ZAT2                     ----------->ARR10 ->ANAC46 --------->ANAC46       --------->At4g35610             <---------ANAC58 --TGA1a --------->HSFB2a(2)     <---------At4g35610             <---------ANAC58 ->TGA1a <---------HSFB2a(2)--------->ARR14(2)               <---------ANAC58 =============bZIP_DOF<---------DEAR3(1)--------->AHL20(2)   <---------ANAC58 <---------STY1(1) ->ANAC55(1) --------->ANAC58    <---------ZAT2          --------->SPL7       <---------LBD16      -- ==bZIP_DOF--------->LBD16  <---------ARR14(2)         --------->LBD16        --------->STY1(1)    <-   actcccttttacccgaagcaactcgcggcgtttccagctcaattaactggtttactccgtacttcgtgcttagctatgccctcggggcttcgaaaccata  4485000             ------>ZmHOX2a(2)    --------->ANAC58          --------->DAG2                       <-----------HVH21        <--------    --------->ANAC58    ------->TEIL                     ----------->GT1       <----------DOF2 ------->ZAT18       <---------ATHB12   <----------DOF2<---------WOX13(1) <---------ANAC58  <-------- --------ZAT18 ------>ZmHOX2a(1)     ---------->ID1  --------->ATHB12     <---------ANAC58  <--------   ttgcacaagctctgatccttctaatgaatcgaaaggtttgtgcttttatctgaattgattggaaaaaactgtcatttcttactttgtgtttgtggtgtgt  4485100  Previous    Next  AGI:  At1g13160.1    Description:  SDA1 family protein. similar to SDA1 family protein [Arabidopsis thaliana] (TAIR:AT4G31520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42472.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain SDA1 (InterPro:IPR007949); contains InterPro domain Region of unknown function, nucleolar NUC130/133, N-terminal (InterPro:IPR012977) Range:  from: 4484581    to: 4488574    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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