Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ------------>CBF          <---------AGP1               ---------->ID1             <---------ZAT2             <---------MYB46(3)       --------->ZAT2             <-----------RAV1(1)      <---------ZAT2            <---------AGP1          <----------DOF2      --------->At4g35610             <---------ZAT2       <---------ALFIN1        <---------At4g35610   --------->ICU4       --------->ICU4   --------->GLK1(1)         <---------HSFB2a(2)  <------ZmHOX2a(1)    <------ZmHOX2a(1)  --------->ARR11(3)   <---------YAB1 <---------At4g35610  <---------STY1(2)                 --------  <---------ARR11(3) --------->KAN4(1)--------->At4g35610  --------->STY1(2)                --------- ---AGL1  <---------DAG2     --------->HSFB2a(2)<---------TOE2(3)    <---------TOE2(3) ------------>CBF   ataagaactccacttttgttgcaatattcttgcagaagacagctagctctgaggaattagtagctagctctgaggaattagtagtctatttcaataaaag  4480500                                <---------AtLEC2                           <---------TOE2(3)                          <---------DOF5.7(2)                        --------->DOF5.7(2)                 --------->ANAC58                 --------->ANAC58                 --------->ANAC55(2)                 --------->ANAC55(1)                 --------->ANAC46                 <---------ANAC55(2) <---------ANAC58                           --------->ANAC46      <---------ANAC46 --------->TOE2(3)                                        --------->ANAC58      <---------ANAC58 --------->TOE1(3)  --------->AtLEC2         ---------->DOF2      <---------ANAC58----------->GT1<---------ANAC58           <---------HSFB2a(2)---------->DOF2 -->DOF2     <---------PCF2<---------TOE1(3)               <-----------RAV1(1)  --------->ANAC58 >AHL20(2)  ----------->HVH21  <-------TEIL          <------------CBF  ----------->GT1   atgaagtttcttgtgggacacgaaacgttaatgttcatggcttcatgctaatgcaaattgtatgttgcagaaagcgttacaaacgcaaagaatgcttcaa  4480600                         <----------DOF2                 <---------MYB46(3)                   <---------ICU4                        <-----------RAV1(1)                --------->YAB1                       --------->AHL20(2)               <-------TEIL                      <---------RVE1(1)                                  -            <---------ANAC58                    --------->ARR11(3)                          <--------            <---------ANAC46              --------->TOE2(1)                         <------ZmHOX2a(1)            <---------ANAC58      --------->WOX13(1) <---------AHL20(2)    --------->WRKY18(1)     --   aaaatgcaaaatttgcgttcatcatgtctttggtgacaatcaccttgtacgatatttatttgttgggatgttcaatggtcaagagaggatgggccgtagc  4480700             <---------YAB1            --------->AHL20(2)                   ------------------------>ANAC81  <---------ZAT14 -------->YAB1         --------->MYB52(1)        <----------ID1                   <---------ZAT18 -SPL7  <-------TEIL   <---------ALFIN1   ----------->GT1  ----------->GT1        --------->ZAT14  -- ------->ICU4<---------AHL20(2)  --------->PCF2---------->DOF2  ---------->DOF2   --------->ZAT18 ---   aagaatgaaattcatataataggcccaacggtttgggcccagaatgctaaaaagacaaaaaatgaaaaaagagaactcactgagtgaactcgagcatcgc  4480800                                                                           <------NtERF2                                                                          --------->LBD16                                                                         <---------ANAC46                                                                         <---------ANAC58         xxx                              <-------TEIL                               <---------ANAC58        <---                             --------->ARR14(1)             <---------ARR14(2)                  <----                             --------->CCA1(2)              --------->ARR14(2)                  -----                            <---------ARR14(2)              --------->ARR11(3)              ---------                            --------->ARR14(2)              <---------ARR11(3)       --------->ARR14(2)                            --------->ARR11(1)             <------ZmHOX2a(1)         <---------ARR14(2)              --------->ARR14(2)                         *TSS<---------CCA1(1) <---------GLK1(1)-----          ----------------->AGL1                      --------->ANAC46  <---------LBD16<-------TEIL ---------->CBF           ----------->ARR10          <---------LBD16  --------->ALFIN1--------->CCA1(2) --->NtERF2   <---------ARR14(2)          <---------WRKY18(1)<---------RVE1(1) --------->GLK1(1)<----   tgccaatggactgccatatcggagaagtgagatacgactctgtttgactgtttctcacggaggatatttccagtggcggagatttcagatacagtagagc  4480900              ------->TEIL           <---------ATHB12 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------------AGL15                 --------->At4g35610 -------------AGL2                 <---------At4g35610 ------------>AGL1              --------->LBD16 ->DOF2    <---------YAB1     <---------LBD16---------->DOF2                  --------->ATERF1(1) ------------>AGL2          --------->ARR14(2)       <---------ZAT14          --------->GLK1(1) -------------AGL3          <---------ARR14(2)       --------->ZAT14          <---------GLK1(1)------   caaaactggaacaatgaatgtcaaacttcgaaaccggagatgagacttaaagtacttcagtgagaattgtctccgatggggtctccgatggagtaagaga  4481000                                                                                                    -                                                                                                <----                  ----------->GT1                                                               -----               --------->ZAT2                                                                   -----               <---------ZAT2                                                                   -----               --------->At4g35610                                                             <-----           --------->HSFB2a(2)          <---------YAB1                                    --------->HSFC1(2)           <---------HSFB2a(2)      ----------->GT1                                       <---------HSFC1(2)          <---------LBD16  --------->ARR11(3)                        ----------->GT1      <---------HSFB2a(1)         <---------LBD16   <---------ARR11(3)                <----------DOF2         --------->HSFB2a(2) --->CCA1(2)   <---------At4g35610 ----------->GT1        ------->TEIL  ---------->DOF2   --------->HSFB2a(1)   tggtttcagtcttcgggagctggtcaaaagatttcaagagttaaaattggagagacgatgaagctttcgaagagtaaagttttctctctcgaattttcct  4481100                                           --------->ARR14(2) --------->DAG2                            <---------ARR14(2)                       <----------DOF2 --------->DOF2                            <---------ARR11(3)            --------->YAB1 -----HSFB2a(2)                            ------->TEIL                  --------->TOE2(3) ->ZmHOX2a(1)                             <---------CCA1(2)             <---------ZAT6 ---->LBD16                            <------------MYB.PH3(1)          ----------->GT1 ---->HSFB2a(2)                      <-----------GT1                   <---------TOE2(3) ----LBD16  <----------DOF2    <----------DOF2              <----------DOF2        <---------ICU4   ggaaaagtttgagtcttttcttagctctgtctccttttgtaactgtatcttcagtcttcaaactttgagttctaatgttaattcatcttttctcaacgtt  4481200                                                                                      <---------ANAC46                                                                                    <------MYB83                                                                                    --------->MYB52(2)                                                                                    <---------MYB46(3)                                                                                    --------->MYB55(2)                                                                                    <------MYB46(1)                                                                                   <---------TOE2(2)                                                                                   <---------TOE1(2)                                                                                  <---------MYB52(1)                                                                               ------>ZmHOX2a(1)            --------->YAB1                               --------->GLK1(1) <-----------GT1            <---------ICU4                      <---------YAB1          --------->ARR11(3)           --------->ICU4                   <---------DAG2              <---------AHL20(1) <---------ANAC58  <----------DOF2          <----------DOF2             <---------ARR11(3) <---------ANAC58--------->At4g35610    <---------MYB52(1)              --------->AHL20(1)   ttttcttgtgagaattatgagctttctattgttttgttatcccttactttactattgtgagttccagttttgaatattttcctcgttggtttgtaagtct  4481300                                                                           <---------ZAT6                                                                       <---------ANAC58                                                                       <---------ANAC58              <-------TEIL                                          <---------ANAC46           --------->YAB1                                        --------->ALFIN1   <---------ANAC46                                          <------ZmHOX2a(1)                      <   <---------ANAC58                                        <---------TOE1(3)                        -   <---------ANAC58       <---------YAB1               <----------DOF2 <---------ANAC46         <----  <---------ZAT2    <---------YAB1       <---------ATHB12  <---------TOE2(3)                    <----   tgttagcttggaatgatacattttgattatcaattggattccaatcttggagttgttctttaaggaagtggtgtcttgtgttagggagaacagatggatg  4481400  Previous    Next  AGI:  At1g13145.1    Description:  expressed protein Range:  from: 4480857    to: 4481331    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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