Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <----------DOF2                   ------>MYB46(1)                             <------NtERF2                   ------>MYB83                           --------->DAG2         <---------At4g35610                   --------->MYB52(1)         <---------ZAT2  ----------->GT1    --------->At4g35610                --------->MYB46(3) ------>ZmHOX2a(1)    ---------->DOF2      ------>MYB46(1)      ---               -------->P<---------ARR11(3)   <---------At4g35610    --------->ANAC58             <--              --------->MYB52(1)  --------->TOE1(3)   --------->ANAC58    <---------HSFB2a(1)    ----       --------->ANAC46  --------->ARR11(3)   --------->ZAT2 --------->ALFIN1------>MYB83   ---------      <---------TOE2(3) <---------GLK1(1)     ----------->RAV1(2)    --------->ANAC58       ---------   <---------WOX13(1)   --------->GLK1(1)     --------->At4g35610    --------->ANAC46 ---------->DOF2 ----DOF2   <---------MYB52(2)    --------->TOE2(3)   --------->ANAC58    --------->HSFB2a(1) -------   aagagattgacgaaactaaccaaacgatatctttatccttcaatacacagctggactcgaaaggtggcaaaacgaaaccttccatctgaaaagcccgaaa  4447000                   <------NtERF2       --------->ICU4      --------->ANAC58      --------->ANAC58<---------YAB1                                   <---------SPL7              -- ------>ARR11(3) <---------ANAC58                                --------->YAB1                    -- -------ARR11(3) <---------ANAC58                              ----------->GT1                     -- ----->YAB1      <---------ANAC46                     --------->ZAT18--------------->AtSPL3     ----- >ANAC58         --------->bZIP60(1)                  <---------ZAT18<---------------AtSPL8     <---- >ANAC58         <---------bZIP60(1)                <---------------AtSPL8                     <----- --->DOF2--------->TOE2(3)            <---------GLK1(1)   ---------->DOF2<-------TEIL      --------->ICU4   gataatgtaagcattaatggcgtcaacattgacaaatttgatttctctgaaattagggcacaaagaagtataacgtacagatagagagaggccatgagga  4447100                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                                                      <--------------                                                                  <---------YAB1    --------->ARR14(2)                                                                 <---------TOE2(3)  <---------ARR14(2)                                                                <-----------GT1    <---------ZAT2                                                         ----------->HVH21         --------->ZAT2  <-----------HVH21           <---------YAB1           <---------ANAC58            <---------At4g35610 ------->ANAC58             --------->CCA1(2)          ----------->GT1             --------->At4g35610 ------->ANAC46            <---------ARR11(3)          <---------ANAC58         ------->GAMYB ------->ANAC58            --------->ARR11(3)          <------MYB83           --------->ANAC58 ---->ARR14(2)             --------->ARR11(1)          <------MYB46(1)        --------->ANAC58 -----ARR14(2)         ---------->DOF2                --------->MYB46(2)      -------->P--------->LBD16 -ZmHOX2a(1)         ----------->HVH21                <---------DEAR3(1)    --------->MYB46(3)<------   cacgcttcacagaggctaaatgtgtgaaagatatgatcagaaaactctgatatagttcggtgacatttacgatttagaacaacccagctccgtgttaaac  4447200                              <---------DEAR3(2)                            <---------MYB52(1)                       --------->GLK1(2)     <----------DOF2   --------->ARR14(2) <---------ANAC58      <---------ARR14(2)              <---------ALFIN1                     --------- <---------ANAC58  --------->YAB1          --------->MYB46(3)                               <-------- ---------TaNAC69(2)  <---------GLK1(2)--------->MYB46(3) <---------DAG2          ------->TEIL -----GT1   <---------ICU4 <-----------HVH21      ------->TEIL      ------>ZmHOX2a(1)   <---------At4g35610   cttgcttcttttgatacttactcagaatccgtcggtcttcaaacaccagacgaaccctcaccttctcttcctccatcgtagacgaacttcagataagtaa  4447300                                         --------->TOE2(3)                                         --------->TOE1(3)                                      <---------ARR11(3)                                      --------->ARR14(2)                                      --------->GLK1(2)                           <----------DOF2------>ZmHOX2a(1)                                      ----                         <---------At4g35610---------->DOF2                                      ----             --------->ANAC58         --------->ARR11(3)      ---------->DOF2             --------->GLK1(2) -->GT1      --------->ANAC58         <---------ARR14(2) <---------At4g35610         ----------->GT1 -ANAC55(2)  --------->ANAC46 <---------ANAC46           --------->At4g35610  <------ZmHOX2a(1)------   aatgagagaaatttcactcaagttttgagctttcggagaaaatccttaaacccctgttgagctccaaagacggagaagaaggagaaggggagaaactgaa  4447400                                                                                          ===========                                                                                          <----------       ------>MYB46(1)                                                           --------->ANAC58       ------>MYB83                                       ---------->DOF2        --------->ANAC58     <---------MYB59                         <---------WOX13(1)           <---------------AGL15    *TSS --------->ZAT6                     <------------CBF             ----------------->AGL2    -- ----->ANAC58                              --------->ATHB12              ----------------->AGL1<----- ----->ANAC58                    ----------->GT1   <----------DOF2  ---------->DOF2---------->DOF2 <- ---->DOF2       <-----------HVH21        <---------YAB1 <---------AHL20(2) <---------CCA1(2)  ------   agccaaacctaacactctcgttcacagagaggttttagtaaaatatgattgggccttatttaaagcccatttaagcccatatcaagaaagcctcagatta  4447500                                                                                      ------>NtERF2                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.6(2)                                                                                    --------->ATERF1(1)                                                                                    <------NtERF2                                                                                    <---------LBD16                                                                               <---------bZIP60(2)                                                                         <---------AGP1 <------------CBF                                                                         <---------ARR14(2)                                                                   <------NtERF2    --------->RAP2.3(1)          --------->HSFB2a(1)                                    <---------DEAR3(1)<---------RAP2.3(1)          --------->ATERF1(1)                                   --------->ATERF1(1)<---------ATERF1(1)          --------->HSFC1(2)                                    <------NtERF2  <---------REM1(1)          <---------HSFC1(2)                                   <---------RAP2.6(3)<---------DEAR3(1)  <-----------RAV1(1)                                         --------->DEAR3(1)<-----------HVH21 <---------TOE2(3)                                          ------>MYB83 --------->ARR14(2) =============RAV                                           ------>MYB46(1)    <-----------RAV1(1) -RAV1(2) <---------HSFB2a(1)                               --------->At4g35610--------->bZIP60(1) ------->AHL20(2)                                           --------->ZAT2 ------>ZmHOX2a(2) ----AHL20(2)                      ---------->ID1         --------->MYB46(3)   <---------bZIP60(1) --------AHL20(2)    <----------DOF2             --------->At4g35610  <------NtERF2------>NtERF2----- --->AHL20(2)   ---------->ID1    <-----------GT1<---------At4g35610<---------DEAR3(1)<------NtERF2   attaatgttggagccttcgtcttctttttttttttttttccctctagcttaagctcaagaccagccgtcgtcgtcgatctgatgtcgccgcattgaaaca  4447600                     --------->YAB1                    <---------YAB1                                      <---------ANAC58                   --------->ARR11(3)                           <---------ZAT18                   <---------ARR11(3)                           --------->SPL7                  --------->YAB1                            <------NtERF2                 <---------YAB1                      <----------CDC5    <---------ANAC58               --------->CCA1(2)              --------->At4g35610--------->ANAC58                ----          ----------->GT1                     <---------At4g35610--------->ANAC58  <---------ANAC46          ------->GAMYB                      <-----------HVH21<---------SPL7       <---------ANAC58       --------->MYB52(1)               --------->GLK1(1)  --------->ZAT18         <---------ANAC58      <---------WRKY38(1)        <---------ZAT2     ----------------------->TaNAC69(2)    <---------MYB52(2) ----->DOF2--------->At5g28300   --------->ZAT2<-----------RAV1(2)    --------->AtLEC2   <---------At4g35610   aagaagaggcaacggtgatatgatcatatgcgtcgagctctgatatgcatcagacgctgggcgcagtacgccttgcataccgctcgcgtatagctaacct  4447700                                                           --------->MYB52(1)                                                           -------->P                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->ANAC58                                                   --------->ANAC58                                               <-----------HVH21                                              <---------ANAC58                                              <---------ANAC58              <---------WOX13(1)              <---------ANAC55(2)           <---------YAB1                     --------->ANAC46                    --------->YAB1      --------->MYB59           --------->ALFIN1   --------->ANAC58              <---------YAB1 ---------->DOF2              <---------At4g35610 --------->WOX13(1)           --------->YAB1 ------->GT1--------->ATHB12<-----------RAV1(2)<-----------TGA1          ------>ZmHOX2a(1)   <-------   cgttaaatcaggtatgattgacaacgctgttcaggtgttcgatgaaatgcgtcactcaagctaccgagttttctccttcgattataatcgtttcatcggg  4447800                                      <---------AHL20(2)                                      --------->AHL20(2)                                      --------->AHL20(1)                                      --------->ARR11(3)                           <---------ZAT2                           <---------At4g35610                        <---------ANAC58       --------->CCA1(2)                        <---------ANAC58      --------->ARR14(2)                  --------->CCA1(2)   <---------AHL20(1)  <---------MYB46(3)   <---------At4g35610    <---------ARR14(2)              <-----------HVH21 --LBD16   --------->GLK1(2)          <---------ARR11(3)                     --------->ANAC46      <-   gttttggttagagagtctagatttgagcttgctgaggcaatatattgggatatgaagcccatgggtttttctctcatccccttcacttactcaaggttta  4447900  Previous    Next  AGI:  At1g13030.1    Description:  sphere organelles protein-related. similar to hypothetical protein [Brassica rapa] (GB:ABQ50545.1); contains domain PTHR15197 (PTHR15197) Range:  from: 4444041    to: 4447404    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g13040.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42497.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 4447645    to: 4449198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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