Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->ANAC46                                                                                     --------->bZIP60(2)                                                                                 <------ZmHOX2a(2)                                                                                --------->AGP1                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                          --------->AHL20(2)                    <---------ARR11(3)                                     <---------TOE2(3)            <-------TEIL  --------->ARR11(3)                                    <---------DOF5.7(2)          --------->CCA1(2) <---------ALFIN1            --------->ATHB12        --------->MYB52(1)     ------>ZmHOX2a(1)   --------->At4g35610           <-------TEIL          <---------At4g35610       =============================HOX2a_HOX2a   --------->At4g35610           --------->At4g35610   <---------ARR11(3)---------->DOF2 -------GLK1(1)               ---------->DOF2 <---------ICU4---------->DOF2    --------->GLK1(1)   aaatctgatgcgattcattagcaaatcaaattgaaagctaacgattaaaaattccaaaatcctaaagatacaactaaaagcagatccacttcatgaatta  4439100                                     ----------->GT1                  <---------TOE2(3)  --------->ANAC58                 <---------DOF5.7(2) --------->ANAC58                                ---------->DOF2            --------->DAG2 <---------ANAC58                                   ---------->DOF2           ---------->DOF2 <---------ANAC58             <----------DOF2   <----------ID1  <----------ID1      --------------->AGL15--------->ANAC55(2)        ------->TEIL      <---------At4g35610      <---------------AGL15<---------ANAC55(2)   <-----------GT1        --------->At4g35610       ---      <----------DOF2    <-----------GT1    ---------->DOF2  <---------At4g35610  --------->TOE1(3)--   gagatttactttgaaaagtaaacgttgttacttactggcaagtaaacaaagttacgaactttgagctaattgggagaagacaaagcttaaagacgacgaa  4439200   <-------TEIL                                       --------->ANAC55(2)  --------->GLK1(2)                                   --------->ANAC58            --------->ANAC58  --------->ARR14(1)                                  --------->ANAC58            --------->ANAC58 <---------GLK1(2)                                    <---------ANAC55(2)  <---------TGA1a <---------ARR14(2)                                   --------->ANAC46     <---------O2 --------->ARR14(2)                                   --------->O2      <----------ID1 --------->ARR11(1)                                 <-----------GT1--------->AHL20(2)   ------->GAMYB ------>YAB1                                ----------->GT1        <---------AHL20(2)--------->MYB52(1) --------->ARR10 ----------->GT1   --------->MYB52(1) --------->ANAC55(1)  =====================MYC_MYB   tcagattcggacataagaagggtaatctctactcgagtaacagaagtagtaaaatcacgttacgaacaataaatgagacgagagaagcaacggagaaaca  4439300                                --------->TOE2(3)                                ----------->GT1                                --------->TOE1(3)                     <-------GAMYB                    <---------MYB46(3)                    ============================HOX2a_HOX2a                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                   =============================HOX2a_HOX2a                  <---------ARR11(3)                  --------->ARR11(3) ---------->DOF2     ----------->GT1          ------->GAMYB        ----------->GT1         <------ZmHOX2a(1)        >>>>>>>>>MYB98  <---------MYB46(3)           <---------TOE1(3)       ----------->GT1       --------->MYB52(1)     <---------TOE2(3)      <---------TOE2(3) <---------HSFB2a(2)          -      ----------->HVH21<---------TOE1(2) <------ZmHOX2a(1)      <---------ICU4             <---------CCA1(2)   gagtttcagtaacggagcaagatcgttggataaacgttaaaaaggatgcaaatttaaggaagaaaatcaatacccagaagagtgaaacgaatcaaatctc  4439400                                                                          --------->AHL20(2)                                                                     <--------P                                                                    <-------GAMYB                                                                   <------NtERF2                                                                  <---------MYB46(3)                                                                 <---------ANAC58                                                                 <---------ANAC58            <-------GAMYB                                     *TSS--------->LBD16           <---------MYB46(3)                                 ----------->HVH21          <------NtERF2                             <-----------GT1----------->GT1   --------->ICU4        <---------DEAR3(1)                   <---------AHL20(2)  <---------ANAC46 <---------AHL20(2)       --------->ATERF1(1)                 <---------CCA1(1)<---------ANAC58      --------->AHL20(2)       <------NtERF2               <---------WRKY18(1) <----------DOF2  <---------TOE2(3)      <---------RAP2.6(3)      ------->TEIL<---------RVE1(1)<---------AtLEC2    --------->ANAC55(2)     --------->DEAR3(1)    --------->SPL7 --------->ARR11(3)----------->RAV1(2) ----------->GT1 --------->DOF2          <---------SPL7   <---------ARR11(3)<---------ANAC58    <---------ANAC55(2)   taaaaagccgtcgtcgttgaaaactttcggacgaacttgactgagatttttttttttcttttgcctggcgggttaatgaattaagtaattaagaaggaaa  4439500                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                 <---                                                                                           ==========                                                                                           <---------ANAC55(2)                                                                                           <---------TGA1a                                                                                           --------->TGA1a                                                                                           --------->O2                                                                                           <---------O2                                                                                           --------->ANAC58                           ------>ZmHOX2a(2)                                               <---------bZIP60(2)                           ===============HOX2a_HOX2a                                      --------->ANAC58                          ================HOX2a_HOX2a                                      --------->bZIP60(1)                          <---------GLK1(1)                                                --------->ANAC55(2)                          <------ZmHOX2a(2)                                                <---------bZIP60(1)                          --------->GLK1(1)                                                ==========                         <---------ARR11(3)                                             ----------->TGA1                         --------->ARR11(3)                                             ----------->HVH21                     ---------->DOF2                                                   <-----------HVH21                  --------->AHL20(2)                                                  ===============                 --------->AHL20(2)<------ZmHOX2a(1)                                  --------->TGA1a               --------->YAB1 <----------DOF2                                         <---------O2  <         ----------->GT1 <---------AGP1                      --------->ZAT14          --------->O2---      ------------------------>ANAC81              =============================================bZIP_DOF     <------ZmHOX2a(1)  --------->RVE1(1)---------->DOF2     <---------ZAT14          <---------TGA1a     ============================HOX2a_HOX2a       ==================================================bZIP_DOF     =============================HOX2a_HOX2a      ---------->DOF2                ------>ZmHOX2a(2)<-   acagagaggatgagtaaaaataaaaaagatctctttaggattcaaaaggagagaaaagaacagcgaagtgtgtttttgaattgatcccatgtgacgcgac  4439600             --------->WRKY18(1)           <------MYB83          --------->MYB59 -------->ANAC55(2) ---------ANAC46 ---------ANAC55(1) ---------ANAC58 ---------ANAC58                    <---------ANAC58 ------SPL7<------MYB46(1)   <---------DAG2 ==============================bZIP_DOF                                                    <--------- ==============================bZIP_DOF  <---------ANAC58                      --------->ZAT14  <---- ==============================bZIP_DOF  <---------ANAC58        <---------ANAC46          ========== ---------ANAC55(2)          <----------DOF2    <---------TOE1(3)<---------ANAC58     =============== ------>MYB52(1)         --------->WRKY12<---------ANAC46        <---------ANAC58     ---------->DOF2 --------LBD16      ---------->DOF2 <---------ANAC58   ---------->DOF2         ---------->DOF2  <----   ttacgggttatgtaggtcaagagaaagttgactttttgacttggcttgtgaaggtactaaagccttggcttgtgaagacactaaagtctaaagctttggc  4439700                        --------->At5g28300                       ----------->GT1                     <-------PIF5                     <-------MYC4                     ------->PIF5                     ------->MYC4                     ------->MYC3                     <-------MYC3                     ------->MYC2                     <-------MYC2                    --------->PIF3(3)                    <---------O2                    --------->O2                    <---------PIF3(3)                    <---------TGA1a                    --------->ANAC46                    --------->TGA1a                <----------------PIF3(2)              ------>ZmHOX2a(2)      <---------TOE2(3)  ---------->DOF2 <---------ALFIN1   <---------TOE1(3)                ------>ZmHOX2a(2)  ============================bZIP_DOF        --------->ICU4        --------->ARR11(3) -DOF2 <---------MYB46(3)        ------>ZmHOX2a(2)                  <---------ARR11(3)       ------>ZmHOX2a(2) -----ANAC58--------->ARR11(3) --------->ARR11(3)                  --------->YAB1           >>>>>>>>> =============================bZIP_DOF    --------->At5g28300     <---------ATHB12       <---------YAB1 =============================bZIP_DOF   ----------->GT1      ------>ZmHOX2a(2)        --------->YAB1 -----ANAC58<---------ARR11(3) <---------ARR11(3)         <---------YAB1        <-----------GT1   ttactaaagtcgttgatcttccacgtggtaaatgatcttaaggctgtaattcttgggctcatgatccaatgatctagggttttaaacgctcatgatccaa  4439800                                                                              <---------At4g35610                                                                   --------->AHL20(1)                                                                   <---------ARR11(3)                                                                   <---------AHL20(1)                                                                   --------->ARR11(3)        ------>ZmHOX2a(2)                                         --------->CCA1(2)      --------->ARR11(3)                                <---------WRKY18(1)   --------->At4g35610      <---------ARR11(3)                               --------->WRKY38(1)  <---------ANAC58     --------->YAB1            ---------->DOF2         --------->WRKY12     <---------ANAC58    <---------ATHB12         <---------YAB1     <---------ANAC58 <---------ARR11(3) >>>>>>>>LFY <-------GAMYB --------->YAB1       <---------ANAC58 --------->ARR11(3)   tgtccaatgatctagggttgcatttgcagttataaaagaaacacattttggcttacattgaccaagagatatattttggcttctgagttttcagtgaaaa  4439900                                                     <---------TOE2(3)                                                     <---------TOE1(3)                                                    --------->MYB52(1)                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                         --------->YAB1                                         <---------ICU4                                        --------->ICU4 --------->TOE2(3)                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     <------ZmHOX2a(1)----------->GT1                          <-----                              <---------TOE1(2)  --------->At4g35610                           ------                              <---------TOE2(2) --------->GLK1(2)                              ------                 <-----------GT1   --------->MYB59<---------MYB52(2)                       <---------AHL20(2)              ----------->GT1------>ZmHOX2a(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->AHL20(2)        --------->YAB1 --------->AtMYB61<---------ATHB12         <---------WOX13(1)    ------>ZmHOX2a(1)   cactcgtctatgagaaatgttacaacctctcctatgttaggaatcatgagcatctaacgtaaaactaattgacaataagttaactcatcctattttatat  4440000  Previous    Next  AGI:  At1g13000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26440.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14680.1); contains InterPro domain Protein of unknown function DUF707 (InterPro:IPR007877) Range:  from: 4436103    to: 4439462    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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