Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->CCA1(2)                              <---------ARR11(3)                          ---------->DOF2                     ----------->RAV1(1)                    --------->bZIP60(2)        --------->CCA1(2)                    --------->ANAC58          <---------ARR11(3)                    --------->O2              --------->ARR11(3)                 <---------WRKY38(1)     <---------WRKY45                 <---------ZAT18         <---------WRKY38(1)                       <---------TOE1(2)                 --------->ZAT18   <---------AtLEC2                                <---------TOE2(2)      ----------------->AGL1  --------->ARR11(1)    <-----------GT1   ---------->DOF2    --------->ANAC58--------->ANAC58     <---------WRKY12            --------->AHL20(2)       <------    --------->ANAC58--------->ANAC46    --------->WRKY18(1)  ---------->DOF2  <-----------HVH21 <----   agaagtaggccatatggagtccacgacacaaagatttgaatggtcaaagatatataacaaaacaaaagaaataaaagagttgtcgcatgttcttatataa  4419400          --------->YAB1         <---------AHL20(2)         <---------YAB1                                                                     ---------      <---------AHL20(1)                                                                  <---------WOX13(1)      --------->AHL20(1)                          --------->TOE1(2)              <---------YAB1   <---------AHL20(2)      <---------YAB1        <---------ANAC58             <----------DOF2     ---   --------->AHL20(2)  <-----------GT1    <---------At4g35610                 ------>ZmHOX2a(1)   --- ---AHL20(2) <-----------GT1--------->ATHB51     <---------ANAC58      <-----------TGA1  <---------AtLEC2 -------GT1 <---------YAB1--------->TOE2(3)      <---------ANAC46     --------->YAB1   <---------YAB1   acgatttatatattataactgcattttacattattgtattgtttagccgagtcgtgcgaatggaatatcaaatcgtcatccttttgattttgaatgacaa  4419500                                                       --------->ANAC58                                                       --------->ANAC58        <---------ANAC46                                                <---------ZAT6               ----------->GT1  <------ >YAB1              --------->ANAC58   --------->AHL20(2)           <---------TOE2(3)--------->At4g35610 ------>YAB1        --------->ANAC46   <---------AHL20(2)           <---------YAB1   <---------At4g35610 ------>AHL20(2)    --------->ANAC58  --------->AHL20(2)           --------->YAB1 ---------->DOF2   ttatacagtaatggagacacacacacaaacatataaactattaaattctactgtgaaacgctaagtcaataagattaactggtgtaaagctgtctgatta  4419600                                                            --------->GLK1(2)                                                            <---------ARR11(1)                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                           ------>MYB83                                                         <---------MYB59                                                         --------------->AGL15                                                         <---------------AGL15                                                        ----------------->AGL3                                                        ----------------->AGL2                                                       --------->SPL7                                                     <---------SPL7                                                    <---------ANAC58                                                    <---------ANAC58 <----------DOF2                                                   --------------->AtSPL3          <-----------GT1                          <-----------GT1          <---------------AtSPL3         <---------AHL20(2)                       <----------DOF2             --------------->AtSPL8  <---------AHL20(2)                 <---------At4g35610               <---------------AtSPL8  --------->AHL20(2)                 --------->At4g35610            --------->SPL7    <---------ARR11(3)               <- ---WOX13(1)  ---------->DOF2                --------->YAB1------>MYB46(1)<---------AHL20(2)      ---   acaaaaacttaagtgtgaaagctgtcttttaccactcttccaaacactcgtaagtcgtaccaaatctagttctttatttattttttaatcgttctctata  4419700                                                                       -------->ATHB1                                                                       <---------ICU4                                                                       --------->ATHB12                                                                      <---------YAB1  <<<<<<<<<TBF1                                                            <---------ICU4        ------>ZmHOX2a(1)                                                           --------->ICU4     ------>ZmHOX2a(2)        ----------->GT1                          <---------ATHB12    <---------ARR11(3)    <---------    ---------->DOF2               <---------AHL20(2)     ---------->DOF2     <---------GLK1(1)  <---------AHL20(2)              --------->AHL20(2)    =============================HOX2a_HOX2a --------AHL20(2)               ----------->TBP<------------CBF     *TSS    <---------ARR11(3)     -- ------>AHL20(2)        <-----------GT1--------->YAB1   ------>ZmHOX2a(1)   --------->ARR11(3)   <---   ttatataaaagagaaaataaaactattaacttctatataattcataaaccattgattcctaaagattacaaaatcattgatctccttcttcttctttaac  4419800                                                                                     --------->At4g35610                                                                                   <---------WRKY12                                                                                  <------NtERF2                                                                                 <-----------HVH21                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------bZIP60(1)                                                                                --------->bZIP60(1)                                                                          --------->ARR14(2)       --                                                                      ------>ZmHOX2a(2)            --                                                                      ===============================                                                                      ===============================HOX2a_HOX2a                                                                      ============================HOX2a_HOX2a                                                                     ================================                                                                     ================================HOX2a_HOX2a                                                                     =============================HOX2a_HOX2a                                     <---------DEAR3(1)             --------->ARR14(2)           <---                                    <------NtERF2                   --------->GLK1(2)<---------At4g35610          <----------DOF2          <-----------HVH21   <---------ICU4<------ZmHOX2a(2)         ------ -DOF2   <------------------------ANAC81             --------->ARR11(3)   <---------ARR14(2)  <------ZmHOX2a(1) -------->DOF2          <----------DOF2<------NtERF2 <---------ARR11(3)  <---------MYB52(1) --------- -------DOF2      <----------DOF2 --------->ETT(2)  --------->YAB1  <---------ARR14(2)     <------ZmHOX2a(1)   tttaagcactctctttctctctttctctttctcttgtcgtcggagaatggagaaagataatgacttcaaggatccgtttctggcgtcaactgaggaggag  4419900                                                                                            <--------           ------>NtERF2                                                                    ---------          <---------ETT(2)                                                              <------NtERF2          --------->DEAR3(1)                                                           ------>NtERF2          ----------->HVH21                                                           --------->DEAR3(1)         <------NtERF2                                                                --------->RAP2.3(2)        --------->LBD16                                                               --------->RAP2.3(3)      --------->DEAR3(2)                                                             --------->RRTF1(1)      <---------LBD16                                                                --------->ERF1   <---------ALFIN1                              <---------At4g35610                 --------->RAP2.3(1) ------->At4g35610                               --------->At4g35610                ------>NtERF2 ------->ZAT2                       <---------ANAC46                               ------->GAMYB ===HOX2a_HOX2a                   <---------ARR11(3)                               --------->DEAR3(1) ===HOX2a_HOX2a    --------->DAG2 --------->ARR11(3)                              --------->DEAR3(2) ---ZmHOX2a(1)    ---------->DOF2 --------->ARR14(2)                    ------>ZmHOX2a(1)<---------ETT(2) --->ALFIN1<---------ATERF1(1)    <---------ARR14(2)               ---------->ID1 --------->MYB46(3) >ALFIN1<---------ATERF1(1)       --------->GLK1(2)     <-----------ARR10     ------>ZmHOX2a(1)   gagctcgacccggcgacccaaaaagcattgatggagtatcttggagtcggaagcagagcatcttctcttgtctccttctcctctaccgccgtcgatatcc  4420000                    <----------DOF2                                           --------->ICU4               <------NtERF2                                              ------>NtERF2             --------->ETT(1)                                     <---------ANAC58             <---------ANAC46                                     <---------ANAC58            <------NtERF2                                        <---------ZAT2           <-----------HVH21                                     --------->At4g35610        --------->LBD16                                          ----------->RAV1(2)      <---------LBD16  <-----------HVH21         ---------->DOF2 --------->ZAT2<---------ICU4 -GLK1(1) ----------->HVH21                   <---------HSFB2a(2)--------->STY1(2)               ---- >GLK1(1) --------->ALFIN1                    --------->HSFB2a(2)<---------STY1(2)<-----------GT1<---   ctccaatctccggtgtcggagactttgtcagagagtttagaatcgagtctagaaagctatggaaactagctggccctgccatttttacaacgatgagcca  4420100                 --------->ANAC58              <---------MYB52(1)              <------NtERF2             <---------RAP2.6(3)                                                         <------NtERF2             <-----------HVH21                                                          ------>NtERF2            --------->RAP2.3(2)                                    --------------------->WRI1            >>>>>>>>>AtERF-3                                 <---------ATERF1(1)        --------->LBD16            --------->RAP2.3(3)                              ------>NtERF2             <---------ATERF1(2)            --------->RAP2.6(2)                             --------->RAP2.3(2)        --------->DEAR3(1)            --------->DEAR3(1)                              --------->RAP2.3(3)        --------->ATERF1(2)            >>>>>>>>>AtERF-4                                --------->DEAR3(1)         <---------DEAR3(1)           --------->RAP2.3(1)                             --------->RAP2.3(1)        --------->DEAR4(2)           --------->ATERF1(1)                             <------NtERF2  --------->GLK1(1)           <------NtERF2                                   --------->DEAR4(2)         <---------LBD16          ------>NtERF2                                    --------->ORA47(2)         --------->ATERF1(1)          <---------ATERF1(1)  ----------->HVH21           --------->ATERF1(1)      --------->DEAR3(1)         <---------ARR14(2)    --------->LBD16            ------>NtERF2   <---------GLK1(1)<---------         --------->ARR14(2)   --------->DEAR3(1)          <---------ATERF1(1)   <---------MYB52(1)     <---------LBD16         <---------LBD16             <---------ATERF1(2)   <-----------HVH21 ----->ARR14(2)  --------->ANAC58                        --------->ATERF1(2)   <-----------TGA1     < ------ARR14(2) --------->WOX13(1)                       --------->DEAR3(1)   --------->ANAC46      <   atactctctcggagccgtcactcaagttttcgccggacatattagcactcttgctcttgccgccgtctccattgagaactccgtcatcgccggcttttca  4420200                                                             --------->HSFB2a(2)           <-------TEIL                                      <---------HSFB2a(2)         <---------SPL7                                      <---------ANAC55(2)       <---------------AtSPL3                                --------->ANAC55(2)       --------------->AtSPL8                             <---------MYB52(1)                    <----     --------->YAB1                                 <----------DOF2                        ------->TEIL    <---------YAB1                              <-----------GT1                           <---------AtLEC2 -DOF2 <---------------AtSPL8                   ---------->ID1                    <---------ARR11(3) ------MYB46(1)                                <-----------GT1                    --------->ARR11(3) ------MYB83                      ----------->RAV1(2) <-----------------AGL1 <-----------GT1<--------   tttggtatcatggtacgttttacattgatatgtctcccctgatcacatttttccctttctgttatggaacgtatacatttaacaaatcttttgcatctct  4420300  Previous    Next  AGI:  At1g12950.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT3G26590.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT5G38030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16105.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 4419768    to: 4422636    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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