Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->AHL20(2)                                                        --------->YAB1        <---------ARR14(2)                            <---------AHL20(2)    <---------LBD16                             --------->AHL20(2)             ------------>CBF ----ZmHOX2a(1)                                 <---------AHL20(2)  ----------->GT1 ----->ICU4<---------YAB1                   <---------YAB1         ----------->GT1 -----TOE2(3)   --------->DAG2     --------->ANAC46   --------->AHL20(2)     --------->ANAC58 -----TOE1(3)  ---------->DOF2   ----------->RAV1(1) --------->AHL20(2)      --------->ANAC58      -- >YAB1  --------->ARR14(2)  --------->YAB1 <---------TOE2(3)     ---------->DOF2              <------ZmHOX2a(1) -CBF  <-------GAMYB       <---------YAB1<---------AHL20(2)--------->YAB1  ---------->DOF2  <--------   ggattagccggttatgaaaaaggaagtttatcatcccacaaaatttatgtttaaattaaaataatagaaaaggaaataaaagccaatttcgactaaggaa  4389300                                                                                        ------------>CBF                                                                             --------->ARR14(1)                          <---------AHL20(2)                                 --------->CCA1(2)                          --------->AHL20(2)                                --------->ARR11(3)                         --------->AHL20(1)                                 <---------GLK1(2)       -                         <---------AHL20(1)                                 <---------ARR11(3)    <--                         --------->AHL20(2)                                 --------->ARR14(2)   <---     <-------TEIL        <---------AHL20(2)                  <----------ID1 <---------ARR14(2)  ----- --------->GT1      ------------>CBF         <---------WOX13(1)   --------->AHL20(2) --------->MYB46(3) -TOE2(3) <---------AHL20(2)  <---------AHL20(2)             ----------->GT1--------->ARR11(1) <-----   atggaaatacatttttttcagaaacaatttatttattctctaatttgagtgattttagcaaaaacgaaaaaaatacaagatttgctaacaaacaattctg  4389400                       ------>MYB83                       ------>MYB46(1) ---------->GT1        ----------->RAV1(1) -------WOX13(1)     <---------MYB59 ---------CBF        --------->MYB46(3)                                                           --- ---->ATHB12        --------->ANAC46   ---------->DOF2                                     <---------At4g35610 ----YAB1          ------------------------>ANAC81                   ------->TEIL          --------->At4g35610   attggctaaaactaaaaccaagacccaacaaaaaaaaaaaaaaaagacactagaaacgaattgaaagtttgaacctatatgaattcggttttcagcagtc  4389500         --------->ANAC46         --------->ANAC55(1)         --------->ANAC58         <---------O2         --------->ANAC58         --------->O2         --------->TGA1a         <---------ANAC55(2)                    --------->ARR11(3) --------->ARR14(2)         --------->ANAC55(2)          --------->YAB1               <---------ARR14(2)     --------->ICU4         <---------TGA1a              --------->ATHB51   --------->ZAT14                --------->YAB1 -------->GT1                      --------->WOX13(1)    <---------ZAT14             ----------->GT1   ttgtttaaaacacgtctcaagataagttttatagaatcaattatcgaatagttcttctctatagtggagaatactcgtgagataaaacagtaataagtca  4389600                                                                                       <---------AHL20(2)                                                                                   <---------AHL20(2)                       <---------ANAC58                                            --------->AHL20(2)                       <---------ANAC58                                           <---------AHL20(1)              <----------DOF2                                                     --------->AHL20(2)              ------>ZmHOX2a(1)                                                   --------->AHL20(1)            ------>ZmHOX2a(2)                                                     <---------AHL20(2)           <------ZmHOX2a(2)                      <-------TEIL                 --------->AHL20(2)          <---------GLK1(2)<---------ANAC58      --------->ARR14(2)            <---------AHL20(2)          --------->AGP1   <---------ANAC58   <---------TOE1(3)                --------->AHL20(1)          <---------ARR14(2)          <---------ANAC58                        --------->AHL20(2)          <---------ARR11(3)          <---------ANAC58                        <---------AHL20(2)          --------->ARR14(2)     --------->ARR14(2)                         --------->YAB1         --          --------->ARR11(3)     <---------ARR14(2)              <---------At4g35610   --------->AHL20(2)     --------->GLK1(2) <---------ANAC46       <---------TOE2(3)  --------->At4g35610  <---------AHL20(2)   aatacagaatcagatccttttagtgacttgcttcgaatttgcgttcttaaggttcttcttgtttttgagctctaacaaaaataatttatttattttcatg  4389700                                                         <---------DEAR3(2)                                                         <------MYB46(1)                                         <---------At4g35610                                ---------                              <---------At4g35610        <------MYB83                       ---------                              --------->ANAC55(2)       <---------TOE1(2)                   ---------                --------->AHL20(2)       --------->At4g35610 --------->REM1(1)  --------->LBD16       <---------AHL20(2)   <-----------RAV1(2)       <-------GAMYB            --------->ANAC46  --------->ICU4<-----------TBP ----------->HVH21*TSS<---------MYB46(3)       <---------LBD16 <------ ------->AHL20(2)         --------->CCA1(2) --------->At5g28300     ------>ZmHOX2a(1)--------->YAB1 <   tataaatattaaaactgattatatagagagacaggtgatagttagcagtgaatgctcgttggtacaactcctcattcttctccgcaaaaatagcaagtta  4389800                                                                --------->LBD16                                                               --------->HSFB2a(2)                                                               <---------HSFC1(1)                                                               <---------HSFB2a(2)                                                        <---------MYB52(1)                                                       --------->TOE2(3)  --------->MYB46(3)                                  ----------->GT1 >ANAC58                                             <-------TEIL                                   < -->GT1                           <---------AHL20(2)--------->GLK1(2)                             --- >ANAC58  --------->AHL20(2) --------->AHL20(2)     --------->ARR14(1)                            <-- ---ARR11(3)          <-----------GT1       <----------DOF2   <---------LBD16               --------- -----------GT1<-------TEIL  <---------AHL20(2)    <---------GLK1(2)        <---------AHL20(2)    <--   tttaacaaacaaaaaaattcatataaacgattttatttttttgtgacttttgagattcgttaattctggaaaatttgtttattttcaaaacaagaatatg  4389900        ---------->DOF2 -------TEIL ------>ARR14(2)                                              ---------->DOF2                       < -------ARR14(2)                                            --------->ANAC58        <---------MYB52(1) >GLK1(2)            --------->YAB1     --------->ANAC46    --------->ANAC58       <-------GAMYB <--- -------GLK1(2)     <---------YAB1  --------->AtLEC2  <----------DOF2             <-----------RAV1(1)   gattcgtcataaaagctaggctatgatcaacatgtttcatacaaacaagaacagggcttttcaagaaagtagcattctctgtttctgttgtctcaatccc  4390000                                                                          --------->ANAC58                                                                     --------->ANAC46                                                                    <---------TOE1(3)                                                                   <---------DOF5.7(2)                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             --------->ARR14(2)                                                --------->TOE1(1)--------->DOF5.7(2)                                   <---------MYB46(3)        --------->ARR11(3)                                  <---------DEAR3(1)         <---------ARR14(2)                                  <---------DREB2C(2)        <---------ARR11(3)                  <---                                <-----------HVH21----------->HVH21<---------WRKY45             ------                     <---------ARR14(2)        --------->HSFB2a(2)<---------WRKY12       <---------MYB52(1)                     --------->ARR14(2)        <---------HSFB2a(2)<---------WRKY38(1)  <---------ANAC58     <---------AHL20(2)<-------TEIL<---------DEAR3(2)  ==============HOX2a_HOX2a--------->MYB46(3) -- ---------YAB1      --------->At4g35610 <----------DOF2===============HOX2a_HOX2a      <---------ANAC58 -------DOF2<-----------RAV1(1)<-----------RAV1(1)     <------ZmHOX2a(1)  --------->ANAC58     <-----   ttttgattttttttgtgttggcagattcatcaaatgtcggttctttcttctcggacaggacgagatcgtcaacgttacgacaacaacttccgtctcgttt  4390100                                                          <---------ARR11(3)                                                          --------->ARR11(3)                                                          <---------ARR14(2)        <---------MYB111(2)                               --------->ARR14(2)        --------->MYB46(3)                                --------->GLK1(2)       ------>MYB46(1)                                    <---------ARR11(1)       ------>MYB83                                  --------->AtLEC2                    --------->YAB1      --------->ANAC46                             <---------ANAC58                  ---------->DOF2 ------LBD16      ----------->RAV1(1)              <---------ANAC58          <---------GLK1(1) --->ARR14(2)    --------->ANAC46       ---------->ID1   <---------CCA1(2)--------->ANAC58 ------------->AtSPL8       <---------ICU4         <---------ANAC46       --------->ANAC58 ----ARR14(2)  --------->ANAC46  <------------------------ANAC81          --------->ANAC46   ctgggtaccaacaacttacacaacaaaaaatcattttgttttgtttttttgtttcttgcaaatcttgaaaattttcaagaaaccccaaaaatcagaaaac  4390200  Previous    Next  AGI:  At1g12880.1    Description:  ATNUDT12 (Arabidopsis thaliana Nudix hydrolase homolog 12); hydrolase. Identical to Nudix hydrolase 12, mitochondrial precursor (NUDT12) [Arabidopsis Thaliana] (GB:Q93ZY7;GB:Q9LPW1); similar to ATNUDT13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13), hydrolase [Arabidopsis thaliana] (TAIR:AT3G26690.2); similar to ATNUDT13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13), hydrolase [Arabidopsis thaliana] (TAIR:AT3G26690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49119.1); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 4389749    to: 4391149    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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