Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------ZAT18                                                                                --------->ZAT2                                                                                <---------ZAT2                                                                                <---------At4g35610                                                                         <---------ICU4                                                                         --------->YAB1                                                                         --------->ATHB51                                                                         <--------ATHB1                                                                         --------->AHL20(2) ---------TOE1(3)                     --------->ANAC46                  <---------ATHB51 ----------RAV1(2)        ---------->DOF2                               --------->ICU4 ---ARR11(3)   ------>ZmHOX2a(2)      --------->ANAC58                  <---------ATHB12        ----- -->ARR11(3)  <---------YAB1          --------->ANAC58        --------->YAB1    --------->At4g35610--   ttcaggttttgttgtgatccttgtttttcaaagagagaacacaccaattcaaaaatgaatacaatcacagagcaataatttcagctcacaagactagaca  4357900                                                          --------->ZAT2                                                          --------->At4g35610               -------->P                                --------->ANAC58           --------->MYB52(2)                            --------->ANAC58           >>>>>>>>>>AtMYB44                           ---------->DOF2           --------->MYB59                            ------>MYB46(1)           --------->MYB111(1)                        ------>MYB83         <---------MYB52(1)                  <------ZmHOX2a(2)                                      <        ------------>MYB.PH3(2)             --------->ARR11(3)                        --------->MYB52(1)       <---------MYB46(3)                  <---------GLK1(1)   <---------MYB59--------->ZAT2    <---- ----->DOF2--------->MYB46(2)      <---------ANAC46   -------->P              --------->At4g35610---- -------->DOF2<-----------GT1    <----------DOF2 <------ZmHOX2a(1) --------->ZAT6  --------->HSFB2a(2)   aagaagcagtagttagttaccagattgaagtcgagcttcttggagagatcaggaccaacaagctccctaactctatcaacagcttcgataacagagttat  4358000                                                                            ----------->RAV1(1)                                                                           --------->DEAR3(1)                                                                           --------->AtMYB61                                                                          --------->MYB46(3)                                                                         ----------->RAV1(1)        <                                                                        <---------ALFIN1            -                                                                       --------->ZAT2           -----                                                                       --------->At4g35610<---------KAN4(1)                                                                       <---------At4g35610--------->HSFB2a(1)                                  --------->HSFB2a(2)                 --------->ANAC58    <---------HSFC1(2)                                  <---------HSFB2a(2)                 --------->ANAC58    --------->HSFC1(2)                        <-----------GT1                     --------->LBD16<---------ALFIN1--------->KAN4(2)                      ---------->DOF2                  <---------ANAC58<---------ZAT2     --------->KAN4(1) ---------ICU4     --------->TOE2(3)                   <---------ANAC58<------NtERF2      <---------HSFB2a(1) -----YAB1         --------->TOE1(3)         --------->MYB46(3) ---------->DOF2          <---------KAN4(2) ----->YAB1  ------>ZmHOX2a(2) <----------DOF2----------->RAV1(1)--------->DAG2--------->ANAC46 <----   caaaattatcgatgatcgaaaccttaaaaccatctttgagaagttgaacaacagtatgcgtcccgataaagccagcaccaccagtaacaagaatgttctg  4358100                                                                                              -------                                                                                            ------>MYB46(1)                                                                                            ------>MYB83                                                                                           ----------                                                                                           --------->MYB52(1)                                                                                          --------->MYB46(3)                                                                                          <---------MYB55(2)                                                                                          --------->AtMYB61                                                                                         --------->MYB46(3)                                                       <XXXXXXXXXXXXXXXXXXXXMIR866-5P  <---------ALFIN1                                                  --------->TGA1a                      --------->AtMYB61                                                  --------->O2                        --------->MYB46(3)                                                  <---------O2                      --------->ANAC46  --------->ANAC46                                <---------TGA1a                   --------->AtMYB61 ---------ALFIN1               ----------->GT1   ------>MYB46(1)                    <---------ALFIN1 ---------->RAV1(1)      >>>>>>>>>TBF1           ------>MYB83  <---------GLK1(2)   --------->MYB46(3) ---->At4g35610   ==========================================bZIP_DOF            <------ZmHOX2a(2) -----At4g35610   ---------->DOF2               <---------ALFIN1               <---------ARR11(3) <--   ctccacagaagaacccatttcaaagaagaagaaaggttatcaagaagaacccacttggcaaaatcgattctttgaaaactagatcaccaccaccaacaga  4358200                                                        <---------AHL20(1)                                                        --------->ARR11(3)                                                    ---------->DOF2                                                   <---------AHL20(2)                                              --------->ICU4                                              ------>ZmHOX2a(1)    <----------DOF2                                         <------MYB83<---------TOE2(3)                                         <---------ANAC58<---------CCA1(1)                          <                                         <---------ANAC58<---------RVE1(1)                          -     <---------ATHB12                   <---------MYB46(3)     ---------->ID1                   ----- >GAMYB                 <------ZmHOX2a(1)<------MYB46(1)--------->AHL20(1)                   -------- ->RAV1(1)      --------->ATHB12        --------->MYB59 <---------ARR11(3)                   -------- --------ID1  <---------WOX13(1)---------->DOF2    --------->AHL20(2)                        --------   agaacaaatgaagaagattgatgggaggaattgaaaaagagttgggtccttatttaaagatatttgtagctttgtttacaagttgataagaaggcacgca  4358300                                                                       <---------YAB1                                                                     <---------ICU4                                                                     --------->YAB1           <------                                                                  --------->YAB1          --------->YAB1                                                        --------->ANAC58                 <---------YAB1                                                        --------->ANAC58                 --------->ICU4                                                        --------->ANAC46               --------->YAB1                                                  --------->AHL20(2)<---------YAB1  --------->YAB1        ----------->GT1                           ----------->TBP--------->ICU4    --------->ICU4 ----------ID1       --------->ZAT18            --------->HSFB2a(2)--------->ARR11(3) <---------YAB1 ---------->GT1      <---------ZAT18            <---------HSFB2a(2)<---------ARR11(3) --------->ICU4 ----->DOF2      --------->ATHB12         <------MYB46(1)        <---------YAB1    <---------YAB1 ->ANAC58 <------ZmHOX2a(1)<----------DOF2<------MYB83 --------->RAP2.6(3)       --------->YAB1 ----- ->ANAC58----------->GT1  *TSS            <---------MYB46(3)   --------->YAB1   --------->ICU4------- ->ANAC46<----------ID1<---------PCF2 <-----------RAV1(1)     --------->ICU4  --------->YAB1<--------   aagcgaaaaataggaaaaatgagtgggctctttcatgtttttgttggtttctataaatacggcagtgatgatcatgacaacgatgatgatgatgatgatc  4358400                                                                                     ----------->GT1                                                                            <--------ATHB1                                                                            <--------HAHB4                                                                            -------->HAHB4                                                                            --------->ATHB51                                                                            <---------ICU4                                                                           --------->ICU4                                                                           --------->AHL20(2)                                                                           <---------ATHB51                                                                           <---------YAB1                                                                         --------->YAB1                                                                        <---------YAB1                                                ----------->GT1        --------->AHL20(2)                                             --------->YAB1         --------->ARR14(2)                                       --------->ANAC58             <---------ARR14(2)                                       --------->ANAC55(2)         <------NtERF2 ---------->DOF2                                       <---------ANAC46         <------NtERF2  --------->AHL20(2)          --------->YAB1               --------->ANAC58         <---------At4g35610 ----------->GT1 ---ARR14(2)                           <---------ANAC55(2)      <---------LBD16<---------AHL20(2) ->ZmHOX2a(2)                       <---------MYB52(1)        <---------DEAR3(1)<---------AHL20(2) -->ARR14(2)    <----------DOF2     <---------ARR14(2)       <---------LBD16--------->YAB1  <-------- -YAB1   <---------YAB1             --------->ARR14(2)  <----------DOF2<---------AHL20(2) --------->ICU4   cgtttaagtgtattatagctttgattcgtcgattttcagttacgcattgatggtgaaacttttctcggcggattttaataattaaaagggaaataatgta  4358500                                    <-----------GT1                           --------->YAB1                     --------->ANAC58                                              <------ZmHOX2a(1)                     --------->ANAC55(2)             <---------AHL20(2)     --------->TOE1(2)                     <---------ANAC55(2)            --------->AHL20(2)      --------->TOE2(2)                     --------->ANAC46  --------------->AGL15              <---------ARR11(3)                     --------->ANAC58  <---------------AGL15              --------->GLK1(2)                   <-----------GT1 <-----------GT1  <---------AHL20(2)    --------->ARR11(3) -TOE2(3) <----------DOF2 ----------->HVH21   ----------->GT1  <---------ZAT6  <---------TOE1(1)   agattaagtcttcttttttttttacgcaatgacatttttaacctatttttgtaaataaatgactagtgatgaccaaaatctacgaggattatgggaatac  4358600                                                                                           --------->ZAT18                                                                                           <---------ZAT18                                                                                    <---------TOE2(3)                                                                <---------DAG2      <---------TOE1(3)                             --------->ANAC46                   <----------DOF2    <---------DOF5.7(2)                     <------MYB46(1)                       <---------ATHB12        ---------->DOF2                     <------MYB83                         --------->ANAC46       --------->DOF5.7(2)     --------->AHL20(2)      --------->ANAC58            --------->WOX13(1)     --------->TOE1(3)  ----------->GT1  <--------P--------->ANAC58       --------->WRKY38(1)         --------->TOE2(3)   < ----------->GT1  <---------ANAC46              <---------TOE2(3)             ---------->ID1  -------   agagagataaattttctatgggttggataacacgctaaaaactggatagtaacgttgtccaatcaacttttttgtgttttttcgttaaagttgtccactt  4358700                                                                                           <---------DAG2                                                                                           ==========                                                                                       --------->REM1(1)                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                                  ------->TEIL                                                                                 <---------CCA1(2)                                                                               --------->ALFIN1                                                                             ========================                                                        <---------TOE1(3)    <---------ANAC58                                                 ======================================MYC_MYB                                                 ------>MYB83                <---------bZIP60(2)                                                 --------->MYB52(1)          <---------O2  <---------                        >>>>>>>>>ARR2            ------>MYB46(1)             <---------ANAC55(1)                        >>>>>>>>>ARR1            -------->P                  <---------ANAC55(2)                   --------->TOE1(2)            --------->MYB55(1)           <---------ANAC46                   --------->TOE2(2)           <---------MYB59 --------->YAB1<---------TGA1a            <---------TOE2(3)          --------->ZAT2   <---------TOE2(3)    <---------ANAC58      --            <---------TOE1(3)          --------->At4g35610    --------->ICU4 --------->O2 <----------       <----------DOF2<---------YAB1   <---------At4g35610    <---------YAB1----------->STF1      <--   <-----------GT1 --------->TOE2(3)   <---------ZAT14 <---------DOF5.7(2) <---------TGA2(2)      --- ---------ICU4    <---------ANAC55(2)  <---------ZAT2--------->DOF5.7(2)  ----------->TGA1=========== -->ANAC46 <-----------GT1  ----------->HVH21  --------->AtMYB61          ----------->HVH21----------   aatatttatcttttaacgatacctaagattgtgacagagacagcagagacctaccgataacgttatgatcaaattgatgacgtgtatctacaactttatt  4358800  Previous    Next  AGI:  At1g12780.1    Description:  UGE1 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 1); UDP-glucose 4-epimerase/ protein dimerization. Identical to UDP-glucose 4-epimerase [Arabidopsis Thaliana] (GB:Q42605;GB:Q9LPX1); similar to UGE3 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 3), UDP-glucose 4-epimerase/ protein dimerization [Arabidopsis thaliana] (TAIR:AT1G63180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63684.1); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Nu Range:  from: 4355924    to: 4358326    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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