Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------ANAC58                                                                           <---------ANAC58                                                                        <---------MYB52(1)                  <---------ARR14(2)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <------------CBF                                    <-----------HVH21              -----         <---------TOE2(3)                                       <-----------TGA1          <---------ARR11(3)        ---------->DOF2                                         --------->ANAC46           --------->ARR11(3)       <---------AHL20(2)                                       --------->ANAC58      xxxxxxxxxxxxxxx     <-----------TBP                --------->ANAC58          <-----------GT1     xxxxxxxxxxxxxxxxxxx   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->GLK1(1) --------->ANAC58  --------->MYB52(1)- <---------TOE2(3)--------->ARR14(2)--------->ANAC58  <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   attagggatttaaagtattggatttggggttttttgacaaacaatcgggtttctattaacctataaacgtcaccgtttcttgactaacagagagatacta  4334200                                                                    ---------->DOF2                                                                  ------->GAMYB                                                                 --------->ANAC46                                                                 --------->ANAC58                                                              <---------WRKY38(1)                                                              <---------WRKY12                                                              <---------WRKY45                                                             --------->DOF5.7(2)                                                            <-----------HVH21                                                           --------->O2                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                   <-----------RAV1(1)                          <---------MYB52(1)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <-------GAMYB        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <---------MYB46(3)  <---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)           <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) --------->ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------ANAC55(2)<---------DOF5.7(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ----------->GT1--------->bZIP60(2) ---->MYB52(1)      <---------ANAC58       ------>NtERF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxx>smallRNA(si3) ----------->GT1   <---------ANAC46<------NtERF2  <-------TEIL  <---------MYB52(1) xxxx>smallRNA(fl3) <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <---------AHL20(2) ---------->GT1--------->ATHB12      --------->MYB52(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  -----   acgggagaaaacgtcgtttattgggtctgttaatcgacttaacgacgcgtataatgtggcctcgtcaacgcaaagttcatgttttatttgttagtcaatt  4334300                                                                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                         --------->ANAC46                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                               <---------ANAC46                                                              <---------LBD16                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                               <---------------AGL15  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               xxxxxxxxxxxxxxxx>smallRNA(i)                                               ======================================================                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               --------------->AGL15 xxxxxxxxxxxxxxxx>smallRNA(i)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                              ----------------->AGL1<----------DOF2           -------                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 <------                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                --------                                          <---------WOX13(1) --------->ALFIN1                --------                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)     ---------->ID1     <---------TOE2(3)                  --------->ATHB12    --------->ALFIN1     <-----------GT1 ---->YAB1 --------->AHL20(2)          <---------YAB1   ---------->DOF2<-----------GT1     <---------ICU4   gtaagttgatgttttaaatagcttccatctaaattgacatattgattggccattttttgaaagttgggggatttaacgacatttttcccttcatatttat  4334400                 <---------SPL7                     <-------TEIL      <---------PCF2                               --------->CCA1(2)    <xxxxxxxxxxxxxxxxsmallRNA(i)                  <---------ARR14(2)   --------->ANAC55(2)                            --------->ARR14(2)   <---------ANAC58                              <------ZmHOX2a(1)   <---------ANAC58------->TEIL          <---------------AGL15   <---------ANAC55(2)              --------->MYB46(3)   <---------ANAC46--------->SPL7 ----------->RAV1(1) <-----------GT1<xxxxxxxxxxxxxxxxsmallRNA(i)   <---------TOE2(3) ========================================================MADS_MADS                      --------->YAB1 -->ATHB12<xxxxxxxxxxxxxxxxsmallRNA(i)  <-----------------AGL2                   --------->ANAC58 ---AHL20(2)   --------------->AtSPL3   <-----------------AGL3                   --------->ANAC46 ->AHL20(2)    --------------->AtSPL8 --------->GLK1(2)    ----------->HVH21     --------->ANAC58 ->ICU4  <----------CDC5  --------->YAB1----------------->AGL3    --------->ARR14(2)   <---------ATHB12   tagttacgggccctaagcccgtacccattcatagcccaacaatctattttaggatacagaaatgacaagtttcgctaattcacacacaaatgataagctt  4334500                                                                                <---------AHL20(2)                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                                             <---------AHL20(1)                                                                             --------->AHL20(1)                                   --------->YAB1                            <---------ARR11(3)                                  <---------ATHB12                           --------->ARR11(3)                          --------->MYB59                                   --------->AHL20(2)                     --------->AHL20(2)                                   ------>MYB46(1) --------->MYB52(2)                     <---------AHL20(2)                                   ------>MYB83<------MYB83                    <---------AHL20(1)                                  --------------->AGL15    <---                    <---------AHL20(2)          ---------->DOF2         <---------MYB59  <-------TEIL                    --------->AHL20(2)  <------------CBF             <-----------GT1  <------MYB46(1)   ggctaattcatacacaaactaatttaattaggctaaatcatacattgaacaaaagtattcttccgattagtttaccaaatatattatttggttcgtttga  4334600                                                        <------NtERF2                                                       --------->LBD16                          --------->LBD16       --------->STY1(2)             *TSS   <-----------GT1<---------At5g28300--------->DEAR3(1)                  --------->MYB52(1)         <-----------GT1 <---------ANAC46       --------->ZAT2>>>>>>>>>TBF1         ---------->DOF2      <---------CCA1(2)  --------->DEAR3(1)     <---------STY1(2)>>>>>>>>>TBF1<------ZmHOX2a(1) ------GLK1(1)   --------->YAB1   <-----------GT1    <---------LBD16       <------ZmHOX2a(1)   aatctcttatatcacggtttaataacgccgtggtattcactgttacgactagctcgccggagaagaagaagaatgaaggaggagaagaaagacgacggag  4334700                                                                                <------NtERF2                                                                               --------->LBD16                                                                               ------>NtERF2                                                                       <----------DOF2                                           <----------DOF2            ------>ZmHOX2a(2)                                          <---------ANAC58          <---------ARR11(3)                                     <----------DOF2              ------>ZmHOX2a(1)           <------                             <---------ARR14(2)              --------->KAN4(2)--------->ANAC46<------                             --------->ARR14(2)             <---------KAN4(1) --------->LBD16 -------                          --------->HSFB2a(2)               <---------ICU4   --------->LBD16  ------>MYB83                          <---------HSFB2a(2)        <-----------GT1--------->ARR11(3)    ------->TEIL        <------ZmHOX2a(1)<---------LBD16  <---------ANAC58  --------->KAN4(1)<---------LBD16  ------>MYB46(1)   taatggctgaggagaagccttacatgttctggatttggactttggcttctacgattttccgattattcctgatcttttccccggcaaatatcaacctatc  4334800                                              ------>NtERF2                                             --------->DEAR3(1)                                           --------->SPL7                                          <---------ARR14(2)                                       <------NtERF2                                       --------------->AtSPL3                                       --------->RAP2.3(1)                                       --------->ATERF1(1)                                      <---------ATERF1(1)                                      ------>NtERF2                                     <---------DEAR3(1)                                     --------->RAP2.3(2)                                     --------->DEAR3(1)                                     --------->RAP2.3(3)                                     --------->RRTF1(3)                                     --------->ANAC46                                    --------->DEAR4(2)                                    --------->ATERF1(1)                                    --------->ERF1                             ------>MYB46(1)--------->DEAR3(2)        <---------AtMYB61    ------>MYB83 --------->ARR14(2)      --------->LBD16   --------->ANAC46 <---------SPL1(2)     <---------HSFB2a(2)--------->ANAC58 <---------SPL7     --------->HSFB2a(2)--------->ANAC58--------->DEAR3(1)    <---------LBD16   <---------ALFIN1--------->ABI4(1)    --------->SPL7   ----------->HVH21<------------------SPL14  <---------SPL7    <-----------HVH21------------------>SPL14  <-----------HVH21--------->ANAC46 --------->ORA47(2) ---ARR14(2)     <---------ALFIN1   --------->RAP2.3(1)                                             < -----ARR10      --------->ANAC46  <---------ATERF1(1)                  ------>ZmHOX2a(1)           < -->ARR14(2)   <---------ALFIN1    <---------RAP2.3(1)               ------>ZmHOX2a(1)           ----   ttcccgtccggaggtctccacccctcacaccagccttcgccgccgtaccgcctctctctctctctctcatcctcctcgctctctcatacaatctctattc  4334900                                                                                              <------                                                                                              <------                    --------->ARR14(2)                                                     --------->ANAC58                    --------->GLK1(2)                                                      --------->ANAC46            <---------At4g35610                                                         <---------SPL7            --------->At4g35610                                                       <------NtERF2            --------->LBD16                                                          ------>NtERF2        --------->ARR14(2)   --------->MYB52(2)                                     --------->ETT(2)        <---------ARR14(2) <---------MYB52(1)          <---------TOE1(3)            <---------ETT(2) ---------ICU4      <---------ARR14(2)            --------->At4g35610        <---------YAB1--------->ANAC58 ---------GLK1(2)  <---------GLK1(2)           <---------At4g35610         --------->YAB1 --------->SPL7 ----->TOE2(3)   <---------YAB1                <-------GAMYB   <---------MYB46(3)<-----------RAV1(1)   cataatctcgattccgcttacgattctgcgtttgtttttgaatgttttcagttgctgaaggttactggttgaagcagtcatcactgtcgccatacgcagg  4335000                                                                               <<<<<<<<<TBF1                                                                              --------------->AGL15                                                                              <---------------AGL15                                                                             <-----------------AGL2      --------->ATHB12                                                       <-----------------AGL1    <---------WOX13(1)                                               ------->TEIL  --------->ATHB12                                                 <---------ZAT14                  - <---------YAB1                                                    --------->ZAT18           <------ZmHOX2a(2) ---TOE2(2)                  --------->GLK1(2)                    <---------ANAC46          <-------- ---TOE1(2)   <---------CCA1(2)                     ----------->GT1<---------ZAT18         <------ZmHOX2a(1)   tttgtgattgattcgtctatctacatatgagaatttgaaattccactattgtgcaagttaaaatcgtggtgtacttgtttcttcttctggtcaggatcaa  4335100  Previous    Next  AGI:  At1g12730.1    Description:  cell division cycle protein-related. similar to cell division cycle protein-related [Arabidopsis thaliana] (TAIR:AT1G63110.1); similar to Os02g0688900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047781.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63698.1); contains InterPro domain GPI transamidase subunit PIG-U; (InterPro:IPR009600) Range:  from: 4334613    to: 4337842    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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