Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------At4g35610       --------->HSFB2a(2)                                                                        ---  <---------AHL20(2)                                                                      <---------AHL20(2) ---->ID1        --------->At4g35610                                               <-----------GT1--- -DOF2 <---------HSFB2a(2)            ----------->GT1        ---------->DOF2 <---------MYB52(1)  <---   ctattttttttagaaaattagctgttttttttcagaaaataagaaaaaatttgatttgtttttcaaaggaaacaattcccttgtttttctattttttctc  4318000     --------->ZAT2     <---------ZAT2     <---------At4g35610        --------->YAB1     --------->At4g35610       <-------TEIL                                                       ---   <---------ALFIN1          <---------GLK1(2)                                               -------- ----------->RAV1(1)   --------->ZAT14                                                     ---------- <---------ALFIN1      <---------ZAT14                                                <---------AHL20(2) --->NtERF2    --------->At4g35610                                --------->ANAC55(2) --------->AHL20(2) ------>PCF2   <---------At4g35610----------->HVH21   --------->AHL20(2)         --------->At5g28300 --------TCP11(1)      --------->ZAT18         ---------->DOF2 <-------TEIL     ----------->GT1  ----   ggcccacagctgtattcagcacaagtgaacagattcatgacacctctacaaaagaataaaacatattcatgtaatttagtaactgtaattaaaaaaaggc  4318100                                             --------->YAB1                                            <---------YAB1                                           <---------ARR11(3)         --------->DOF5.7(2)      --------->YAB1        --------->TOE1(3)   <---------------AGL15     <-----------GT1        --------------->AGL15 ------>At5g28300    <---------AHL20(2) --------->AHL20(2)                                --------->ATHB51 ->DAG2 --------->TOE2(3)  ----------------->AGL2                           <---------AHL20(2) >DOF2<---------TOE2(3)  --------->ANAC46  --------->ARR11(3)            <---------ARR14(2) ------->GT1         --------->AHL20(2) --------->YAB1          --------->ATHB12   <---------CCA1(2)   tgtaattttacgttaatgcatatttatatgccataaacagaataatatcatactcacatcaaaaaatgaatgggggattttttttatatccattatcgaa  4318200                 <---------DAG2                 --------->TOE2(3)              <-----------GT1            <-----------GT1         <---------HSFB2a(2)            <---------ZAT18         <--------HAHB4             --------->HSFB2a(2)     <---------ARR11(3)         --------->YAB1          --------->ZAT6             --------->GLK1(2)         <---------ICU4       --------->WRKY38(1)      ----------->GT1                  --------->YAB1         --------->ATHB51 <---------YAB1           <---------TOE2(3)        <---------AHL20(2)-------        <---------YAB1 <---------AHL20(2)       <---------------AGL15     ----------->TBP  ----------        --------->ICU4 <---------YAB1      --------->TOE2(3)--------->ARR11(3)     ------------>CBF   ttatctcaccataattacaccttatattattgttgactctagaaatgttaactaatgtagaaaatctagagcacatatataaacaaacaataacaacaga  4318300               --------->ANAC58      <---------AHL20(2)               --------->ANAC58     --------->YAB1         <---------MYB52(2)        <---------YAB1        --------->ANAC46         --------->YAB1            <----------ID1        --------->ANAC55(1)     <---------YAB1  <---------ETT(2)                           <---------YAB1        --------->ANAC58 ------------>CBF       --------->ETT(2)                           --------->ICU4  <-----------HVH21      ------>ZmHOX2a(1)    --------->REM1(2) --------->AHL20(2)    --------->YAB1 >GAMYB --------->ANAC58--------->TOE2(3)  <----------DOF2 ----------->GT1       ------->GAMYB ->RAV1(1)     --------->ANAC46--------->AHL20(2)        ---------->DOF2 *TSS ----------->RAV1(1)----   gaccagtcacaagtaacacacaacttcctcaatttttataatattctttgtagacaaaaaaaagaaaaaaatatggagagcaacagaatggtgatgtttg  4318400       --------->YAB1                                       --------->TOE2(3)      <---------YAB1                <---------WOX13(1)      --------->AtMYB61    <---------ICU4                --------->ATHB12         --------->ANAC46    --------->YAB1               <---------YAB1          <---------ALFIN1                        <---   --------->ICU4           <---------HSFB2a(1)--------->At4g35610                         <---------TOE1(2)   <---------ATHB12         --------->HSFB2a(1)<---------At4g35610                         <---------TOE2(2) ------->HVH21            --------->GLK1(1)   --------->GLK1(2)          <----------DOF2  <----------   tgacaatgatgatagtgatggtaatgggaaaccttctgattgaaacagaagctgatgctccacctcaaccttctccttttaaaacttgttacccaggttg  4318500    >>>>>>>>>ARR2   --------->ATHB12               --------->GLK1(2)  <---------YAB1         <-----------GT1              ------>ZmHOX2a(1)             <---------REM1(2) ------ANAC46    <---------At4g35610                <---------ANAC46            ------>ZmHOX2a(1)   - -RAV1(2)        --------->At4g35610      <---------ANAC46                ------->TEIL              <   tgttttgattgtatcgttcagaagaaattaccaaagaatttgtggtgtccagtttcctgtatcaagacttgtcttgaacctccttcttcacagatggatt  4318600                          <-----------GT1                       <---------ICU4                      <---------YAB1                      --------->ICU4                 --------->YAB1                 <---------ICU4                --------->ICU4                <---------YAB1              --------->YAB1              <---------ICU4             <---------ATHB12           --------->WOX13(1)         <---------ATHB12<---------YAB1                  <---------ZAT18    --------->ANAC46<---------ICU4                       --------->ZAT14    --------->ANAC58-------->HAHB4                       <---------ZAT14             --------->LBD16    --------->ANAC58--------->YAB1                   <---------ICU4              --------->GLK1(2)  --------->MYB52(1)--------->ATHB12              <---------ICU4                 --------->ARR14(2) -------->MYB46(3) <---------YAB1                 --------->YAB1       ------>ZmHOX2a(1)        <---- ---------MYB52(2) --------->ICU4        <---------MYB46(3)       <----------DOF2<---------ARR14(2)   ccacaaacgaaatcaatcataatgattattactgcaaactaggttgttctactcatcactgcgcttccctttcctctatccaaaatccgagtaagtttct  4318700                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                                                      ===============                                                                                      --------->MYB52(2)                                                                                      <-----------RAV1(1)                                                                                    <---------ANAC46                                                                                    <---------ANAC58         --------->AHL20(2)                --------->YAB1                      <---------MYB46(3)     <---------TOE2(3)        --------->ATHB12                   <---------TOE2(3)  <---------ANAC58 ------DOF2         <----------DOF2      <-----------GT1      --------->ICU4<-----------RAV1(1)     <   tttgtataagattatatatggtcttttttggtttattgacatttatcaacataagattactgtatttatggtatttttgtgttgttgtttgtggcatgat  4318800                                 <-------TEIL                               >>>>>>>>>GATA-3    <---------ARR14(2)         >>>>>>>>>GATA-2    --------->ARR14(2)         >>>>>>>>>GATA-1   --------->At4g35610         <---------ARR14(2) <-----------RAV1(2)--------->ZAT18                                                      <---------YAB1 -->ATHB12  ---------->DOF2    >>>>>>>>>GATA-4              --------->ARR11(3)          <----------DOF2 --YAB1 <---------ETT(2)  --------->ALFIN1         <---------HSFB2a(2)           --------->ANAC55(2) ->ICU4 --------->ZAT18   <---------ANAC46         --------->HSFB2a(2)           <---------ANAC55(2) ============RAV    --------->ZAT14              --------->ZAT18            <-----------GT1       --- ---------At4g35610 <---------ZAT14      ----------->HVH21  <---------ARR11(3)  --------------->AtSPL8   ggagcagatgtggacaaagttgtggactgtgtggattcatgctcggacaagtgctcgaacaagaactagaagtgatattaactacgtactctttattgtg  4318900  Previous    Next  AGI:  At1g12672.1    Description:  Encodes a Plant thionin family protein [pseudogene] Range:  from: 4318373    to: 4318869    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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