Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->YAB1                                                            <---------YAB1                                                          --------->YAB1                                                         --------->ICU4                                                         <---------YAB1                                                       --------->YAB1                                                       --------->ATHB51            <---------ICU4                              --------->AHL20(2)       <---------ICU4              --------->YAB1                         ----------->GT1               <--------HAHB4             <---------ATHB12 ----------DOF2     --------->AHL20(2)                 -------->ATHB1             --------->ICU4 ----DOF2           <---------AHL20(2)                <---------ATHB12        --------->MYB46(3) ->ID1          --------->CCA1(2)                     --------->ICU4        ----------->RAV1(1) --GT1         --------->ARR11(3)          <-----------GT1<---------ICU4 ------->GAMYB --------ANAC81<---------ARR11(3) --------->YAB1      <---------ATHB51<-----------GT1<---------YAB1   ttcttttctaaatacgagatatatatatagtataaattatagttttttcttactcaattattattacaaaaataaccccaacaaatgatgacaaaaaaaa  4298500                                        --------->O2                                        <---------O2                                        <---------TGA1a                                        --------->TGA1a                                    ------->GAMYB                                  ================MYC_MYB                           <---------YAB1                                  -------->P   --------->DAG2                    --------->AHL20(1)                                 --------->AtMYB61                               <---------AHL20(1)                                --------->MYB46(3)  ---------->DOF2              --------->ARR11(3)                      ============================MYC_MYB                        --------->ICU4                     <---------ALFIN1   =================bZIP_DOF             --------->AHL20(2)                   ----------->RAV1(1)  =================bZIP_DOF    <---------ANAC46         ----------->RAV1(1) <---------ETT(2) ---------->DOF2  --------->MYB46(3)<---------ARR11(3)<-      --------->ANAC46------->GAMYB ==============MYC_MYB    --------->YAB1 <---------TOE2(3) <------   aaaaaaacccccaacaagagccaacacactttcgacaaccccaagtgagaaagtgaaagagaataacaactgtgtgttaagaaaatattagtgaaataac  4298600                  <---------ARR14(2)                  --------->ARR14(2)               <---------ANAC58               --------->ANAC55(2)                                                           --------               <---------ANAC55(2)                                   <----------DOF2         <-------               <---------ANAC46                             --------->AHL20(2)              <--------   <---------ANAC58                         --------->TOE2(3) --------->YAB1       --------->ANAC46   <---------ANAC58                         --------->TOE1(3)<---------YAB1    --------->CCA1(2) ---------DOF2 <---------ANAC58     --------->ZAT6         --------->YAB1     <---------ARR11(3) -----GT1<-------TEIL        --------->WOX13(1)           <---------ATHB51    --------->ARR11(3)    <   ccttttcttgattcatttcgtatttgaatatcaatctctcactaaaccctaactaattcaattataatcgtctttacagagatatacagaacacatatct  4298700                                                                                                   <-                                                            ------>MYB83                           --       <-----------GT1                                      ------>MYB46(1)                      <--- ->ARR11(3)                      <---------ANAC46    --------->YAB1                              ---- --ARR11(3) <-----------HVH21   <---------At4g35610 <---------ATHB12    ------>ZmHOX2a(2)        <--- -CCA1(2)  <----------DOF2  <-----------RAV1(1) --------->AHL20(2)    --------->ARR11(3)         ---- -----------GT1         <---------AHL20(2)      <---------AHL20(2)    <---------ARR11(3)         ====   atatactgtttacctttcagttctatatatatgtggctgatggtcaccatataaatcataccaaatgtccctgatcttaacccaaaacttcttcatcttc  4298800                        ----------->HVH21                      --------->ALFIN1                     <-------PIF5                     ------->MYC3                     <-------MYC2                     ------->MYC2                     <-------MYC3            ------->MYC4                     ------->PIF4            <-------PIF5                     <-------PIF4            <-------MYC4                     ------->PIF5            ------->PIF5                     <-------MYC4            ------->MYC2                     ------->MYC4            ------->MYC3                    <---------TGA1a          <-------MYC3                    --------->TGA1a          <-------MYC2                    <---------O2            --------->O2             <---------O2                   <---------O2             --------->bZIP60(2)            <--------ABF1             <---------ZAT2                 --------->TGA1a             --------->ZAT2                 <---------ANAC46             --------->O2                   <---------ANAC55(2)           <---------ALFIN1   --------->ARR14(2) --------AHL20(2)   --------->O2            <---------TGA1a ------->AHL20(2)  ------------>OsbHLH66   ------>NtERF2 -------DOF2------>NtERF2     <---------ARR14(2)                 <---------ANAC58 ----->TOE2(3)     <---------TOE1(2)      <---------ALFIN1       <---------ANAC58 ------------AGL15<------------OsbHLH66   <------------OsbHLH66--------->LBD16 ----------->AGL15<---------ALFIN1------>ZmHOX2a(1)            ------>NtERF2                     ---- =============================bZIP_DOF --------->ANAC46      <---------LBD16           *TSS <--------   tttaattagtttgccacctcgcacgtgtgacaaatccttcttcgccacgtgtgaaaacccttctccggcttgctactaatatacgactaatagtatgaat  4298900                                                      --------->GLK1(2)                                                     <---------GLK1(1)                    --------->MYB59                 <------ZmHOX2a(1)                    <---------TOE2(3)         <---------ZAT14       --------->ALFIN1                <------NtERF2                 --------->ZAT14     <---------O2               ------>NtERF2           <---------LBD16<---------ARR14(2)               <---------RAP2.6(3)     ------>ZmHOX2a(2)          <---------TGA1a                 ---               --------->LBD16         ====================HOX2a_HOX2a                         ------              <---------ATERF1(2)     =====================HOX2a_HOX2a                         <-----              --------->ATERF1(2)     --------->ARR14(1)      ----------------->AGL1      <---------ANAC46             <-----------------AGL1   <------ZmHOX2a(2)       <------NtERF2               <---------ANAC58             --------->RAP2.6(3)     --------->GLK1(2)--------->ARR14(2)                  <---------ANAC58             <---------LBD16         --------->ARR14(2)       <-----------------AGL1     <-------TEIL           <-----------RAV1(1)       --------->ARR11(3)   --------->LBD16               --------->GLK1(2)         --------->At4g35610         <---------ARR14(2)   --------->At4g35610          <---------GLK1(2)         <---------At4g35610 <------NtERF2  <---------ZAT14  ------>NtERF2             --------->ARR14(2)       <---------ANAC58     --------->LBD16 --------->ZAT14 --------->ALFIN1           <---------ARR14(2) ------->GT1 ----------------->AGL1 <------ZmHOX2a(1)--------->GLK1(1)              --------->LBD16 -YAB1 <---------ANAC58   <---------LBD16--------->LBD16<---------LBD16        <---------GLK1(1) ----   agttcaatggcttctgccggcttaggtagccggagaaaggatccggtgtacagaggaatccggtgccgaagtgggaaatgggtctccgagattcgtgagc  4299000                                                                  --------->ALFIN1                                                             <---------ATHB12                                                         <------NtERF2                                                        ------>NtERF2                                                       --------->RAP2.3(3)                                                       --------->RAP2.3(2)                                                       --------->DEAR3(1)                                                       --------->RAP2.6(2)                                                       ------->GAMYB                                                      --------->MYB46(3)                                                      --------->ERF1                                                      --------->RAP2.3(1)                                                     --------->At4g35610                                                     <---------At4g35610                                                     <---------ATERF1(1)                                                     --------->ZAT2                             <-----------GT1        --------->DEAR3(1)                    <---------ANAC58               --------->ATERF1(1)                         ------              <-----------ARR10                    --------->MYB46(3)                          ------              --------->ARR14(2)                  --------->At4g35610          <---------------AGL15 <------ZmHOX2a(1)  <---------ANAC58              <---------ZAT2<---------bZIP60(2)            <----- ------>LBD16<---------GLK1(2)-------->P          --------->ZAT2<-----------RAV1(1)           ------- --->At4g35610--------->GLK1(2)--------->ANAC46   <------NtERF2 <---------REM1(1)  ---------->DOF2 ----At4g35610<---------ARR14(2)                  <---------At4g35610<---------ANAC46<---------TOE2(3) ----->DEAR3(1)     <---------ANAC46     <------NtERF2--------->ATERF1(1)      --------------->AGL15<   cgaggaaaaccacgagaatctggcttggaacttaccccatggcagagatggcagcagccgcctatgatgtggctgctatggctcttaaaggaagagaagc  4299100                                                                                     <---------ZAT2                                                                                     --------->ZAT2                                                                                     <---------At4g35610                                                                                    ----------->RAV1(1)                                                                                   <-----------RAV1(2)                                                                                   <------NtERF2                                                                                  --------->At4g35610                                                                                 ----------->RAV1(1)                                                                                 --------->ANAC46                                                                                 --------->DEAR3(1)                                                                                 --------->RAP2.3(2)                                                                                 --------->RAP2.6(2)                                                                                --------->RAP2.3(1)                                                                                --------->ATERF1(1)                                                                               <---------ATERF1(1)                                                                               <------NtERF2                                                                               <---------ZAT2                                                                            <------NtERF2                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                            --------->ATERF1(1)                                                                         ------>NtERF2                                                                         <---------At4g35610                                                                         --------->At4g35610                                                                        <---------ATERF1(1)                                                                       --------->ATERF1(1)                                                                      <---------At4g35610                                                              --------->CCA1(2)--------->At4g35610                                                            --------->CCA1(2)  --------->ZAT2                                                            <---------GLK1(1)  <---------At4g35610                        <-----------HVH21                   --------->GLK1(1) <---------ATERF1(1)                      <---------DEAR3(2)               --------->At4g35610 ------>NtERF2                      <---------MYB46(3)               --------->ZAT2 =======================RAV                    <---------MYB52(1)                 <---------ZAT2 --------->At4g35610                   <-----------HVH21                --------->LBD16   ----------->RAV1(2)                 =============================HOX2a_HOX2a  <---------ARR14(2)--------->ATERF1(1)                 ------>ZmHOX2a(2)                  --------->At4g35610<---------DEAR3(1)                ==============================HOX2a_HOX2a  --------->ARR14(2)================RAV            <---------TOE1(2)                      --------->ANAC46   ==========================RAV            --------->LBD16                       <---------LBD16    --------->DEAR3(1)--------->RAP2.6(2)           --------->LBD16                  --------->YAB1 --------->ARR11(3)===================RAV          ----------->RAV1(2)          ------>ZmHOX2a(1)   <---------ARR11(3)<-----------RAV1(2) --->ZAT2 <---------ANAC46             --------->LBD16 <---------At4g35610 <---------RAP2.3(1) --->At4g35610 --------->ARR14(2)  <---------ARR14(2) ----------->RAV1(1)<---------LBD16    <-------- ----At4g35610 <---------ARR14(2)  --------->ARR14(2) ============================RAV--------->At4g35610 -->GLK1(2)<---------LBD16     <---------LBD16 --------->MYB46(3) XXXXXXXXXXXXXXXXXXXXX>MIR771 ---------ANAC46<------ZmHOX2a(2)--------->LBD16--------->ARR14(2)--------->ANAC46--------->LBD16   tgtcttgaacttccctggatccgtcgggtcatacccggttcctgaatcaacatccgcagcagatatacgagccgctgcggcagccgcagcagcaatgaag  4299200                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                             --------->O2      <-----                                                                             <---------ANAC46  ------                         --------->DAG2                                      <---------O2      ------                  <------ZmHOX2a(1)                                   <---------ANAC58        <------                 ----------->GT1                                      <---------ANAC58   <-----------RAV1(1)               <------ZmHOX2a(1)                                   <-----------HVH21   --------->YAB1      <------ZmHOX2a(1)---------->DOF2                            <---------ANAC58    --------->ICU4 -ATHB12     --------->ALFIN1---------->DOF2                      <---------ANAC58--------->ARR11(3)   ggatgtgaggaaggggaggaggagaaaaaggcaaaggagaagaagagtagtagttcgaagtcgagagcgcgtgagtgccacgtagataatgatgttggat  4299300                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              ------>NtERF2                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------          --------->ALFIN1                                                                  ---------        --------->ALFIN1                                                                    ---------        <---------ANAC58                                                                   <---------RAP2.3(1)        <---------ANAC58                                                                   <---------RRTF1(1)        <---------ANAC46                                     ------>NtERF2                 <---------ATERF1(1)   <---------ANAC46                                         --------->ATERF1(2)           <---------ANAC58 -->ZmHOX2a(2)                                            --------->ZAT2                  <---------RAP2.3(2) -----GLK1(1)                                             <---------ZAT2                  <---------ANAC58 ----ARR14(2)                                             <---------At4g35610         <-------GAMYB<- ----ARR11(3)                                             --------->At4g35610        <---------MYB46(3) --->ARR14(2)        <-------TEIL                        <-----------RAV1(1)        <---------YAB1<-- --->ARR11(3)<---------PCF2                        <---------MYB59               --------->ICU4------ ---CCA1(2) ----------->HVH21    >>>>>>>>>TBF1 --------->KAN4(2)               >>>>>>>>>NAM------>NtERF2   cttcgtcgtggtgtgggacagagttcatggacgaagaagaagtcttgaatatgcctaatctgctggctaatatggcagaagggatgatggttgcgccgcc  4299400  Previous    Next  AGI:  At1g12630.1    Description:  DNA binding / transcription activator/ transcription factor. Identical to Ethylene-responsive transcription factor ERF027 (ERF027) [Arabidopsis Thaliana] (GB:Q38Q39;GB:A0ME66;GB:Q9LN84); similar to AP2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52020.1); similar to DRE-binding protein 3a [Gossypium hirsutum] (GB:ABB45860.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 4298887    to: 4299473    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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