Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ----------------->AGL3     <---------MYB46(3)                             <-----------HVH21              <---------ANAC46                          <-----------GT1                   <---------ANAC58                     <---------AHL20(1)                     <---------ANAC58                     --------->AHL20(1)                     --------->O2               <---------ARR14(2)                     --------->AHL20(2)                     <---------O2              ------>MYB46(1)                     <---------AHL20(2)                     <---------TGA1a           ------>MYB83           --------->At4g35610   --------->ANAC58        ----------->TGA1           --------->AtMYB61           <---------At4g35610   --------->ANAC58        ----------->HVH21         --------->ANAC46          ------>NtERF2   >>>>>>>>>>GATA-1 ===========================bZIP_DOF   --------->REM1(1)         <---------RAP2.6(2) <-----------TGA1          <---------ANAC58          --------->ANAC46         <---------RAP2.3(3)--------->YAB1 ---------->DOF2  <---------bZIP60(2) --------->ZAT14      --------->ALFIN1  <---------YAB1   --------->YAB1<---------ANAC58 <-----------GT1--------->ARR14(2)   tacttgaaatgggggctgtctaatttattatcgtcacgaactataaaaagcttcttggtgtgacgttggataagtttccctctacaccaaatccacaagg  4282500                                             <---------AHL20(2)               ------>MYB46(1)              --------->AHL20(2)                                  -----               ------>MYB83  <---------HSFB2a(2)          <-------TEIL                          <----             <---------MYB59 --------->HSFC1(1)   --------->YAB1                          <----------   <--------HAHB4            --------->HSFB2a(2) <---------YAB1                <---------ANAC55(2)  <   --------->ATHB12      <----------DOF2    <---------AHL20(2)                 --------->ANAC55(2) --  <---------ATHB12    <-----------GT1       <---------AHL20(1)     --------->ANAC46 --------->ICU4 <-   tcgaatcatttagaacctaatagtttactttccagaatgctaacaatttttttgataacattcatttccacttaagacagtatgtaatgttttcacattt  4282600  <---------YAB1 ---->AHL20(2) -----AHL20(2)                                                --------->YAB1 -GT1       <-----------GT1                                   <---------AHL20(2) ---------AHL20(2)                             --------->ANAC58 ------->AHL20(2)                              --------->ANAC58                          <-------TEIL --------AHL20(2)  --------->GLK1(2)   ------->TEIL   --------->AHL20(2)               --------->YAB1   atttattattagattaacaaaattctatttcatcaaaaatgaattttgtaagcaaattgaatatttataagggaacttataagttccaatattcatggat  4282700                <------NtERF2               ------>NtERF2              --------->RAP2.3(3)              --------->RAP2.3(2)              --------->DEAR3(1)             --------->ATERF1(1)             <------NtERF2            <---------ATERF1(1)            <-----------HVH21           ========================================bZIP_DOF           <---------TGA1a           --------->O2              --------->AHL20(2)                                        ------           <---------O2      --------->TOE1(3)                           --------->DAG2    <---------YAB1           --------->TGA1a   --------->TOE2(3)              <---------YAB1               ----------->GT1    <---------ANAC58   <---------ANAC58  --------->DAG2     --------->ICU4   --------->MYB52(1)------    <---------ANAC58   <---------ANAC58 ---------->DOF2 ----------->GT1 ---------->DOF2  --------->YAB1   gaaatggcttctcgcgtcgccaatggcttaaccttagaattaaaaagtatgaagtaataggtataattagacaaaaaagtaagggtctgaattgtaataa  4282800                                                               <---------AHL20(2)                                                              <---------YAB1                                      --------->LBD16 --------->ANAC58                                    <---------LBD16   --------->bZIP60(2)                          <---------ARR14(2)          --------->ANAC55(1)                          --------->ARR14(2)       <---------REM1(2)                                <                       --------->ANAC58          ----------->HVH21   ---------->DOF2               --      <---------ANAC46 --------->ANAC58 --------->At5g28300  --------->AHL20(2)     ---------->DOF2<- --->AHL20(2)          --------->ANAC46--------->LBD16--------->ANAC58           >>>>>>>>>TBF1   *TSS --->YAB1            --------->ANAC46<---------LBD16  --------->ANAC46   ------------------------>ANAC81   aaaacttctcgtgaagtaagtaaacgcgaaactggttctcccggtaacaagttgacacggcatttttatttgaaagaagagaagaagaaagagagagaga  4282900                                                  <---------LBD16                                                ----------->HVH21                                  <-                                    <---------MYB52(1)                                           ----                                  <---------MYB46(3)                <----------DOF2             <----                                  <-----------RAV1(1)       --------->ZAT6                      ----- ------ZmHOX2a(1)               <---------At4g35610    <---------ARR14(2)                       ----- ------->ZAT18     --------->At4g35610 <---------ANAC58--------->ARR14(2)                   <-------- --------ZAT14     <---------At4g35610 <---------ANAC58<---------GLK1(2)        ---------->DOF2------   gaggactgggtctggtctcttcgctgcaacctatagctgttgtttgctcttcgacgggattctcactactcttttgccaaaaaaaagaggtatactttcc  4283000  ----------->GT1 --------GLK1(2)                                      <------MYB83 ----->LBD16                                          <------MYB46(1) -----HSFB2a(2)                                     <--------P                                      - ---->HSFB2a(2)                                  --------->MYB59                             <<<<<<<< ---->HSFC1(1)                                   <---------TOE2(3)                   ---------->DOF2< --DOF2                    <----------DOF2       <---------TOE1(3)                  <---------REM1(1) ----------->AGL1   ------->TEIL            <----------DOF2             <-----------GT1    --------->At4g35610   agaattgttcaaactcttgatgaatttctctttagaaaaaactcatctttttaggttggaattgattttgttttttacatttcaagttgaagcagttgga  4283100                                             <----------DOF2                                             <---------DAG2                                            <---------ANAC46                                            <---------ANAC58                                         ---------->ID1                                            <-                                        <-------GAMYB                                             <--                                       <-----------RAV1(1)                                        <--   <----------DOF2                     <---------MYB46(3)                           <---------AHL20(2)   <---------DAG2                      --------->MYB52(2)  <---------At4g35610      --------->AHL20(2) -------->ARR11(3)                  ------------>MYB.PH3(2)--------->At4g35610     <---------WOX13(1) <<AtWER       ---------->ID1  ------>ZmHOX2a(1)   <----------DOF2               --------->ATHB12 --- ---------ARR11(3)        <---------GLK1(2) <---------ANAC58                    --------->ICU4    ---   gagaactttatgctcttgttcttatctagattcctgcaagtttgttgctttttctttctgtagctaaatttaagtctctctagtgattaattcgatgcaa  4283200                                           <---------At4g35610      <---------MYB59          --------->LBD16                                              --------- --------AHL20(2)             <---------ANAC46                                      <---------ANAC46 -------AHL20(1)              <---------ANAC55(2)                                   <---------TGA1a -------AHL20(2)              <---------ANAC58                                      --------->bZIP60(1) ------>AHL20(2)              <---------ANAC58          --------->ATHB12            <---------bZIP60(1) ------>AHL20(1)     <---------ANAC46      --------->At4g35610                <---------AtMYB61   tttaatgacccaattcgagagttttgtgtattccgtagaattttgagctcaaaattcttcatttgagtctcaatcgagttttggtgatgtgagttagttc  4283300                                                                                                  <--                                                                                              <------       <---------ZAT14                            --------->ANAC58                       <---------ZAT2       --------->ZAT14                            --------->ANAC58--------->TOE2(3)      --------->ZAT2 >MYB52(2)            --------->CCA1(2)      <----------DOF2  <----------DOF2         ---------->DOF2   ttcgacctctgtagggaatttgagttatgggttttgttttcgattcactttcaagctaaattcgctttcattagtggaatgttttcatcaaagctggaat  4283400  Previous    Next  AGI:  At1g12580.1    Description:  PEPKR1 (PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 1); kinase. similar to CPK34 (calcium-dependent protein kinase 34), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19360.1); similar to CDPK-like protein [Solanum tuberosum] (GB:AAM29184.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 4282897    to: 4285827    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version