Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ICU4                                       <---------YAB1                                  --------->YAB1                                  <---------ICU4                               --------->YAB1<---------YAB1                              <---------AHL20(2)                             --------->AHL20(2)                                               -------                             <---------AHL20(1)                                <---------ARR14(2)                             --------->AHL20(1)       <----------DOF2   ----------->GT1      <-------                   --------->ATHB12  <---------ICU4  <---------DAG2 <---------YAB1 <---------ZAT6                  <---------YAB1 <---------YAB1   <-----------GT1<---------TOE2(3) ----------->GT1   actaatttagtcggaacattacgattggcaatataatcataatgtttatgaataaccttttggttctaatgttattgtgaaaatactgttaaaacatgat  4276100                                                                                      --------->YAB1                                                                                  --------->YAB1                                                      <---------AHL20(2)          -------->ATHB1                                                      --------->AHL20(2)         <---------ATHB12                                                    --------->YAB1               --------->ICU4  <---------AHL20(1)    --------->TOE2(3)         <---------AHL20(2)             <---------YAB1    --  --------->AHL20(2)   ----------->GT1            --------->AHL20(2)       <-----------GT1         --  --------->AHL20(1)   <---------ANAC55(2)     --------->AHL20(2)         --------->AHL20(2) <------- <---------CCA1(2)     --------->ANAC58 --------->ANAC58                 --------->AHL20(2) <-------TEIL -->ATHB12             --------->ANAC58 --------->ANAC58       --------->At4g35610--------->ATHB12 -- --YAB1      <---------YAB1           --------->MYB52(1)       <---------At4g35610<---------ICU4 ----   ttcatatattagtttatctttggaaacgtaaatagttgacaaacgacaatataaaaataaatgtctgctgttcaatttaactaatcattgaaaatacata  4276200                                        <---------ANAC46                                      --------->ARR14(2)        <---------WRKY12                                      <---------ARR14(2)     --------->bZIP60(2)                                      ------->TEIL           --------->ANAC58      ------->TEIL                 --------->ANAC55(1)       --------->O2   --------->ANAC58                --------->ANAC55(2)       --------->TGA1a   --------->ANAC58                --------->ANAC58          <---------TGA1a  <---------TOE2(2)                <---------ANAC55(2)       --------->ANAC58  ------->TEIL                     --------->ANAC58          --------->ANAC46  <---------TOE1(2)             <-------TEIL                --------->SPL7 ------->ANAC58              <------MYB83                   <---------TOE1(2) ------->ANAC46              <------MYB46(1)               <---------ALFIN1 --ANAC55(2)                 <---------DEAR3(2)          --------->ANAC58 ------->ANAC58             --------------->AtSPL3       --------->ANAC58 ------>DOF2 <<<<<<<<<<<<<<<<<LFY  --------->ANAC46   --------->ZAT2                   --------->TOE2(3)   aacgcacgtatatatagacattggatagagtcggtacacgtatcgtctatagaacctgctcgcacgtcaacttatactatattcaaaaacctcacttaaa  4276300                                                                                    ---------->DOF2                                                                              --------->ANAC58                       --------->AHL20(2)                                     --------->ANAC58                 ------>ZmHOX2a(1)     ----------->GT1                       --------->SPL1(2)                --------->TOE2(3)  <---------YAB1                            --------->SPL7        ==         <----------DOF2  <---------YAB1                                   <---------SPL7          --        <---------DAG2 --------->AHL20(1)                                <---------------AtSPL3 -----     <-----------GT1   <---------AHL20(2)            --------->AHL20(2) <---------ATHB12       <-----    --------->WRKY12  --------->AHL20(2)            <---------ATHB12    <------------------SPL14-----   caacaattgaccttttttcctaaattttattagtatttctattgaaaaaattcaatgaaatgaaacaaatcccaatcggtacggacaaaagtctccaata  4276400                                           --------->AtMYB61                                           --------->ZAT6                                           <---------ALFIN1                                          --------->MYB46(3)                                         ------>NtERF2                                        --------->RAP2.6(2)                                        --------->ANAC46                                  --------->ANAC46                                  --------->ANAC58                                  --------->TGA1a                                  ===========================MYC_MYB                                  --------->ANAC58                                  <---------TGA1a           <---------ARR14(2)                                <---------ALFIN1            --------->ARR14(2)       --------->AHL20(2)    ------>ZmHOX2a(2)       <-------GAMYB ===========================================bZIP_DOF<---------ANAC46        <---------GLK1(2) -------->DOF2      <------ZmHOX2a(1)  --------->MYB46(3)  <---------GLK1(1)>>>>>>>>>ARR1 ---->YAB1          ================HOX2a_HOX2a  <-----------RAV1(1)        >>>>>>>>>ARR2 ----ATHB12     ============================bZIP_DOF<---------MYB46(3)      <------------CBF ---->AHL20(2)  ---------->DOF2--------->LBD16 --------->ZAT14            <---------TOE2(3)   aaaaaggaattaaaaaaaaaaaggatagtgatccgcacgtagccaccactactgtcgttgaaaatcccctctatataagattgtctcaaattcgattact  4276500                                        --------->DAG2                                       ---------->DOF2              --------->ARR11(3)                                 ---------->DOF2                    <---------ARR11(3)<---------GLK1(2)                 *TSS         --------->YAB1           <---------PCF2         <----------DOF2   tcatcaaaaaacaaaccaaaaacaaaccctaagaataaagaaaaagaggctagaatgggtccaatctcaagttcttggagctttaacaaattcttctcaa  4276600                                                                               <----------DOF2                                                                            <---------ALFIN1                                                                         <---------O2                                                                         =================bZIP_DOF                                                                         --------->O2                                                                         --------->ANAC55(1)        <                                                                         --------->ANAC46           <                                                                         --------->TGA1a   --------->O2                                                                         --------->ANAC58  <---------bZIP60(1)                                                                         <---------TGA1a   <---------O2                                                                         --------->bZIP60(1)        -                                                                         --------->ANAC58  <---------bZIP60(2)                                                                         <---------bZIP60(1) --------                       ------>NtERF2                             --------->CCA1(2)         --------->TGA1a                       --------->LBD16                           --------->GLK1(1)         --------->bZIP60(1)             --------->ANAC46                  <---------ETT(2) <---------ARR14(2)         <---------TGA1a             <-----------GT1            <---------ARR14(2)      --------->ARR11(3)      ----------->TGA1      ---------->ID1  <---------DEAR3(1)--------->ARR14(2)      <---------ARR11(3)      ----------->HVH21      <---------MYB52(1)          <---------DEAR3(1)            --------->ARR14(2)  <---------LBD16<-     <-------GAMYB   <---------LBD16 <---------TOE1(2)        ----------->ARR10======================bZIP_DOF   tagttttcgttgttttcgccatctccggcgagttcgtcgctggatactatcgaccaggcccatggagatatgctcacgccactttctacggtgacgagac  4276700                     --------->ANAC58                     --------->ANAC46                 <---------ANAC58                 <---------ANAC58                 --------->ANAC58                --------------->AtSPL3 <---------MYB46(3)  --------->ANAC58 ----------->GT1--------->SPL7                      --------------->AGL15 ---------AtMYB61--------->ANAC58               --------->ARR14(2)             <---------HSFB2a(2) ---------DEAR3(1)  <-------TEIL  <-----------GT1   <---------------AGL15      --------->HSFB2a(2) -------->ALFIN1<-------TEIL <XXXXXXXXXXXXXXXXXXXXMIR1886.1             <---------TOE1(2) --->HVH21      --------------->AtSPL8          <---------ARR14(2)   ------>ZmHOX2a(2)         ------ --------MYB52(1)<---------ANAC55(2)           <----------TaMYB80    --------->MYB46(3)   <----------   cggtggtgaaaccatgggtacgtacacaacttcatttcacttctcttgcatataccatatgaagtcgatgatccaacgtttccagacatatatatccaca  4276800                                                                                                   --                                                                                                   --                                                                                                  XXX                                                                                            <--------                                                                                           <-------TEIL                                                                                           --------->ZAT18                                                       <---------ANAC55(2)               ------->MYC4                                                       --------->ANAC55(2)               ------->PIF5                                                      <-------TEIL                       ------->MYC3                                                    <---------ARR14(2)                   <-------MYC3                                                    --------->ARR14(2)                   <-------PIF4                                        --------->AHL20(1)                               <-------PIF5                                        --------->AHL20(2)                               ------->MYC2                                        <---------AHL20(1)                               <-------MYC2                           --------->DAG2    <---------At5g28300                         ------->PIF4                          ---------->DOF2   <-----------GT1                           <---------ANAC58                     <---------YAB1   <---------ARR11(3)                              <---------ANAC46 --->ANAC46   --------->DAG2          <---------AHL20(1)                              <---------ANAC58 -GT1        ---------->DOF2          --------->AHL20(1)                         <---------AtLEC2<---   cgattaacaaaaaaaaaaagtttatgaaaaaagtttccaaaatattttaccatggatacgtagtccatagcaatttttcatttgcattgcatgtgcattg  4276900                                                                                              <------                                                                                              -------                                                                                              -------                                                                                           <---------PCF2                                                                                           <---------ARR14(2)                                                                                         <-----------                                                                                       <-------MYC3                                                                                       ------->MYC2                                                                                       <-------MYC2                                                                             <------MYB83<-----------                                                                             <------MYB46(1) --------                                                                         <---------REM1(1) <---------SPL7                                                <----------DOF2   <---------AHL20(2)   ------->MYC3                                                <---------DAG2    --------->AHL20(2)<---------ANAC58                                             <-----------GT1    --------->AHL20(2)  <---------ANAC58    ----------->RAV1(2)         <------ZmHOX2a(2)               <---------AHL20(2) <-------TEIL   --------->SPL7      --------->ANAC58  <---------YAB1       <---------AHL20(2) --------------------   ------->TEIL     ----------->HVH21--------->YAB1           --------->AHL20(2)<---------MYB46(3) ------------->AtSPL8  --------->ANAC58 --------->AHL20(2)  <---------AHL20(2) --------->ALFIN1 ------------->AtSPL3  <---------ANAC55(2)--------->YAB1    --------->AHL20(2) <---------DEAR3(1) XXXXXXXXXXXXXXXXX>MIR171B/C   --------->ARR11(3)         <---------AHL20(2)<---------AtMYB61<-------TEIL -AtLEC2   --------->YAB1      <---------ARR11(3)         --------->AHL20(2)--------->MYB111(2)   --- --------GT1       <-----------HVH21<---------ATHB12   ------->TEIL   <---------AHL20(2)--------->ALFIN1   aaccgtacctgaatcacaatatgtcacgcataagatcaatgatataataactttatgtatatatatatatatataatgtaggtggtgcatgtgggtacgg  4277000  Previous    Next  AGI:  At1g12560.1    Description:  ATEXPA7 (ARABIDOPSIS THALIANA EXPANSIN A7). Identical to Expansin-A7 precursor (EXPA7) [Arabidopsis Thaliana] (GB:Q9LN94;GB:Q9LN88); similar to ATEXPA18 (ARABIDOPSIS THALIANA EXPANSIN A18) [Arabidopsis thaliana] (TAIR:AT1G62980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63638.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117) Range:  from: 4276517    to: 4277897    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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