Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->AHL20(1)             <---------ARR11(3)  <---------ANAC58  --------->ANAC46  --------->ANAC55(2)  <---------ANAC55(2)    <---------AHL20(2)  <---------ANAC46      --------->AHL20(2)  <---------ANAC58      <---------ATHB12                  ----------->GT1 --ANAC58    --------->ARR11(3)                   ----------->GT1                  <---------AHL20(2) --ANAC58  --------->AHL20(1)                <---------At4g35610                  --------->AHL20(2) --ANAC46  <---------ARR11(3)                --------->At4g35610          --------->TOE1(2)        <- --AtLEC2  <---------AHL20(1)         <---------------AtSPL3           <---------ALFIN1    <---------ATHB12   ttttgcgtaacaatatatattccctaataaatagccactaaatgtacagctcaagttaaatcgtttaaaatgcacaccttcgaaataaatctaatcgttt  4272700                       <---------ARR11(1)                       --------->ARR14(2)                       ------->TEIL                       <---------ARR14(2)                      <---------CCA1(2)                 --------->bZIP60(1)                      <---------ARR14(1)<---------TOE1(3)            <---------ANAC58                    --------->YAB1      <---------TOE2(3)        ---------->DOF2              --------->ANAC58         <---------DOF5.7(2)--------->ZAT18  <----------DOF2              --------->ANAC58         <-----------GT1 <---------TOE2(3) ---------->ID1         ----- --------ZAT6 --------->ANAC46    ----------->GT1  <----------DOF2   <---------ANAC58      ----------   agtattagtatcactcactcaatcgtatctttcgaatagtttaacgttgttttctttgaggtcactaaaaagcttgtcttttcaaagaataagttgaaaa  4272800                                <---------AHL20(2)                          <------MYB46(1)                 --------->ARR11(3)                 --------->ARR14(3)                 <---------ARR11(3)        --------->ANAC58  ----------->GT1             <---------ETT(2) ----------->GT1 --------->GLK1(2)            <------------CBF                                      < ---->AHL20(2)   <---------ARR14(3)        ------->GAMYB                                     -------- ->GT1  --------->ANAC58  <------MYB83  --------->MYB52(1) --------->GLK1(2)                 --------   aaatggtcataagaaacaaaatcttggatggtataaaatgactaacagcattgctgtcgaaattctgcatcaaaaaacaagagaattcatatagtaccca  4272900                                        --------->AHL20(2)                                      --------->ANAC58                            --------->ANAC46                                      ----------->GT1                     --------------------->WRI1                                      --------->ANAC58                    <------------CBF        <--                                   ------>MYB83                     --------->GLK1(2)         <------                                   -------->P   --------->DAG2     <---------GLK1(2)--------->ANAC58                                   ------>MYB46(1)                 <---------ARR14(2)  ------>MYB46(1)                                  ----------->RAV1(1)              --------->ARR14(2)  ------>MYB83--                                 --------->AtMYB61           <-----------GT1   <---------ZAT18<------ ---------GLK1(2)               --------->MYB46(3)        ------->TEIL   --------->ATHB12     <------ ->ANAC58                     ------->GAMYB --------->AHL20(2)  <---------HSFB2a(2) --------->ANAC46 ->ANAC58 <-----------GT1    --------->MYB46(3)---------->DOF2  --------->HSFB2a(2) --------->ANAC58   aaaattctcttattaccaaaacactcccataaccaccaacaagaaaataaaaagggcatgaattttccagattcttcattgttcacaccaaattttgctt  4273000     --------->ATHB12                          <---------YAB1    --------->ICU4                           <---------CCA1(2)                           --------->ZAT14 -------YAB1                             <---------ANAC58   --------->TOE1(3)            <---------ZAT14 ---ANAC46                               <---------ANAC58   --------->TOE2(3)            --------->ZAT18 ------->YAB1                            <---------ANAC46   <---------MYB59        --------->YAB1 ---ANAC58   <---------GLK1(1)           >>>>>>>>CAMTA3   ------->TEIL          --------->WOX13(1) ---ANAC58<---------TOE2(3)       ------>ZmHOX2a(1)      <---------ARR11(3)   <---------ATHB12 <-----   atgaaaatgatttagatttctctagtttgatcactccttcaacgcgtgtatcattccaagaacctaaaccatgtaatccagtcattcatagtgcagggat  4273100                                                                                                 <---                                                    ---------->DOF2                              <---                                                  <---------YAB1                               <-----                                                --------->YAB1                                 ------                                                <---------ICU4                    --------->At4g35610                                               <---------ATHB12     --------->DEAR3(1)     ----------                                               --------->ICU4     --------->At4g35610   --------->YAB1 -------CBF         <-----------HVH21 ---------->DOF2         <----------CDC5     <---------At4g35610   tgagaacgatggaagacaaaactgtgagacgaccatgacattaagcgaaatcatgaaaggagacgatgagccgaagaacaagagagctaaacataaagag  4273200                                                       <-----------GT1                                                    <---------ICU4                                                    <---------AHL20(2)                                                    --------->ATHB12          --------->ANAC55(2)                                                   <---------YAB1             <---------ANAC55(2)                                                <---------RVE1(1)             ----------->GT1                                                <---------CCA1(1)             --------->ANAC58                                               <---------ARR11(3)             --------->ANAC58   <----------ID1                              <---------AHL20(1)           <--------P ------ANAC58                                  --------->ARR11(3)        <---------TOE2(3) ------ANAC58                                <---------TOE2(3)          --------->DAG2 ----ARR11(3)    --------->ANAC58       --------->GLK1(2)              ---------->DOF2 --->ARR11(3)    --------->ANAC58      <---------ARR11(3)           <---------ANAC55(2) >DOF2 ---------->DOF2                 <---------GLK1(2)    --------->At4g35610  <-----------GT1   cttgagagacaaagaaggcaagaaaacacatctctattcaagattctaagatatttattgccatctcaatacataaaggtaagtaacattttcaaatttt  4273300                                                                          <---------LBD16                                                               <---------MYB52(1)                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         <---------ARR14(3)            <-----------GT1                                                         --------->ARR14(3)       <---------AHL20(1)                                                         <---------ARR14(2)       --------->AHL20(1)                                                         --------->ARR11(3)       <---------AHL20(2)                                 <---------AHL20(2)      --------->ARR14(2)       --------->AHL20(2)                                 --------->AHL20(2)      <---------ARR11(3)    >>>>>>>>>GT-2                  <---------At4g35610                   <---------HSFB2a(1)  --------->At5g28300        --------->GLK1(2)        <---------AHL20(1)     --------->HSFB2a(1) ----------->GT1    ------       <---------GLK1(2)  ----------->GT1      --------->AHL20(2)       <---------ATHB12       <-----   tcttatacaaattctgtctcatctcatgaagtcaaaaaatttctatagattatatagaagatccccttagtctaatcacggtaattaattaacaattgtg  4273400                                >>>>>>>ZML2                                --------->HSFC1(1)                        <------ZmHOX2a(2)                      --------->At4g35610                                          <------NtERF2                      <---------At4g35610                                          <---------At4g35610                   <---------At4g35610                                             --------->At4g35610                   <------NtERF2--------->HSFB2a(2)                            <-----------HVH21                 --------->ANAC46       --------->At5g28300              ---------->DOF2                <---------LBD16 <---------HSFB2a(2)                    <------ZmHOX2a(2)        <---------DOF5.7(2)     <---------HSFC1(1)           --------->HSFB2a(2) <---------WRKY12       <---------WRKY12--------->ARR11(3)           ---------->DOF2   <---------ARR11(3) ----->GT1      ===============HOX2a_HOX2a       --------->TOE2(3)    --------->ARR11(3) ---------->DOF2 ----ANAC46     ------>ZmHOX2a(1)      ----------->GT1       <---------HSFB2a(2) <---------WRKY38(1)   taaatagggtaaacgttcctcggcagatcacgttctagaagcagtgaattacatcaaagacttacagaagaagatcaaagaggtcagcgaaaaaagagat  4273500          ------>ZmHOX2a(2)          ===============================HOX2a_HOX2a         <------ZmHOX2a(2)         ================================HOX2a_HOX2a        >>>>>>>>>GATA-3                             --------->ATHB12        >>>>>>>>>GATA-1                            <---------YAB1        >>>>>>>>>GATA-2               <---------KAN4(2)   --------->YAB1                           <-        >>>>>>>>>GATA-4           <------ZmHOX2a(1)<------ZmHOX2a(2)                        ---------        <---------ARR11(3)        ========================HOX2a_HOX2a                      ------->TEIL        --------->AGP1--------->WOX13(1)          --------->ARR11(3)                    --------->ANAC58        --------->ARR11(3)       ----------->GT1  <---------ARR11(3)                    --------->ANAC58       --------->GLK1(1) --------->YAB1        --------->YAB1                <-----------RAV1(1)  <--   agaatcaagagatctattactcatccatcatcaagaggagaattttcaataagatcattagcatcatcaacttgttcttgtgttggagacacgaacattg  4273600  Previous    Next  AGI:  At1g12540.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein (bHLH125) [Arabidopsis thaliana] (TAIR:AT1G62975.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81995.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 4273135    to: 4274204    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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