Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------>NtERF2                                                                                    <---------ATERF1(2)                                                                                    --------->ATERF1(2)                                                                                    <---------RAP2.3(3)                                                                                    <---------DEAR3(1)                                                                        =============================                                                                        <----------DOF2                                                                     <---------ARR11(3)                                                                     --------->GLK1(2)                                                                     --------->ARR11(3)                                                            ---------->DOF2        --------->RAP2.6(3)                                                         ------>NtERF2 ------>ZmHOX2a(2)                                                      <---------At4g35610         --------->MYB52(1)                                                      --------->At4g35610        ----------->HVH21                                    <---------------------WRI1       <---------ARR14(3)                                   --------->MYB52(1)======================HOX2a_HOX2a                                  ----------->HVH21  ------>ZmHOX2a(2)<------ZmHOX2a(2)             -                      --------->ALFIN1              =======================HOX2a_HOX2a<------NtERF2 <                      ====================RAV       <------ZmHOX2a(2)--------->ARR14(3)            --                      <-----------RAV1(1) <----------ID1----------->HVH21       <---------MYB52(2) --            <---------ANAC55(2)--------->DEAR3(1)  --------->ARR11(3)<---------ARR14(2)       -------       --------->CCA1(2)      <-----------RAV1(2)  <---------ARR11(3)--------->ARR14(2)     --------- --->DOF2  <---------TOE2(3)----------->RAV1(1)---------->DOF2      <------ZmHOX2a(1)<---------RAP2.3(1)   gaaacagggatataacgtagcgaagtgttgccacagacgacggagagacaaaagatcgctgacaaagagaggatctttagaaactgacggcgagataaga  4264600                                                  <------NtERF2                                                  --------->RAP2.3(1)                                                 <---------DEAR4(2)                                                 <---------ERF1               <---------ARR14(2)                <---------RAP2.3(1)               --------->ARR14(2)                <---------ORA47(2)       --------->ALFIN1                          <---------RAP2.6(1)     <---------TGA1a                             <---------RRTF1(1)     <---------ANAC58                            ------>NtERF2     --------->O2                                <---------ATERF1(1)     <---------ANAC46                           <---------RRTF1(2)     <---------bZIP60(2)                        <---------RAP2.3(3)     <---------bZIP60(1)                        <---------RRTF1(3)     --------->bZIP60(1)                        <---------DREB2C(2)     >>>>>>>>>>AtbZIP1                <------NtERF2     <---------ANAC58                --------->LBD16     --------->TGA1a                <---------DEAR3(1)     <---------O2<---------LBD16    --------->ALFIN1            ------->MYC3   <---------TGA2(2)             <---------RRTF1(3)             <-------MYC3  ----------->TGA1<---------LBD16<---------RRTF1(2)     --------->YAB1                       ------->GAMYB  ----------->HVH21        <---------YAB1       <---------RAP2.3(2)                       --------->MYB52(1) ==============bZIP_DOF    --------->ICU4       <---------DEAR3(1)                        <---------DOF5.7(2) -------->At4g35610------>NtERF2 <---------RAP2.3(2)   <---------YAB1                  <---------ANAC58 ---------At4g35610--------->LBD16 <---------LBD16--------->ATERF1(1)              --------->ARR14(2) ------->ALFIN1--------->GLK1(2)<---------At5g28300<---------ANAC46                <---------ARR14(2) --------------------->TaNAC69(2)<---------RAP2.6(2)------>NtERF2--------->ALFIN1 --------->ATHB12 ---->ARR10 --------->ANAC58<---------ICU4      <---------ATERF1(2)            <------ZmHOX2a(1)   -- >CCA1(2)   --------->ANAC58--------->ATHB12    <---------RAP2.6(2)     --------->ICU4 <---------ANAC58   tgtgctgacgtggcacgattccggcgatattgattacggcggagctataggcggcgcatgataacatgtgtgtcatggtgaggaagattgggtaacggaa  4264700                                                                           <---------ANAC46                                                                           --------->O2                                                                         ------>NtERF2                                                                        --------->RAP2.3(2)                                                                        --------->RAP2.6(2)                                                                        --------->DEAR3(1)                                                                        --------->ANAC46                                                                       --------->MYB46(3)                                                                       --------->ERF1                                                                       --------->RAP2.3(1)                                                                  --------->YAB1                                                                 <---------YAB1                                                             <------NtERF2 <---------O2                                                             --------->ATERF1(1)                                                            <---------ORA47(2)                                                            <---------RAP2.3(1)                                                            ------>NtERF2<---------RAP2.6(3)                                                            <---------DEAR4(2)                                                            <---------ATERF1(1)                                                            <---------ERF1 <---------TGA1a         <-                                                           <---------RAP2.3(3)          <------MYB46(1)                                                           <---------RAP2.3(2)      <---------MYB46(3)                                                           <---------DEAR3(1)<---------MYB52(1)    --                                                           --------->ATERF1(2)      <-----------RAV1(1)               <---------ARR11(3)      ------>ZmHOX2a(1)   <---------ATERF1(2)   <------ZmHOX2a(1)---               --------->ARR11(3)<------ZmHOX2a(1)        <---------ABI4(1)--------->TGA1a   -------- ------->TOE2(3)              <------ZmHOX2a(1)        <-----------RAV1(2)<------NtERF2 <------MYB83<   accgtagtagaagagaaggtatttgtttaagaggaggactcctatatttgagccaaaccaggcggcgattatagccgccgtgaggattgttggtgatacg  4264800                                                                                                   <-                                                                                                  <--                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             ------>NtERF2                                                                                            <--------                                                                                            <--------                                                                                           <---------RAP2.3(3)                                                                                           <---------DEAR3(1)                                                                                           <---------ANAC58                                                                                           <---------RRTF1(3)                                                                                           <---------RAP2.6(2)                                                                                           <---------RAP2.3(2)                                                                                           <---------RRTF1(2)                                                                                       --------->ATERF1(1)                                                                                       <-------GAMYB                                                                                      <---------MYB46(3)                                                                                      --------->MYB55(2)                                                                                      <---------ATERF1(1)                                                                                     <---------ANAC46                                                                                     <---------DEAR3(1)                                                                                    ------>NtERF2<---                                                                                    <------NtERF2<---                                                                                   <---------RAP2.3(1)                                                                                   ------------>AtMYB77                                                                                  <---------RRTF1(2)                                                                                  <---------RAP2.3(2)                                                                                  <---------DEAR3(1)                                                                                  <---------RAP2.6(2)                                                                                 <---------ABI4(1)---                                                                                 --------->SPL7<-----                                                                              <---------MYB46(3)-----                                                          <---------ANAC58    <------MYB83 <---------ANAC58                                                          <---------ANAC46    <---------DEAR3(2)-----                                                          <---------LBD16     <------MYB46(1)<------NtERF2                                                          <---------ANAC58   <---------DEAR3(1)<-----                                                  --------->ALFIN1           --------->MYB111(2)<----                                                  <---------AtMYB61          <---------AtMYB61<------                                                <---------ANAC46             --------->MYB46(2)<-----                                               --------->ALFIN1              --------->MYB55(2)<-----                                               <---------AtMYB61             --------->MYB111(1)-----                                              --------->ZAT14                <---------MYB46(3)------                                              <---------ZAT14               <--------P<---------DEAR3(2) --------MYB46(3)          ----------->GT1    --------->ZAT18               <---------MYB55(1)<------ ------->MYB55(2)         --------->ALFIN1   --------->ALFIN1              <-------GAMYB   <---------ANAC46 ------>ALFIN1          <---------ANAC58   <---------ANAC46--------->LBD16--------->ATHB12<---------LBD16 ->CCA1(2) <------ZmHOX2a(1)        --------->At4g35610  <---------LBD16  --------->MYB55(2)<-------- ------NtERF2           <---------ANAC58  <------ZmHOX2a(1)<---------LBD16<---------MYB46(3)<--------   gtgggggaagagaggaagaagggtttgagtggtgaagaagcggaggagtgtggtggtgttccggggatgtctacgatggttggtgcggcggttgcggcgg  4264900     --------->TOE1(2)   <---------ARR11(1)   ------->TEIL   --------->GLK1(2)   --------->ARR14(2)   <---------ARR14(2)  <---------ARR14(1) -----NtERF2 ---------HVH21 ----->DEAR3(1) ----RRTF1(1) ----ORA47(2) ----DEAR4(2) -->DEAR3(1) ---RAP2.3(3) ---DEAR3(1) ->ATERF1(1) --ABI4(1) -ATERF1(1) -RRTF1(1) ------DEAR3(1) ------ANAC46 --->NtERF2 ----ATERF1(1)                     --------->ATHB12 ---->RRTF1(1)              --------->WRKY38(1) ---->RAP2.3(1)         --------->LBD16 ----RAP2.3(1)          <------NtERF2 --NtERF2               ------>NtERF2 ---RAP2.3(2)          --------->DEAR3(1) ----ERF1             --------->ATERF1(1)                  <---------ARR14(2) ----RAP2.6(1)       --------->LBD16     <---------At4g35610 ---->ATERF1(1)      ------>NtERF2--------->ICU4           --------->ARR14(2) >NtERF2            --------->ANAC46     --------->At4g35610 ---ANAC46          ------->GAMYB <---------YAB1        <---------ANAC46         --------->YAB1     < -RAP2.3(1)        --------->MYB46(3)<---------WOX13(1)<---------LBD16        --------->YAB1    <---- -ERF1   <------ZmHOX2a(1)  --------->WRKY12    <---------ATHB12        ----------->GT1   <----------   cgtcgaatctaggattgctcatccgccgcgttgtccatgattgagcttcaaccatttttcggataggggcgaaatgggaataacaataagtttttcttct  4265000                                                                ------>ZmHOX2a(2)                                                               --------->CCA1(2)                                                               <------ZmHOX2a(2)                                                              --------->AGP1          <---------HSFB2a(2)                                 <---------ARR14(2)          --------->HSFB2a(2)                                 <---------AGP1          <---------HSFC1(1)                                  --------->ARR14(2)    <----------DOF2                                           --------->ARR11(3)    <---------------AGL15                            <------NtERF2                                 <-    --------------->AGL15                  <----------DOF2    <---------ARR11(3)                -----   <-----------------AGL3                 *TSS      <---------MYB46(3)              >>>>>>>>>TBF1 <-- ----------DOF2                        <-----------GT1       <---------GLK1(1)   >>>>>>>>>TBF1 ------ ------DOF2              ---------->DOF2<-----------GT1 <------------CBF      >>>>>>>>>TBF1    <----- -GT1     --------->HSFC1(1) --------->ALFIN1      --------->ALFIN1       <---------ZAT14    <-------   ttctttctttttctagagagagagagagaaagtgtgagtttttatctttttcggtggggattgagatctgagtgagtgaagaagaagaagaaggaagatg  4265100                                                             ------>ZmHOX2a(2)       <---------DEAR3(1)                                  <---------ARR11(3)      <---------ORA47(1)                                   <---------ARR14(2)      --------->SPL7                                       --------->ARR11(3)    ----------->HVH21                                      <---------AGP1    <---------SPL7                                         --------->ARR14(2) --------AHL20(2)                           --------->YAB1<---------CCA1(2)                     ----- ---->ATHB12              <---------At4g35610 <---------bZIP60(1)                           --------- -------YAB1     <-------TEIL  ---------->DOF2<---------GLK1(1)                         --------->AHL20(2) --->ICU4       --------->GLK1(2)<---------TOE2(3)     <---------MYB52(1)               <---------AHL20(2) ----YAB1 --------->ALFIN1--------->At4g35610 --------->bZIP60(1)<---------YAB1     <---------YAB1 --At4g35610   <---------ARR14(2)<---------TOE1(3)   <---------MYB46(3)        ----------->GT1 ------   attaatcggacggtggagattcagatttagctgtaaaggtttagaatgatatcagccgttggatcttatagttggagggaattgttatatttaaaaataa  4265200                                            <-------TEIL                                           --------->ARR14(1)                                     <--                                           --------->CCA1(2)                                     <---                                          --------->ARR14(2)                                    -----                                          <---------GLK1(2)                                   <------MYB83                                          <---------ARR14(2)                                  <------MYB46(1)                                          --------->ARR11(1)                                 --------                                        <---------TOE2(3)                                    --------                                        <---------YAB1                                      <--------P         --------->AHL20(2)             <---------TOE1(3)                               <---------MYB52(1)     <---------AHL20(2)          <---------AHL20(2)                                     <-------GAMYB     --------->AHL20(2)         --------->AHL20(1)                                     <---------DEAR3(2) >>>>>>>>>>GT-3b                <---------AHL20(1)                                    --------->ETT(1) ----->DOF2 ---------->DOF2     <---------AHL20(2)                                 --------->ALFIN1 >YAB1--------->AHL20(2)        --------->AHL20(2)                                <---------HSFC1(2) --->AHL20(2) <----------ID1   --------->AHL20(2)                     --------->YAB1  <---------At1g77200   aagaaaaataaataaaaagacaaatctaagaaaattaattttaagattcgaagtcttgtgttcggagactaagcatgagtcagaagtgtcggtagtaggt  4265300          ------>ZmHOX2a(2)                                                <---------ICU4          =======================HOX2a_HOX2a                               --------->AHL20(2)         --------->ARR14(1)                                                <---------AHL20(2)         <------ZmHOX2a(2)                                                 --------->ATHB51         ========================HOX2a_HOX2a                              --------->ICU4        --------->ARR14(2)                                              <---------ICU4        --------->AGP1                                             <---------ATHB12       <---------GLK1(1)               <---------MYB59          <---------ALFIN1 -------ALFIN1                   --------->ANAC46            --------->ANAC58 ----TEIL--------->CCA1(2)    ----------->HVH21     <-----------------------TaNAC69(2) ---->TCP16(2)    --------->ANAC58   ------>NtERF2 --------->AHL20(2)   --------->YAB1  <----------DOF2 ->MYB111(1)      --------->ANAC58  --------->DEAR3(1)       --------->ANAC58   <-----------GT1 ->MYB59<---------ARR14(2)------>ZmHOX2a(1)  ----------->GT1 --------->ANAC46  <-----------GT1   ccacatttgagatccgatggaagcaatcctctatgacgcagcctaatttgtaattacatacaaaccccactcactaattatttagcctctcttttcaagt  4265400         --------->YAB1         -------->HAHB4                                                       --------->ANAC58         <--------ATHB1                                                    --------->ZAT14         <---------ICU4                                                 --------->LBD16         --------->ATHB51                                              <---------HSFB2a(2)      -----        <---------AHL20(2)                                             --------->HSFB2a(2)   --------        --------->ICU4                                           <---------YAB1         --------->AHL20(2)        <---------ATHB51                                         <---------TOE2(3)      <---------AHL20(2)        <---------YAB1                                       --------->TOE2(3)--------->ANAC46-------      --------->YAB1  <-----------GT1                        --------->TOE1(3)--------->ANAC58<------     <---------AHL20(2)             <---------ATHB51    <---------MYB59<---------HSFC1(1)    --------   tttgtttttaataattgtcccttaatacaatattagcaatagttgaaacacacattagcctaacattaacattccagaacacaccaaaaattaaaaaatc  4265500  Previous    Next  AGI:  At1g12500.1    Description:  phosphate translocator-related. similar to organic anion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G11320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63614.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 4263148    to: 4265042    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version