Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------O2                      <---------TGA1a                      ======================================bZIP_DOF                      --------->O2         <---------DAG2         <----------DOF2                                                --------->HSFB2a(2)         =======================bZIP_DOF               <---------HSFB2a(2)       --------->ATHB12    --------->DOF5.7(2)                                --------->HSFB2a(2)---------->DOF2           - ------>DOF2          --------->TGA1a            <---------DAG2         <---------HSFB2a(2)        <- >MYB52(1)    <-----------HVH21                  <----------DOF2<---------MYB52(1)             <-----   aaagacgtttacttttggtcactcacttgtctctgtctctaattctcttccctttttctaaaacccattagtttccaaaagtttgatttggacctcaact  4246800                                                       --------->YAB1                                                      <---------YAB1                                                <---------ARR11(3)            --------->ANAC58             --------->ANAC58  --------->ANAC58            --------->ANAC58             --------->ANAC58  --------->ANAC58        ------->GAMYB                    --------->ANAC46  --------->ANAC46     <-----------GT1              ------>MYB46(1) ------>ZmHOX2a(2) -------->AHL20(2)                ------>MYB83  --------->ARR11(3) --------ATHB12    <-----------GT1-------->P  <---------ATHB12              <---------ICU4<---------- ----MYB52(2)<---------ATHB12   <---------MYB59--------->YAB1   --------->AtLEC2       --------->YAB1   aatgaattaaccccaagcatttcacaaaatgaaacctactctcactcaatgatctcatcataagccatgtaacattcaacattgcctaaaaataactcat  4246900                    <-----------GT1             --------->ANAC55(1)                                         <---------ZAT14             --------->ANAC46                                            --------->ZAT14             --------->ANAC58                --------->ATHB12   <---------------AtSPL3    <-----------GT1<---------AHL20(2)        <---------ICU4     <---------------AtSPL8           <--- <---------ICU4--------->AHL20(2)           <---------YAB1    <---------AHL20(2)                <---- -GT1        --------->ANAC58      <-----------GT1           --------->AHL20(2)       --------->AtLEC2   tcattcttacttcacaagtaatttatcttactccaaataacatctcatcatttgaatcgaatattaaatgtacagttctctgttcatcatgcattcaata  4247000                                                                                                    <                                                                                                    <                                                                                                  <--       ------->GAMYB                                                                            <----      <---------MYB55(2)                                                                        <----      --------->MYB46(3)                                                                       <-----    <-----------GT1     <---------PCF5                                   --------->ANAC46      ------ ------YAB1     <---------TOE2(3)                  --------->AtLEC2   --------->ARR14(2)       ------ -----ARR11(3)  <---------YAB1<---------ICU4<-----------GT1           <---------ARR14(2)       ------   tgtttgtaaccaccaattgagattggggaccataactacttgtttttttcttcatgaaaaattgagaattcatatactccatttttgtgaaaagaattag  4247100                                 <------ZmHOX2a(1)                          <------MYB83                          <---------MYB46(3)                         <---------AtMYB61                         --------->MYB111(2)                         --------->MYB46(2)     --------->AHL20(2)  --------->MYB55(2) ------MYB46(1)          --------->MYB111(1) ------MYB83             <---------DEAR3(1)                        --------->ANAC58 ------P <---------AHL20(2) <---------REM1(1)                      --------->ANAC46 --MYB83--------->AHL20(2)<------MYB46(1)                          --------->ANAC58 --MYB46(1)              <---------MYB46(3)                 <-------TEIL ----TOE2(3)            <---------MYB55(1)                  --------->ZAT14 --->MYB46(2)           <--------P                      <---------------AtSPL3 --->MYB111(1)        --------->ATHB12                  <---------------AtSPL8              <-------TEIL --->MYB59            <---------MYB46(3)       <----------DOF2   ---------->DOF2  ------>ZmHOX2a(1)   gtagggattatttaatggcaaaaatggttggtgaaggagagaataaatgctttggtaagaagtacagacaagccagacactctcctccattacatacaca  4247200                       ------->PIF5                       <-------MYC3                       ------->MYC4                       <-------PIF4                       ------->PIF4                       <-------PIF5                       ------->MYC2                       <-------MYC4                       ------->MYC3     <------MYB46(1)                       <-------MYC2     <------MYB83                      <---------ANAC55(2)                      --------->ANAC55(2)                      --------->TGA1a  <---------MYB46(3)                      <---------TGA1a  <---------AtMYB61                      ===================================================bZIP_DOF                     <-------TEIL<---------------AGL15                    <------------OsbHLH66      *TSS                                                --                  --------->ANAC58     --------->MYB55(2)                                 --------->ZAT14                  --------->ANAC58 --------->ATHB12                       <---------AHL20(2)     <---            ====================bZIP_DOF<---------ANAC46--------->ALFIN1 <---------AHL20(2)   <------            ---------->DOF2    <<<<<<<<<TBF1  --------->ANAC58           --------->AHL20(2)<---------     <------------CBF------------>OsbHLH66    --------->ANAC58---------->DOF2             <---------ZAT14   tatagacgattgaacaaagcaggcacgtgcttcttcttcatttggtggaagccagagagtgtgagaaagactgaatttaatacattcaccagtttacttt  4247300           <---------ALFIN1         <---------ALFIN1    --------->ANAC46    --------->ANAC58    --------->ANAC58 ------->ANAC46                                                               <---------AHL20(2) --------------AGL1         <---------YAB1       <<<<<<<GRF7<------------------------ANAC81 ----DOF2--------->ANAC58   --------->ICU4     ----------->HVH21        ---------->ID1             <- --GT1   --------->ANAC58 --------->YAB1     ----------->RAV1(2)   <----------DOF2                 --   ccagccaaggcacacactctcttctctataatgcttagatgagactagcctgacaacaaattccttcttcttttgtccatttttttgttcaaaaacttgc  4247400                                                             --------->At5g28300                                      <---------ANAC58      <------MYB83           <------ZmHOX2a(1)                                      <---------ANAC46      ----------->GT1        <---------ICU4                                      <---------ANAC58      <------MYB46(1)      <---------TOE1(3)                                   <---------MYB52(1)       <---------DEAR3(2)   <---------TOE2(3)                                 <---------ANAC58          <---------MYB46(3) <---------MYB52(1)         ------->TEIL            <---------ANAC58         <---------ORA47(1)  --------->DOF5.7(2) --------ARR14(2)               ---------->ID1         <---------AtMYB61     <---------RAP2.6(3) ------->ARR14(2)          <----------DOF2           <----------DOF2 <-----------GT1         --------   aaatactcttgaatctgtgattctttcttcttttgtcgtttcttgagaatgttgactttggtcggtaaaattttctagccgttaaggatgactaagtaaa  4247500                         <---------MYB52(1)                        <----------DOF2                --------->ARR11(3)                <---------ARR11(3)                                     --------->At4g35610       --------->ZAT2  <---------DAG2  --------->ANAC58                <---------At4g35610       <---------At4g35610             --------->ANAC58                <---------ZAT2       --------->At4g35610  --------->At4g35610                <---------YAB1 ->AHL20(2) ---------->DOF2 <---------At4g35610 --------->MYB52(1)    ------->TEIL          <--------   tgcagaagcagctcaaaagttctcacctttagctcaatcccaagaaaaatcaacggttttgttttataaatgcagctacttgttcttggttctggtgtta  4247600                                                                                   <---------MYB52(1)                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                             <------ZmHOX2a(1)                                                                            ----------->ARR10                                                                            <------MYB46(1)                                 <---------ANAC58                         <--------P                                 <---------ANAC46                       <---------ANAC58                           <---------AHL20(2)                <---------ICU4 <------MYB83                  <---------At4g35610                  ------->TEIL     <---------ANAC46  --------->At4g35610                  <---------GLK1(1)   <-------TEIL--------->YAB1        <---------ANAC58  <---------At4g35610                  <---------ZAT2 <---------ANAC58<------ZmHOX2a(2)     --------->MYB59    --------->ZAT2 -ZAT6            --------->ZAT2<---------LBD16  ===================================HOX2a_HOX2a   gagaacaaatcccaatttggagctcgggtttaatttcgggttcgggtttggatcatgaaccgataatgtcaattgggtaggatccgtttatgagctgaat  4247700  Previous    Next  AGI:  At1g12460.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G62950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63605.1); similar to Os03g0127700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048834.1); similar to hypothetical protein OsI_009597 [Oryza sativa (indica cultivar-group)] (GB:EAY88364.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contain Range:  from: 4247247    to: 4250628    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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