Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------>NtERF2                                              --------->DEAR3(1)                                             <---------At4g35610                                             <------NtERF2                                             --------->At4g35610                                            <---------ATERF1(1)                                            --------->DEAR3(1)                                          --------->LBD16                                          --------->At4g35610                                         --------->ANAC46                        <-------MYC3    <---------LBD16                        ------->MYC3    ------>ZmHOX2a(2)                               <---------ALFIN1                     <---------ALFIN1 --------->ARR14(2)           <------ZmHOX2a(2)   <---------ZAT18             <---------ANAC58     <---------At4g35610  <---------YAB1             ---------->DOF2 -------------AtSPL8 ------->GAMYB--------->At4g35610  <---------------AGL15    --------->HSFB2a(2) ------------>AtSPL8--------->MYB46(3)<---------ARR14(2)          <---------ARR11(3)   --------->ZAT18 -->AtSPL8   <---------ANAC58  <---------At4g35610     --------------->AGL15    <---------HSFB2a(2)<-   atagtactcacttgttcgtgcaaccacatgtagagcagatgatccgcagcgccatttctgattttagagatcaaaactcttacgagaagcccacttctta  4222600                                                                                <---------WOX13(1)                                                                                <--------P                                                                              <---------MYB46(3)       --------->bZIP60(1)                                                    <------MYB83       <---------bZIP60(1)                                            --------->TOE1(2)       --------->ANAC46                                              ------>ZmHOX2a(2)  <---------bZIP60(1)                                               <------ZmHOX2a(2)  --------->bZIP60(1)          <----------DOF2              --------->ATHB12  <------MYB46(1)  --------->ANAC46<---------ANAC58                  --------->YAB1 --------->ARR11(3) -----ZmHOX2a(2)  <---------ANAC58             <---------ATHB12    <---------ARR11(3)           <----   gatcacatcacatcacacttgcttcttgtttttctttcatttgattcaaatgaataaaaacttcattgagatcgtgagattggttgatatggctcatgct  4222700                 <----------DOF2             --------->ZAT18             <---------ZAT14             <---------ZAT18                                                             <-----------GT1         --------->DAG2                                                                <-----------HVH21        ---------->DOF2                                                             <----------DOF2    ----------->GT1                      ------->TEIL      <---------DEAR3(2)--------->ICU4    <---------ZAT6                     <---------ZAT14     <------MYB83      <---------YAB1 ------DOF2  --------->ZAT14           --------->ZAT14     <------MYB46(1)<---------ANAC46    <------   ttaatagagttaaagtgaactttgttgacaaataatctctctgtaccggtttagtatcagtcggttttctctggttgtgttgattactttgtcactcttt  4222800                   <------MYB46(1)                   <------MYB83     <---------------AGL15                  --------->MYB59   --------------->AGL15              --------->MYB52(2)   <---------ANAC58                            <<<<<<<<<CBP60g      -              <---------MYB46(3)   <---------ANAC58                    --------->HSFB2a(1)         <-            <---------MYB52(1)     <---------ANAC55(1)                 <---------HSFB2a(1)  ---------           <-------MYC3            <---------ANAC46             <---------ARR14(2)      <-----------GT1 ----DOF2  ------->MYC3 <---------YAB1                     ---------->DOF2     <<<<<<<<<SARD1    <---   tgttgaataaacacgtttgtttggttattgttcaattacttgtagtagataataaacagattaaagaattcggaagttccaaatttcattttactcatga  4222900                                                                   --------->ANAC58                                                       ----------------->AGL1        --------->ANAC58                        <-------MYC4       --------->ANAC58  <---------ATHB12        --------->ANAC58                        ------->MYC3     ---------->DOF2    ------>MYB46(1)    ------->TEIL                                <-------MYC3    <---------MYB52(1)  ------>MYB83 ----------------------->ANAC81      ------------>CBF  ------------>CBF  ------------>CBF -----ZmHOX2a(1)                ------->GAMYB   ------->MYC2   <-------GAMYB     ------------>CBF >YAB1  ----------->GT1      <-----------GT1    <-------MYC2 --------->MYB59   <-----------GT1 ------TOE2(3)  --------->YAB1 --------->MYB46(3)     <-----------------AGL1 <---------ATHB12       <   aggatgaaccaagtaaaatcagaaactaagttaaccacatacaatttgcacatgtgaaccaattcggttaagcaaaccaataaaccaatcttcttcaaca  4223000            ------->TEIL                                                                 ------>NtERF2      --------->ARR14(2)                                              <---------DEAR3(1)--------->DEAR3(1)      <---------ARR14(2)                                    --------->ARR11(3)          --------->MYB46(3)      --------->GLK1(2)                                     <---------ARR11(3)   --------->ANAC58   ------------>CBF                           --------->AHL20(2)  <---------ZAT6 --------->ANAC46<---  ----------------->AG      *TSS         --------->AHL20(2) --------->GLK1(2)    --------->ANAC58<--- -----------GT1     <----------DOF2  <---------ZAT6        --------->RVE1(1)----------->HVH21    <---   aattacccaatctgtatgtaagcttttccacttcttctagtcttaaaataaaacaaacaaaaaatctagtgttcggctctaacacgctcgacgaccatgg  4223100   ----------->GT1       ------>MYB46(1)--------->LBD16   <---------ANAC46      ------>MYB83  <---------TOE2(1)                             <---------ZAT18 ------ANAC58          --------->MYB46(3)                                     ---------->ID1 ------ANAC58         <---------At4g35610              <---------AHL20(2)<----------DOF2 ------RAP2.6(2)    --------->REM1(1)  <---------TOE1(1)          <-----------GT1    --------->ZAT14   cggtctcgtttaatacaacgcttcaccagccttctctgagtccgaggtaatcttcaatttatctaaatttacatacttttgtctctgttcacacatattc  4223200             <----------DOF2       <---------REM1(1)            <---------ANAC58     <---------At4g35610            <---------ANAC58     --------->At4g35610                                         ------>ZmHOX2a(1)         <---------WOX13(1)      <---------ZAT2                                           ---------->ID1       --------->ATHB12          --------->ZAT2                                        <----------DOF2      <---------YAB1     <---------DAG2                                                <---------DAG2    <---------At4g35610  ------>ZmHOX2a(1)                   ---------->DOF2     <---------MYB46(3)    --------->At4g35610  <----------DOF2              <---------LBD16           --------------->AtSPL8   ------->TEIL       ---------->ID1            <----------DOF2   --------->TOE2(3)---------->ID1   acttgcatctgattgctttgttatgtcctttttgcagctgtagcatcaagctttattctgggttaaagcctcaatctgcaagtttgttccttttcctctt  4223300                                                                       <-----------RAV1(1)                                                   <---------At4g35610<---------YAB1                     <---------AHL20(2)          --------->ZAT18 <---------ZAT6            <-------TEIL                    --------->ALFIN1   <------MYB83  --------->ETT(1)<-------       ---------->DOF2            <---------DEAR3(1)           <------MYB46(1)               <-------   aatatgtccgaaagttcatgtttttaatcgaattggtctgcgagatgtgagggaactgatttagttggtgttattgttgtcggaatttgttcaggctttt  4223400                                                                                            ---------               --------->GLK1(2)                                                            -------->HAHB4              <---------GLK1(2)                                                            --------->ICU4      <------MYB83                                                                         <---------ATHB12      <------MYB46(1)                                                                      <---------YAB1    --------->ALFIN1                                                                <---------At4g35610 --DAG2    --------->YAB1               ----------->GT1                         <----------DOF2 ---DOF2<---------GLK1(1)   --------->GLK1(1)                       ----------->GT1 --------->At4g35610   tggcaagtgggtatcagaatttgaacaaggagttctatggaagagtttataagagtctgcaatctgggtaatgtgaattcttcttttgctgaaatgattc  4223500  Previous    Next  AGI:  At1g12400.1    Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G62886.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16963.1); contains InterPro domain Nucleotide excision repair, TFIIH, subunit TTDA; (InterPro:IPR009400) Range:  from: 4221861    to: 4222835    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g12410.1    Description:  CLPR2 (Clp protease proteolytic subunit 2); endopeptidase Clp. Identical to ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplast precursor (CLPR2) [Arabidopsis Thaliana] (GB:Q9XJ36;GB:Q93ZD4); similar to hypothetical protein [Vitis vinifera] (GB:CAN62361.1); contains InterPro domain Peptidase S14, ClpP; (InterPro:IPR001907) Range:  from: 4223028    to: 4225122    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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