Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                 ----                                                                                                -----                                                                                               <-----                               --------->YAB1                                                  <-----                              <---------ATHB12                                                 <-----              <---------ARR11(3)                                                               <-----              <---------AHL20(1)   --------->GLK1(2)                         <---------ANAC58  ------              --------->AHL20(1)   <---------ARR14(2) --------->DAG2         <---------ANAC58  <-----              --------->ARR11(3)   --------->ARR14(2)---------->DOF2         <---------ANAC46 <------ --------MYB52(1)   <---------GLK1(2)     --------->HSFB2a(1)       --------------->AtSPL8   <-------   cgtttctcaggcccaatatatagaatttgctaatcaaaatccgagccttctctgaaaaagcccatttttgttcgttcttccttgtttcttcgattttccg  4197000   <---------GLK1(2) ---------WOX13(1) ------->HVH21 ---->LBD16 ----ANAC58                                                     <---------HSFB2a(2) ----ANAC55(1)                                              <---------At4g35610 ----ANAC55(2)                                              --------->At4g35610 ----ANAC58                                                 --------->ZAT2   --------->At4g35610 --->ANAC55(2)                --------->MYB52(1)  --------->YAB1--------->HSFB2a(2) ----ANAC46             ----------->GT1      <-------TEIL   <---------ZAT2   <---------At4g35610 ---LBD16            <------ZmHOX2a(1)      --------->CCA1(2)  <---------LBD16  <---------At4g35610<- --At5g28300     ---------->DOF2   <---------ANAC46  <---------ICU4         --------->ALFIN1      <--   tgactgattctgttttgcgaaaaggattgaaacaacgatgtgtaagatacattgataatttcagctctggaaatagaggtgctgcttctactgagtaagt  4197100                                                                                   ----------->HVH21                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                                               <---------HSFB2a(2)          <---------HSFB2a(2)                                      --------->TOE2(3)          --------->HSFB2a(2)                              ----------->GT1     --------->HSFB2a(2) --------YAB1                                       <------------CBF        <-----------GT1     ----- ---------TBP         ----------->RAV1(1)     ---------->DOF2      --------->TOE1(3)           ------   ttttatagttttccagactaaaacccacataagtttgatatgaactgagaaagagattgtaatgaaaaaccttgaatgtttccagatgacccatgaactg  4197200       --------->ARR11(3)       <---------ARR11(3)                                                              >>>>>>>GRF7      --------->RVE1(1)        <---------ANAC58                           <---------MYB46(3)    --------->AHL20(2)   <---------GLK1(2)                    --------->MYB52(2)    <-----------HVH21 ------>GT1<----------DOF2<------------CBF   <-----------TBP<---------MYB52(1)  <-------TEIL ----->GT1 ------>ZmHOX2a(1)   <---------ANAC58       <-------TEIL    <-----------RAV1(1)           <   gaaaaaaaaaatccttttcgcaaaacagaattggcttctcaaaacacatttataggttcatagttagttcttatgttggatgttcatgtcaggtctgaga  4197300                   <---------MYB46(3)              <-----------RAV1(2)   <---------At4g35610        ---------->DOF2             --------->At4g35610      ------->TEIL      <---------ANAC46       ------>ZmHOX2a(1) <----------DOF2          --------->ICU4  <---------MYB52(1)               <- -----------GT1   <--------P <---------YAB1 --------->RAP2.6(3)  <----------DOF2--------->REM1(2)<---   atttacctccttaagcacaggttgttcctttataaatgagctccatttcggcataatgaagtgaaccctttagttttgtttgtgtagactctaatgagag  4197400                              --------->HSFB2a(1)                              --------->HSFC1(2)                              <---------HSFB2a(1)                              <---------HSFC1(2)                             --------->GLK1(2)                             <---------ARR14(2)                             --------->ARR14(2)                            <---------GLK1(2)                          --------->At4g35610                         --------->ANAC46                              <---------At4g35610                         --------->ANAC58                           <------ZmHOX2a(1)                         --------->ANAC58                        --------->HSFC1(1)                       --------->MYB52(1)                        <---------HSFB2a(2)                   --------->ANAC58                      --------->ARR11(3)               --------->ANAC58                          <---------ARR11(3)       <----------DOF2 ----------HVH21   --------->ANAC58            --------->ZAT2    --------->HSFB2a(2) ---ZmHOX2a(1) --------->ANAC58            <-----------GT1       <---------HSFC1(1)                 <   gagtcactgagactgataagctagcaaacggaatcttccatgtataaacagcttgggaagacattttctaggaagctaacttctcttttctgaatttgaa  4197500                             --------->GLK1(1)                             <------ZmHOX2a(2)                            --------->ARR14(3)                            <-----------ARR10                            <---------ARR14(3)                            --------->ARR11(3)                            <---------ARR14(2)                            <---------AGP1                            --------->ARR14(2)                            <---------ARR11(3)                           <---------ARR14(1)                        <---------At4g35610                                                      <---                       --------->MYB52(1)                                                      ------                      ---------->CDC5                                                       ---------                    <---------ANAC58      --------->AHL20(2)        --------->HSFB2a(2)   <---------LBD16           <---------ZAT2  <---------CCA1(2)                        <---------HSFB2a(2) <-----------GT1           <---------At4g35610------>ZmHOX2a(2)  -------->P     <---------ANAC46   <---------MYB46(3) ----------DOF2     <---------ANAC58  <---------YAB1   --------->SPL7   <---------KAN4(2)<---------At5g28300   ttctttcatttgcagcttgtttgcttagcggatctcgagtttgattatatcaacccttacgactctgcgtcgagaataaactcagtggttttaccggagt  4197600                                  --------->MYB52(1)                          <-----------GT1       <-------TEIL                      --------->ARR14(2)--------->ZAT14                      <---------ARR14(2)<---------ZAT14                   --------->ANAC55(2) <------ZmHOX2a(1) ----TEIL          <---------ANAC58    <<<<<<<<<<<<<<<<<LFY --->GLK1(1)       <---------ANAC58   --------->ANAC46                    --------->ZAT6 >LBD16    --------->GLK1(1)     ------>ZmHOX2a(1)                     <---------CCA1(2)   tcattgttcaaggagttctatgcgtattctacctcctaacaggacactggttcatgacactcttatgtctcccctatctctactacaatttccatctgta  4197700                                               <---------ARR11(3)                                     <---------AtMYB61   --------->ARR14(2)                                   <---------ANAC46<----------DOF2                     ----------->RAV1(1)                            --------->YAB1     --------->ARR11(3)            --------->HSFB2a(2)                <----------DOF2 <-----------RAV1(1)------>ZmHOX2a(1)     <---------MYB52(1)         --------->TOE2(3) <---------ATHB12   --------->GLK1(1)  <---------MYB52(1)   --------->REM1(1)    <---------MYB52(2)   --------->WOX13(1)   <---------GLK1(1) <-------GAMYB<---------HSFB2a(2)   agtccaactaatctcaatcttttgctccaatcaaatgttgtggtattgatatcctttcggtttctccgttgttcagttactcgaagcgacaacacttagt  4197800            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          --------->ARR11(3)          <---------ARR11(3)          <---------ARR14(2)          --------->ARR14(2)          --------->ARR14(3)                                          --------->TOE1(3)          <---------ARR14(3)                           <---------ANAC58          --------->AGP1                 --------->MYB52(1)<---------ANAC58                         -         --------->GLK1(1)              --------->ARR14(2) <---------ANAC58                   -------        ----------->ARR10               <---------ARR14(2) <---------ANAC46    <----------DOF2<------  ----------->HVH21                  >>>>>>>>>TBF1     <---------ANAC58------>ZmHOX2a(1)--------->ARR11(3) <-----------HVH21     <---------------AGL15   <---------MYB46(3)     --------->TOE2(3) <---------ARR11(3)   agatgtcaccgagatcttcaatttgctaaactgggagaagaagaaacggctgttcaagcttgcttacattgtccttaacctctttctcactatcttctgg  4197900  Previous    Next  AGI:  At1g12340.1    Description:  similar to cornichon family protein [Arabidopsis thaliana] (TAIR:AT1G12390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16964.1); contains InterPro domain Cornichon; (InterPro:IPR003377) Range:  from: 4197394    to: 4198308    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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