Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                           ------->GAMYB                                                                                          --------->MYB46(3)                                                                                          <---------ATHB12                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                            <----------DOF2              ------>MYB83                              <---------ARR11(3)           <---------ANAC58              -------->P                              --------->GLK1(2)            <---------ANAC58       <---------GLK1(1)                             <---------GLK1(2) --------->TOE1(3)                  <----------DOF2                        --------->AtLEC2      ----------->RAV1(2)                <---------ANAC58 ---ANAC58           <---------DEAR3(1)  --------------->AtSPL8      --------->ANAC46    ------>MYB46(1) ---ANAC58       --------->DAG2         --------->ICU4--------->MYB52(1)         <---------ANAC58   acatgaatacatagaacataaggtcgatgcagaatctttgaaatgagtacctgaactaatggctttggaacacgagagtcatggctttcccaaccaagaa  4181900                       <---------RAP2.6(2)                    <---------AtMYB61                   --------->SPL7                  <---------MYB52(1)                                     --------->ANAC46                 <---------SPL7                                  --------->ANAC46                ------->GAMYB                          --------->ZAT14   --------->ANAC58              -------->P                               <---------ZAT18   --------->ANAC58              ------>MYB83<---------ANAC58             <---------ZAT14 ---------->DOF2              ------>MYB46(1)                  ------>ZmHOX2a(2) --------->ANAC55(1)             ------>MYB46(1)                  <---------GLK1(1)  --------->ANAC58             --------->MYB52(1)              <---------ARR11(3)  --------->ANAC55(2) <---------ANAC55(2)          --------->ANAC58<---------ANAC46   --------->ARR11(3)  <---------ANAC55(2) --------->ANAC55(2)          --------->ANAC58<---------ANAC58<---------WOX13(1)     --------->ANAC58----------->RAV1(1) ----ARR11(3)------>MYB83<------NtERF2  --------->ATHB12  --------->ANAC46    --------->AtLEC2   ctgaagcatgaaacccaaccgtatggtggcttaagaacagcaagattgatctccctctgcacaaaacacgcattcaagcaatgcaacatgtaatccaaaa  4182000                                         ---------->DOF2                                    --------->MYB52(1)                                 --------->ANAC58                                 --------->ANAC58                                 <---------ANAC55(2)                    ----------------------->TaNAC69(2)                  <---------ZAT6 --------->ANAC55(2)           --------->ICU4    <---------ANAC55(2)                          <----------DOF2          <-           <---------ATHB12  --------->ANAC55(2)               ---------->DOF2             <---------ZAT14   acatttcagactaatgagtagtcttcagattaagtaagtaactgaaagtctagcgactagccttacaaagcagaggctttattagttttggactccagta  4182100                                                          --------->GLK1(2)                                                          <-----------ARR10                                                    ----------->GT1                                                   ----------->GT1                                               <------NtERF2                                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                         <XXXXXXXXXXXXXXXXXXXXXMIR472                                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               ------->TEIL   <xxxxxxxxxxxxxxxxsmallRNA(s)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->ARR11(3)                          <------MYB46(1)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <---------ANAC55(1) <xxxxxxxxxxxxxxxxsmallRNA(i)                          <------MYB83   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                          <---------ANAC46   <---------DEAR3(1)      <---------ARR14(2)                         --------->MYB111(1)<---------LBD16         <---------CCA1(2)                         --------->MYB59<xxxxxxxxxxxxxxxxxsmallRNA(le3)              <---------ALFIN1                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->ARR11(3)   --------->At4g35610                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------ARR11(3)  <-----------ARR10                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<------ZmHOX2a(1)        ------->TEIL    <-----------HVH21<------ZmHOX2a(1) <xxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------ANAC58       --- ----------GT1    <-----------RAV1(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------ANAC58   -------   gtaacccatcagagatggactcaggattaggtgtatgtatggtatgggcggagtaggaaaaatcttactcaaatcttgcgcatctcaacacttgcaaaca  4182200                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                         <-------TEIL                                                                                     <xxxxxxxxxxxxxxx                                                                              --------->AtMYB61<-----                                                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   <---------ANAC58  <-------TEIL*TSS                                                           ----------->ARR10<xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       ----------->GT1<xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                      --------->DAG2 <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                 --------->HSFB2a(2) <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                             ------>ZmHOX2a(2)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                   --------->ATHB12 ---------->DOF2<---------ANAC58  <xxxxxxxxxxxxxxx    --------->TOE1(3)       --------->ANAC46<---------At4g35610 <xxxxxxxxxxxxxxxxsmallRNA(s) <xxxxxxx    --------->TOE2(3)      --------->LBD16 --------->ARR14(2)--------->ARR11(3)      <xxxxxxxxxxxxxxx ------>AtMYB61   <---------ARR11(3)       <---------ARR14(2)<---------ARR11(3)      <xxxxxxxxxxxxxxx -->MYB46(3)   ----------->RAV1(1)<-------TEIL   <---------HSFB2a(2)<---------MYB59 <xxxxxxxxxxxxxxxx   ccaaaaccttacaaatccaacatctattccacaaaattcattgttgatctgctagaaaggtgagattttgcctacttcgaccatacatacatacagaggc  4182300       <---------ARR14(2)       --------->ARR14(2)       <---------ARR11(1)       --------->GLK1(2)    --------->LBD16 -----ANAC46                                      <------------CBF -----ANAC58                                     <---------ICU4 ---->ANAC55(2)                                  --------->ATHB12 -----ANAC58  <----------DOF2                    --------->YAB1 xxxxxxxxxsmallRNA(fl3)                          -------->ATHB1                                   --- ------------------TaNAC69(2)                   <---------YAB1                                    --- xxxxxxxxxsmallRNA(le3)                 ---------->ID1                                            <-- xxxxxxxxxsmallRNA(s)               <----------DOF2                                               --- xxxxxxxxxsmallRNA(se3) --------->ARR14(2)      <---------ATHB12                                  --- xxxxxxxxxsmallRNA(si3) <---------ARR14(2)      --------->ICU4            --------->YAB1          --- xxxxxxxxxsmallRNA(fl3) --------->GLK1(2)<---------ANAC46                <---------ATHB12   <--------   gtaatcccgaatccatctttgatgagaatatgactcccctttggcgcataatcattgacaaaacttgatgctcaaatgatactgagacagagaaacaaac  4182400       --------->ZAT18                                                                         ------       <---------ZAT18                                                                        <------ZmHOX2a(2)       --------->ZAT14                                                     --------->TOE2(3) --------       <---------ZAT14                                                    --------->YAB1     -------- <-----------HVH21                                                        <---------ICU4     <------- ------>ANAC55(1)                                                         --------->ATHB12   -------- ------>ANAC55(2)                                   --------->ANAC58     <---------ATHB12    <------- -------ANAC55(2)                                   --------->ANAC58 --------->AHL20(2)      -------- ------>ANAC58                               --------->ANAC46      ----------->GT1           <------- ------>ANAC58               <-------TEIL  <---------ALFIN1        --------->ANAC55(2)       <------- ------>ANAC46       ---------->DOF2    --------->MYB46(3)         <---------ANAC55(2)      <-------- -MYB52(2)       <---------ZAT6       --------->MYB52(1)          --------->MYB59           <--------   acgcatcactgcactaatagagataaagagattcacagactaacaacacagcataagctaatttgagttaagtaaatcattagaatagagaaccagatct  4182500   --------->TOE2(3)  --------->YAB1  <---------ICU4  -------->ATHB1  --------->ATHB12  <--------HAHB4 <---------ATHB12 >ZmHOX2a(2) ->ARR14(3) ->ARR14(2) --ARR14(2) ->AGP1 --ARR14(3)                                                                              <------ZmHOX2a(2) ->ARR11(3)                                                                     --------->ANAC46 --ARR11(3)                     <---------TOE2(3)                               --------->ANAC58 --AGP1<----------ID1          ---------->DOF2                               ------->GAMYB----------- -CCA1(2)                 <---------YAB1            --------->ANAC46      ----------->RAV1(1)-------- -ARR14(1)        <-----------GT1          <----------DOF2    <---------ATHB12  --------->ANAC58   --   tgaatcattagaacaaaaaataacaaatttgattaaagtttcagtcttttcttcactaaaccctatcaagtttcgacaacacacacaatcgatccaaaag  4182600                                                                        --------->HSFB2a(2)                                                                        <---------HSFB2a(2)      --------->TOE1(3)                                         ------->TEIL      --------->TOE2(3)                                        <---------ARR14(2)                ----      <----------DOF2                                        ----------->ARR10                   ---- --------->DOF5.7(2)                                   --------->MYB52(1)                      <----- ------>AGL3                             ----------->GT1 --------->ANAC58                     <------ -->DOF2    --------->YAB1        ----------------->AGL1 --------->ANAC58      --------->GLK1(2)<---- --------->GT1                  ------------------------>ANAC81--------->ARR14(2)             -------   aaggttaactttaatcaaaaattaagctattgaatagccaaatgagaaaaaaaaaaaaaacggaagaacctctgcgagaagaatctatgtaatggtccgt  4182700                                            ------>NtERF2                                            <---------RAP2.6(3)                                           >>>>>>>>>AtERF-4                                           >>>>>>>>>AtERF-3                                           --------->RAP2.3(3)                                           --------->RAP2.3(2)                                           --------->ATERF1(2)                                           <---------ATERF1(2)                                           --------->DEAR3(1)                                           <---------bZIP60(1)                                           --------->RAP2.6(2)                                           --------->RRTF1(3)                                          --------->RAP2.3(1)                                          --------->RRTF1(1)                                          --------->ATERF1(1)                                          --------->ORA47(2)                                          <------NtERF2                                          --------->ERF1                                         --------->ABI4(2)                                         ------>NtERF2                                         <---------ATERF1(1)                                        --------->ARR14(2)                                        <---------ARR14(2)                                        --------->ALFIN1                                        <---------DEAR3(1)                                       --------->ATERF1(1)           --------->ZAT2             <---------ATERF1(1)           <---------At4g35610       <---------DEAR3(1)     <---------MYB46(3)             <-------MYC3   <---------MYB52(1)        ------>ZmHOX2a(2) ----->WRKY38(1)           <---------ARR11(3) <---------ALFIN1               ----------->HVH21 ----->WRKY12   <---------ZAT2    <---------LBD16                          <---------ANAC58 --GAMYB   <---------ZAT2  --------->ARR11(3)<------NtERF2     ---------->DOF2<-----------HVH21 ---MYB46(3)    <---------At4g35610 ------->MYC3<---------CCA1(2)     --------->DAG2 -----MYB52(1)  --------->ZAT2   <---------ALFIN1        --------->PCF2    <---------ANAC58 -->MYB52(2)    --------->At4g35610--------->ANAC46 <----------DOF2  ---------->DOF2   tgtccgtttgtcgagctcagctcagacatgatcttccacgcggtgccgccatctctttgggcccataaagaaaaagggcctgtcagagaacccatttcaa  4182800  Previous    Next  AGI:  At1g12294.1    Description:  MIR472a; miRNA Range:  from: 4182130    to: 4182297    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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