Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->KAN4(2)                                       --------->KAN4(1)                                       <---------HSFB2a(1)            <---------YAB1            <------ZmHOX2a(2)  <---------ICU4                  --------->ALFIN1                  --------->ALFIN1               --   taactcattacattatgtttttgttattttcaataggtggatcattcgatagtagaagcattcggacaaggtggaagaacatgtataacatcaagagtct  4157300                                                                        <---------ANAC46                                                                       <------NtERF2                                                                      ------>NtERF2                                                                     <---------ANAC46                                                                     --------->DEAR3(1)                                                                     <---------DEAR3(1)                                                                   <---------RAP2.3(1)                                                                  <---------RAP2.6(2)                                                                 <---------At5g28300                                                               <---------MYB52(1)                             --------->ARR11(3)                --------->ARR14(2)                             <---------ARR11(3)                <---------ARR14(2)                           --------->ANAC58              ----------->HVH21                    <---------At4g35610     ---------->DOF2   <-------GAMYB       ------->GAMYB--------->ZAT2          <---------ICU4    <-----------HVH21     --------->At4g35610   --------->ANAC58 --------->YAB1   <---------DEAR3(2)   --------->MYB46(3) --------->RAP2.3(3)   <--------ATHB1------------>AtMYB77   <---------MYB55(2)--------->ATERF1(1)   <---------ATHB12  <---------MYB46(3) ------->MYB46(3)   --------->At4g35610    <---------ATHB51 <---------DEAR3(1)   <---------MYB52(1) <   atccaacaactgcaatctatggagcagccaagctcttcttgttcaataatgctcttgatgcgacggttacggcgtcgtttacagtttggcaaatgaacag  4157400                                  --------->ZAT14                                  <---------ZAT14                               <---------ANAC58                         --------->ZAT2                                                            --                         <---------At4g35610                                                       <-                         <---------ZAT2                <---------YAB1                              <-                         --------->At4g35610  ------->TEIL                                         <-                        --------->GLK1(2)   --------->LBD16<-----------GT1                         --                  ----------->TGA1<---------ZAT18   <---------YAB1                                 --            ------>ZmHOX2a(1)  <---------ANAC58 <---------MYB59                                   ---           --------->TOE2(3)<-----------HVH21 --------->SPL7                                      <--          <---------ICU4------->TEIL       --------->ANAC55(2)                                    <-- ----------DOF2   ----------->HVH21       --------------->AtSPL3                                -----   tgcttttattcatccttactctgacgaagctgtccgtgctctctcccgtacctgattatttttacttccttctcattttttatacatagatttatctgta  4157500  <---------AHL20(2) <---------YAB1 ------->YAB1                                                       ------------>CBF -------ATHB1                                                      --------->YAB1 --------ICU4                                                      <-----------GT1 -------HAHB4                                                     <---------YAB1 ------->ATHB51                                                --------->ICU4                       < ------>HAHB4                                    --------->ZAT18<---------ICU4             --------->AHL20(1) ------>ICU4        --------->AHL20(2)         --------->DAG2  <---------YAB1              <---------AHL20(1) -------ATHB51      <---------AHL20(2)       ---------->DOF2 <---------ICU4                <---------AHL20(2) -------YAB1 <-----------GT1          ----------->GT1       <---------YAB1 ------------>CBF--------->AHL20(2) ---->YAB1  <-----------GT1     <---------AHL20(2)        --------->YAB1  <-----------GT1 --------->AHL20(2)   ataattaatggttttttccgattttatttgatatttgatttagaaaaaaaaggcactgaaacatcattatcacaatttacaattttggagaaataaattt  4157600                                     --------->HSFB2a(1)                                     --------->HSFC1(2)                                     <---------HSFB2a(1)                                     <---------HSFC1(2)                           ---------->DOF2                          <---------AHL20(2)                     --------->AHL20(1)                     <---------ARR11(3)            <----------CDC5                     --------->ARR11(3)           <---------ZAT14                     <---------AHL20(2)           --------->ZAT14                     <---------AHL20(1)           --------->ZAT18               --------->ANAC55(2) <---------GLK1(2)*TSS                                ---------->CDC5 ---------AHL20(2)   --------->AHL20(2) <---------LBD16                     <----------DOF2 ---------   gtttaatagtttttttcatgtaatatattaaaagtcagaaccttcggattagcgcagagggtttgagaaacagagcttcttttttttggctcatcgtcaa  4157700                   <---------MYB52(2)                                                      --------->LBD16                   --------->ANAC58                                                       --------->ANAC55(2)     --------->ALFIN1                                                                     <---------ANAC46     <-----------RAV1(1)   ----------->GT1                                       <----------DOF2 ---------->DOF2   --------->ANAC58<---------ZAT6                          <---------ZAT14<---------ANAC58 >TOE2(3) <------NtERF2--------->MYB46(3)---------->ID1                    --------->ZAT14<---------ANAC58   aacaaaagtgttggcgatggaacgaactactgtaatactgttcgtcttcttcttgctctctgtagcaatgtgttctcttcactctttttcttccgtagca  4157800                                                                                           <---------O2                                                                                           --------->O2                                                                                           >>>>>>>>>>HY5                                                                                           <---------ANAC46                                                                                           <---------ANAC55(2)                                                                                           <---------TGA1a                                                                                           --------->TGA1a                                                                                           <---------bZIP60(2)                                                                                           <---------TGA2(1)                                                                                           --------->TGA2(1)                                                                                           --------->bZIP60(1)                                                                                          <----------                          <-----------GT1                            --------->YAB1       -----------                    ----------->GT1                                 --------->ICU4      ----------->HVH21                    <---------ANAC55(2)                        --------->YAB1           ----------->TGA1                    --------->ANAC58                        --------->GLK1(1)       --------->ZAT18                    --------->ANAC55(2)                     <---------GLK1(1)    --------->ALFIN1                    --------->ANAC58                       --------->ARR11(3)  <---------ANAC46               <---------------AtSPL8                     <------ZmHOX2a(1)    <---------ANAC58              ---------->DOF2                        ------>ZmHOX2a(1)    ------>ZmHOX2a(1)<---------bZIP60(1)     --------->YAB1<-------TEIL               <---------CCA1(2)----------->GT1 <---------ANAC58     <   atttcattcagaactcaaaagtacgtaaatacctctctcgttcatcgcttatctcctataggatatcgtaattatcctctaccgtgggcagtgacgtcaa  4157900                                                         <-------TEIL                                                      <------MYB83                                                      <---------DEAR3(2)                                                     <---------MYB46(3)                                     <---------LBD16--------->ALFIN1        <---------TOE1(3)       <                            <------NtERF2         <---------O2              <---------TOE2(3) <------                           ----------->GT1       <---------AtMYB61          --------->MYB59   -------    <---------GLK1(1)      --------->LBD16       --------->ALFIN1     ----------->ARR10       <------    --------->GLK1(1)     --------->LBD16--------->ARR14(2)        <---------ANAC46         --------- -STF1       ------>ZmHOX2a(1)       ----------------->AGL1       <------NtERF2           <---------LBD16 >STF1      --------------------->WRI1 --------->LBD16<------MYB46(1)<------NtERF2   <---------HSFB2a(2) ---------TOE2(3)        <---------LBD16 <---------ARR14(2)     <---------DEAR3(1)   --------->HSFB2a(2)   ttgacgaaatccctcctaatgctgttcgccggaaaatagaccggaattggagaggtgggttcagtctcggcgtagatttaggtttatctcgaaccggaat  4158000                                                               <---------ANAC46                                                               <---------ANAC58                                                               <---------ANAC58                    <---------MYB52(1)        --------->HSFB2a(1)                   --------->At5g28300        --------->HSFC1(2) ----------DOF2   ----------->GT1 --------->At5g28300       <---------MYB52(1) ---ARR14(2)   --------->REM1(1)--------->ANAC58   <---------HSFB2a(2)                             <- -->ARR14(2)   <---------ALFIN1 --------->ANAC58   --------->HSFB2a(2)                             <- ---GLK1(2)   <---------ZAT14----------->HVH21<---------HSFC1(2)                                   <- >LBD16---------->DOF2 <-----------GT1        <---------HSFB2a(1)                                 ---   cgctattagtaaaggctacaccgttaaacctctcacggtaactttcgaaatttctcgacctcgttgcgttttcaaattcagtaatgaagttgatatgaat  4158100                                                                                                 <---            <------MYB83                                                                        <----            <------MYB46(1)                                                                     <----           --------->MYB59                                                                --------->ATHB12           <---------TOE2(3)                                                              --------->ATHB51      <---------YAB1                                                                     <---------AHL20(2)    <-----------GT1                                                                      <---------YAB1 --------ANAC46                                                                        --------->YAB1 --------ANAC58                                      --------->HSFB2a(2)       <---------At4g35610 --------ANAC58              ----------->GT1         <---------HSFB2a(2)       --------->At4g35610  < ------>MYB59        <<<<<<<<<<GATA-1             <----------DOF2   >>>>>>>>>TBF1   ------->TEIL<----   tgggtattactattaggttttgaaatcgagagggcaaaaactcgagaccaggcttttagaaattgctgaagaagaagaggctgatgaatttataattggg  4158200  Previous    Next  AGI:  At1g12240.1    Description:  ATBETAFRUCT4/VAC-INV (VACUOLAR INVERTASE); beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds. similar to beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar [Arabidopsis thaliana] (TAIR:AT1G62660.1); similar to acid invertase [Brassica oleracea] (GB:AAG36943.1); similar to acid invertase [Brassica oleracea] (GB:AAG36942.1); similar to soluble acid invertase [Pyrus pyrifolia var. culta] (GB:BAF35859.1); contains InterPro domain Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148); contains InterPro domain Glycoside hydrolase, family 32; (InterPro:IPR001362); contains InterPro domain Glycosyl Range:  from: 4153650    to: 4157642    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g12244.1    Description:  DNA binding / hydrolase, acting on ester bonds / nuclease/ nucleic acid binding / recombinase. similar to unnamed protein product [Vitis vinifera] (GB:CAO70617.1); contains InterPro domain Resolvase, RNase H-like fold; (InterPro:IPR006641); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Resolvase, holliday junction-type, YqgF-like; (InterPro:IPR005227) Range:  from: 4157652    to: 4159044    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version