Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->LBD16                                                      <---------MYB46(3)                                                     <---------ANAC46                                         ---------->DOF2                                       <---------HSFB2a(2)                                       <---------------AGL15                                       --------------->AGL15                                      <-----------------AGL2                           <<<<<<<<<<<<<<<<<LFY      <---------ANAC58                        --------->HSFC1(2)           <---------ANAC58      <---------AHL20(2)                        <---------HSFB2a(1)        ------>ZmHOX2a(2)    --------->AHL20(2)                        --------->HSFB2a(1)  --------->ALFIN1           <---------AHL20(1)            ---------->DOF2>>>>>>>>>>>>>>>>>LFY <---------PCF2          --------->AHL20(1)       ----------->GT1  <---------HSFC1(2)--------->DAG2      --------->ARR11(3) ---------->GT1      ---------->DOF2  <-----------------AGL3  <---------ARR11(3) ----->ANAC46  --------->At4g35610 <---------GLK1(2)<---------LBD16<-----------HVH21              ---   cgtagaaaaatgtgaaaagctgagaaagcttccattggattctaaaagtgggatcgcgggtgaagaacttgtcatatattatggagagagagaatggata  4147600                                                           <-------GAMYB                                                           <------NtERF2                                                           --------->ATERF1(1)                                                          <---------MYB46(3)                                                         <---------ANAC46                                                         <---------DEAR3(1)                                                         <---------ANAC58                                                         <---------RAP2.6(2)                                                         <---------DEAR4(1)                                                         <---------DREB2C(2)                                                         <---------ANAC58                                                        <---------ABI4(1)                                                        <------NtERF2                                                    <---------ZAT2                                                    --------->ZAT2                                                    <---------O2                                                    --------->O2                    --------->ANAC58              <-----------RAV1(2)                    ------>MYB83           --------->TOE2(3)                    --------->AtLEC2       --------->TOE1(3)--------->ALFIN1                    --------->ANAC46  <---------ANAC58  --------->ATERF1(1)                        <-                    ------>MYB46(1)   <---------ANAC58----------->HVH21                     ---------  ----------->GT1   --------->ANAC58<-----------ARR10 --------->ALFIN1--------->YAB1 <----------DOF2 ------->DOF2  <------ZmHOX2a(1)   <---------MYB52(1) <---------DEAR3(1)      ------->TEIL  <--------   gaaagggttgaatgggaggaccaagcaactcaactccgtttcttaccttcatccaggtggcggtggagagaaacataatgaacttcactttcttctacaa  4147700                                 ----------->GT1                                                  <--                               <---------ANAC46                                                   ---                              <---------MYB52(1)                                                 ----                            <---------DREB2C(2)                            <---------YAB1        <---    ---------->ID1          <---------DEAR3(1)                       <------------MYB.PH3(1)  <------  <-----------RAV1(1)      <---------LBD16        ---------->ID1   <---------ARR14(2)       --------- ---------DOF2      <---------ARR11(3)        <---------ANAC58     --------->ARR14(2)     <--------P >HSFB2a(2)         --------->ARR11(3)        <---------ANAC58  <---------AtLEC2    <----------DOF2 -HSFB2a(2)     ---------->DOF2--------->ALFIN1   <---------CCA1(2)--------->MYB52(1)   <---------MYB46(3)   acttttgttgtcatggtctaaagacatttgccggtgtgtaaatctcttccttgtctcttcttgtttgcataaccgttctcatcgttcttttggttagtga  4147800      --------------->AtSPL8      <---------------AtSPL3 -------ICU4 ------>ATHB12 ----->ICU4 ------YAB1                                  <---------RAP2.6(2) ---ZAT6           <----------DOF2      --------->MYB52(2) <---------ICU4 >MYB52(2)     <---------CCA1(2)<---------YAB1   <----------DOF2                         --------->YAB1   tcattggatttgtacttatctctttctctaaacgatgagtgtttgtttcggcttcatagaaacattacacagagactcatgagaaaatgaataaaaactt  4147900                                                                                        --------->ATHB12                                  ------->GAMYB                                     --------->ANAC58                                <---------At5g28300                                 --------->ANAC58                               --------->MYB52(1)                                   --------->ANAC46                               <-----------GT1                                      --------->O2                           <---------ICU4                                         <---------ALFIN1                           --------->ATHB51                                     --------->DEAR3(2)                           <--------HAHB4                                      --------->PCF2                           -------->HAHB4                                      <---------TCP20                          --------->AHL20(2)                                   <---------TCP15(1)                          <---------YAB1                                      <---------PCF2                          <---------ATHB51                                    --------->TCP15(1)                   --------->AHL20(1)                                        ----------->HVH21                   <---------AHL20(1)                                        <---------SPL7                   --------->AHL20(2)                                        <------NtERF2                   <---------AHL20(2)                                        --------->ATERF1(1)  ---               <---------YAB1 --------->AHL20(2)                           <---------ANAC58      ----             ----------->GT1  <---------AHL20(2)              --------->AHL20(2)--------->TCP15(2)---             --------->YAB1--------->YAB1                <---------ANAC46  <---------ANAC58      <---         --------->MYB46(3)<--------ATHB1      --------->WRKY12           <---------LBD16<-----------      ------>ZmHOX2a(1)   --------->ICU4       --------->WRKY38(1)      --------->DAG2  --------->MYB52(2)     <---------MYB59    --------->YAB1 <---------CCA1(2)<---------LBD16---------->DOF2<---------MYB52(1)  <---------ARR11(3)  --------->AHL20(2)       ----------->HVH21      ---------->DOF2--------->TOE2(3)   gcaagttcctaaccattgtaataaaataataattaactgtcttatctcgttgacagttttcggataaattagaaaaggcgggacccacgttaattggaag  4148000             ------>ZmHOX2a(2)            <---------At4g35610            <---------GLK1(1)           <---------ARR14(2)           <---------ARR11(3)           --------->ARR14(2)           <---------AGP1    --------->MYB46(3)         *TSS  --------->MYB52(1)     --------->AGP1  --------->AHL20(2) ------>CCA1(2)         <---------At4g35610                                                         < ----->ARR11(3)         --------->At4g35610                                                         - ------>GLK1(1)<---------At4g35610 --------->At4g35610             ------>NtERF2                  --- ------ARR11(3)--------->At4g35610 <---------At4g35610           <---------LBD16                ----- -CBF    ----------->ARR10<------ZmHOX2a(2)       <---------ALFIN1--------->ANAC46    --------->At4g35610   atatcaacggctggatctgcttactcagatcaacttcagcgaaaaaaatgccactctcgttgcaatctccgccttgtgcaactctctctgcttcaatccg  4148100       ------>ZmHOX2a(1)                                                  <----------DOF2 ---------ZAT14                    ------->TEIL                         <---------ZAT2 -------->ZAT14                <---------TOE2(2)                     <---------ANAC58 ------>ZAT14                  <---------TOE1(2)                     <---------ANAC58 ---->LBD16          <----------DOF2     --------->ZAT18     --------->MYB52(1)   agtactctcctcttcgcttacttctttcaatcgcatgtatttgtgcattgtttgttttttatctaatggatgcgagctttgaacttcgcagaagggacga  4148200                       --------->ANAC46                 <---------GLK1(2)                 <---------ARR14(2)                 --------->ARR14(2)               --------->LBD16             <---------LBD16             --------->ATERF1(1)             <------NtERF2             --------->RAP2.3(1)            --------->ABI4(1)            ------>NtERF2            <---------ATERF1(1)           <---------DEAR3(1)           --------->RAP2.3(3)           --------->RAP2.3(2)                                                    <---------ANAC58           <---------ATERF1(2)                                                <---------ANAC58           --------->ATERF1(2)                                                <---------ANAC58           --------->DEAR3(1)                <---------DOF5.7(2)           <---------GLK1(2)          --------->RAP2.3(1)              <---------MYB52(1)              --------->ARR14(2)          --------->DEAR4(2)            <------NtERF2                   --------->TOE1(1)          --------->ATERF1(1)          --------->LBD16                 <---------LBD16          --------->ERF1 <---------MYB52(1)--------->DOF5.7(2)         ------>ZmHOX2a(1)           --         <---------ATERF1(1)          --------->ANAC46                 --------->LBD16  <---------MYB52(1)        --------->ANAC58 <<<<<<<<<MYB98------>NtERF2           ===============HOX2a_HOX2a   ---------        <---------DEAR3(1)      ------>ZmHOX2a(1)--------->ZAT14   --------->ARR14(2)  --------->LBD16        --------->ANAC46<-----------HVH21 <-------GAMYB        <------ZmHOX2a(2)  <---------ANAC58<--        --------->ANAC58<-------GAMYB<---------LBD16     <---------DEAR3(1)<---------ARR14(2)   -----   tggaagacgctcgccgccggattctccgttactcctcttcccgccgttaacttcagtcttcggcgatcgattcctcggattcttgcttccgctagttcct  4148300                                                                                      --------->HSFC1(1)                                                                                      --------->HSFB2a(2)                                                                                      <---------HSFB2a(2)                                                                                  <---------GLK1(1)       ------>ZmHOX2a(1)                              ------>ZmHOX2a(2)   <---------AHL20(2)     ----------->RAV1(2)      <---------MYB52(1)    --------->ARR11(3)    <---------ICU4  ------>ZmHOX2a(1)       <---------At4g35610     <---------YAB1         --------->AHL20(2) <---------ALFIN1         <---------ZAT2        --------->YAB1        --------->AHL20(2)   <--------- ---->ZmHOX2a(1)          --------->ZAT2     <----------DOF2          <---------AHL20(2) ---------->DOF2 >ARR14(2)           <---------HSFB2a(2)  <---------ARR11(3)      <---------AHL20(2)  <---------HSFC1(1) -------ALFIN1       --------->HSFB2a(2)  --------->ARR11(3)      --------->AHL20(2) <---------LBD16 ->ZmHOX2a(1)    <---------CCA1(2)       <---------CCA1(2)    <---------YAB1   ----------------->AGL1   cctcctctcctgcgtcttcgtctctcgaagctggtatttgtttatatctttgatgatcgtgtttctcattaattaataaatacgatttctggaaagacaa  4148400                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                      --------->MYB59                                                                                --------->ANAC55(2)                             <---------YAB1      <-----------RAV1(1)   <---------ANAC58        <----- ---------->DOF2      <---------WOX13(1)   <----------DOF2             <---------ANAC58 <------ZmHOX2a(1) -ID1               --------->ATHB12   <----------DOF2           <-----------GT1<---------ANAC55(2)--   aacaaaagtatgggtttttgaaagattgactacgattcaagctttctttttatgtgggtttgtttttatactgtcttgagtcacttgttaggaaactatg  4148500  Previous    Next  AGI:  At1g12220.1    Description:  RPS5 (RESISTANT TO P. SYRINGAE 5). Identical to Disease resistance protein RPS5 (RPS5) [Arabidopsis Thaliana] (GB:O64973;GB:O81402;GB:O82098;GB:O82100); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12290.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to RFL1 (RPS5-LIKE 1), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G12210.1); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00216.1); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00218.1); similar to disease r Range:  from: 4144933    to: 4147815    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g12230.1    Description:  transaldolase, putative. similar to transaldolase-like protein [Arabidopsis lyrata] (GB:AAL65638.1); contains InterPro domain Transaldolase; (InterPro:IPR001585); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 4148031    to: 4151023    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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