Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           >>>>>>>>>ARR1         <------------CBF         >>>>>>>>>ARR2         >>>>>>>>>ARR2                                 --------->ZAT14         >>>>>>>>>ARR1                                 <---------ZAT18                              <   <---------STY1(2)                                  <---------ZAT6                --------->CCA1(2)  ------->TEIL                                 ------>ZmHOX2a(1)             --------->YAB1     ----- --------REM1(1) <---------AHL20(2)           --------->ANAC55(2)       ------>ZmHOX2a(1)       ----- ----CBF<------ZmHOX2a(1)      ----------->GT1--------->TOE2(3)        --------->TOE2(3)   <---------   aatgtagctaggattgtattttaagtgggaagaatgtgaaaatatgttccttaatagtgttctctctctgtttcctcaagtataagatagaagaagacaa  4144500                                         <-----------HVH21                                       <-------TEIL                                      <---------ALFIN1                                    <------MYB83                                      --------->ANAC46                                   --------->MYB59                                    --------->ANAC58                             --------------->AGL15                                    --------->ANAC58                             <---------------AGL15                                   --------->ZAT18         --------->YAB1     <-----------------AGL3                                 --------->ZAT14        <---------YAB1      <-----------------AGL2                                 --------->ZAT18 ---------YAB1              <-----------------AGL1        <-----------GT1          <---------ZAT18 ---->ANAC58                <-----------------AG      <---------YAB1               <---------ZAT14 ---->ANAC58             <---------GLK1(1)   <---------At4g35610                 --------->ZAT14 -ID1 --------->YAB1  <---------YAB1<------MYB46(1)   <---------AHL20(2)         <---------ZAT18   gtatgctagtatgatgagttgattttgatttctcaatttggttcgtcagcctattttttattaccctatgtgatcaattccagtgtgcacaccacttgtt  4144600                     <---------AHL20(2)                   <---------CCA1(1)                   <---------RVE1(1)                   <XXXXXXXXXXXXXXXXXXXXXMIR173                  <---------ARR11(3)                                       --------->AHL20(2)                  --------->ARR11(3)                                       <---------AHL20(2)  <-----                ----------->ARR10      <----------DOF2             ----------->GT1  <---------YAB1   tgatgaattgtctctgtggagatttttttttgtaagtgttcctttctcaagtgaaaaactatttctctatggaaaatttaaatgttatttttgtgagttt  4144700                                                        --------->TOE2(3)                               <---------WOX13(1)       --------->TOE1(3)                             --------->ATHB12   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------DAG2                ------>ZmHOX2a(2)               --------->TOE2(3)            <---------YAB1               --------->At4g35610              --------->TOE1(3)         <---------YAB1               <---------At4g35610              --------->YAB1          <---------At4g35610 ----ZAT14    <---------AGP1<---------YAB1--------->ANAC46         <----------DOF2   <----------DOF2   agtaagttccttcgttgatctgagttcaagatgattgcaattctacagaaccataaacccttaaatgttctttgagatgattcttagcttttttgtttgt  4144800                       <---------bZIP60(1)                       --------->bZIP60(1)                    --------->ICU4                    <---------ZAT6                                       <------------CBF    <-------             <---------DOF5.7(2)           <------------CBF      <-----------GT1            ---------            <---------WRKY12          <----------DOF2      --------->ANAC55(2)            --------->ARR11(3)            <---------WRKY45       --------->ARR11(3)     <---------TOE2(3)       <---------ZAT6            <---------WRKY38(1)    <---------ARR11(3)    <-----------GT1>>>>>>>>>EIN3     <---------ARR11(3)   ctattagagattagtcaacgtagtgatgacatactgacatctttggattgtttcaaagtttacgtttttactatacattgactagtcttagagattttat  4144900                                                      --------->GLK1(2)                            --                                                     ------>MYB83                                  --                                                     ------>MYB46(1)                               <-                                                   <---------MYB59                           --------        ----------->GT1                            <---------MYB111(1)                    <---------ANAC58 <---------YAB1                  *TSS              <---------MYB46(2)                     --------->TOE2(3) --AHL20(2)               <----------DOF2         ----------------->AG                    <---------ANAC58 >AHL20(2)          <----------DOF2      ------>ZmHOX2a(1)    ------->TEIL           <----------DOF2   attatgcatatagtgacatagacttttcctttcttatctattcctcttctctacctaatctgtgaatctctctctctcactctctctcttttccttgatt  4145000                                                                                   ----------->GT1             <--------P                                                       --------->At4g35610            <-------GAMYB                                                    >>>>>>>GRF7           <---------MYB46(3)                                               <-----------RAV1(2)           <------MYB83                                                   <-----------HVH21           <------MYB46(1)                                             --------->ANAC55(2)    --------->CCA1(2)                                                  <---------ANAC55(2) ------->ZAT18                                                         <---------ANAC46 ------->ZAT14                                                         <---------ANAC55(1) --------ZAT14                     --------->O2                   <---------MYB46(3)        <-------- ->ATHB12 <---------AtMYB61--------->ATHB12              --------->ZAT14 ----------->HVH21  ---------   gtgcagagatgggaggttgtttctctgtttcattgccatgtgatcaagtagtgagtcagttctctcagttgttatgtgtcaggggaagttatattcacaa  4145100                     --------->ZAT14                     --------->At4g35610                     <---------At4g35610                     <---------ZAT14               <----------DOF2              <---------ANAC58                              <---------bZIP60(1)              <---------ANAC58                              ----------->GT1<------MYB83        --------->ARR14(2)                                  --------->bZIP60(1)        <---------ARR14(2)                         <------NtERF2           <------MYB46(1) ---GT1 --------->GLK1(2)                        --------->ANAC58        <--------P      <---------ZAT14 >YAB1 <---------GLK1(2)        --------->AtLEC2 --------->ANAC58      <---------HSFB2a(1)         <-   tctctccaagaatctggcttctctgcagaaggccatgcgaatgctcaaggctcggcaatatgatgtgataagaaggttggaaacagaagagtttacaggg  4145200                                                   --------->YAB1                                                --------->WOX13(1)                                               <---------ICU4                   --------->ICU4                      <---------TOE1(3)       --------->ICU4               <---------ANAC46          <---------GLK1(1)            --------->ZAT18                 --------->At4g35610          <----------DOF2     <---------ANAC58<---------YAB1         ------>ZmHOX2a(2)         <---------ANAC58     <---------ANAC58<---------ATHB12     --------->ARR11(3)         <---------ANAC58--------->ALFIN1  =================================HOX2a_HOX2a            <-    ---------->DOF2  <-----------RAV1(2)   ------>ZmHOX2a(1)       <---------ARR11(3)       <-------- -----NtERF2    <---------TOE1(2)      <---------ZAT18          <---------TOE2(3)           ---------   cgtcaacaaaggctttcccaagttcaggtatggcttactagtgtcctaatcattcaaaaccagtttaatgatctgcttcgtagtaatgaagttgagcttc  4145300                                                                     --------->ICU4                                               --------->YAB1        <---------YAB1         <----------DOF2       --------->CCA1(2)                   <---------ICU4     <---------ANAC46         --------->ARR11(1)         ---------->DOF2 --------TOE2(3)     <---------At4g35610  --------->At4g35610     --------->ICU4 -At4g35610          --------->At4g35610  <---------At4g35610     <---------YAB1 >At4g35610  <---------TOE2(3)<---------ARR11(3) <---------MYB52(1)--------->YAB1   aaaggttgtgtctttgtggtttctgctccaaagatttgaaattgagctatcgttatgggaaaagagttatcatgatgttgaaggaagttgagagtctcag  4145400  Previous    Next  AGI:  At1g12220.1    Description:  RPS5 (RESISTANT TO P. SYRINGAE 5). Identical to Disease resistance protein RPS5 (RPS5) [Arabidopsis Thaliana] (GB:O64973;GB:O81402;GB:O82098;GB:O82100); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12290.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to RFL1 (RPS5-LIKE 1), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G12210.1); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00216.1); similar to disease resistance protein [Arabidopsis lyrata] (GB:ABB00218.1); similar to disease r Range:  from: 4144933    to: 4147815    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version