Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->AHL20(2)                                                                              <---------AHL20(2)                                                                     <---------MYB59                                                                   <---------ARR11(3)                                                                  <---------CCA1(2)                                                                 <---------ARR11(3)                                                                 <---------AHL20(1)                                                                 <---------AHL20(2)                                                                 --------->AHL20(1)                                                                 --------->ARR11(3) <---------TOE2(3)       <---------REM1(1)   ----------->GT1                  --------->AHL20(2)<-----------TBP ---------->CBF          <------------CBF   <---------TOE2(3)<---------AHL20(2) ----------->TBP  <--- ---------GT1      ----------->GT1      <----------DOF2  --------->AHL20(2) <-----------TBP      <--- ----DOF2         <---------TOE2(3)     --------->TOE2(3)<-----------TBP  --------------->AGL15 <----   atacaatagttgtagcagttaatgtaaaattgaaataatctactttaatgttttcacatatatataatatatctaactatatatataaggctaagtttta  4130000                                                                                                 ----                                                                                                -----                             <---------ICU4                                        <---------AHL20(2)                 --------->ARR11(3)                               <-----------HVH21<---------AHL20(1)                 --------->GLK1(2)                               --------->bZIP60(2)      <----------DOF2      <---------TOE2(3)--------->TOE2(3)                   <---------At4g35610     --------->ARR11(3) ------TOE2(3)   <---------ARR11(3)                 <---------AHL20(2)             --------->AHL20(1) ------TOE1(3)  --------->RVE1(1)     <---------AHL20(2)   --------->At4g35610  --------->AHL20(2)--- -------GT1 --------->AHL20(2)      <---------CCA1(2)--------->AHL20(2)      --------->YAB1  --------   acgaaattaagaaataaaaaatctagcttaatttttgcatatattttagtttatattatttagctccatgtcatagatttcataatatatagctttcata  4130100                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                  --------->ANAC55(2)                                                        <-------                <-----------GT1                       ---------->DOF2                        <------- --------->AHL20(2)                                   =============================================== ----->DAG2--------->AHL20(2)                  <---------YAB1                                <------- ----->DOF2<---------AHL20(2)                <------ZmHOX2a(1)       --------->YAB1         ------>NtERF2 -------->GT1   <---------AHL20(2)         <---------TOE2(3)    --------->AHL20(2)          <------NtERF2 ->YAB1 <----------DOF2                  ---------->DOF2----------->GT1         --------->GLK1(2)   aagttaaatacttttaatttacttaatacatccaaaactcatataaaggatgatacaaaagaaaaaaaaaatcatatgtaagaatttgactggccgcgtg  4130200 -MYC3                                                                                         <----- >MYC3                                                                                         <----- ->TGA1a                                                                                    <-------- --O2              <---------YAB1                                                          <---------ZAT18 --ANAC58        --------->YAB1                                                          --------->PCF2 ->O2<---------LBD16--------->ATHB12                                                 --------->At4g35610 --TGA1a      --------->YAB1              ---------->DOF2                            <---------At4g35610 --ANAC58<---------ANAC46 <---------ARR14(2)        <------ZmHOX2a(1)                <---------ZAT2 ==bZIP_DOF  <---------YAB1   ----------->GT1      <---------YAB1 <-------TEIL       --------->ZAT2 --ANAC46----------->GT1  --------->ARR14(2)      <---------TOE2(3)   --------->ATHB12   <---------PCF5   tcaaatttggggagtataatagtcattggatttgggaaaattacaaaagaattaggataagtgagacgttcgtcattgggcctatcgagctggcccactt  4130300                                                             ----------->TBP                                                           <---------------AGL15                                                           --------------->AGL15                                                          ----------------->AGL3                                                          ----------------->AGL2                                                          <-----------------AGL3                                                        ------>NtERF2                                                        --------->LBD16                                                      <---------LBD16                              <-                                              --------->ARR11(3)                                 ----                                              <---------ARR11(3)                           ---------- -----DOF2                  <---------YAB1    --------->ARR14(2)            <------ZmHOX2a(2)  ------ ----DAG2                   --------->ICU4   --------->RVE1(1)             <---------ARR11(3)  <----- -ALFIN1         <---------MYB59             --------->CCA1(1)             --------->ARR11(3)--------   tagcccatattgttttgagcctaactagtcacgattaagtcacaaaaatatcttcttccggctataaatagcaactagatcatcgccattagcatcaatc  4130400                                                                                      <---------DEAR3(1)                                                                                      --------->DEAR3(1)                                                                                      --------->ATERF1(2)                                                                                     <------NtERF2                                                                                     --------->ATERF1(1)                                                                                    --------->ABI4(1)                                                                                    ------>NtERF2                                                                                    <---------ATERF1(1)                                                                                   --------->RAP2.3(2)                                                                                   --------->RRTF1(2)                                                                                   --------->RAP2.3(3)                                                                                   --------->DEAR3(1)                                                                                   <---------ATERF1(2)                                                                                   --------->RRTF1(3)                                                                                   <---------DEAR3(1)                                                                                   --------->ATERF1(2)                                                                                  --------->ATERF1(1)                                                                                  --------->RRTF1(1)                                                                                  --------->RAP2.6(1)                                                                                  --------->DEAR4(2)                                                                                  --------->ORA47(2)                                                                                 ------>NtERF2                                                                                 --------->ABI4(1)                                                                                 --------->At4g35610                                                                                 --------->LBD16                                                                                 <---------At4g35610                                                                                --------->ANAC46                                                                                <---------ALFIN1                                                                             --------->DEAR3(1)                                                               ------>ZmHOX2a(1)--------->DEAR3(1)                                                               <---------HSFB2a(2)--------->RAP2.3(1)                                                               --------->HSFB2a(2)--------->ERF1                                                            ------>ZmHOX2a(1)--------->AtMYB61                                                          ------>ZmHOX2a(2)  <---------ALFIN1                                                         <------ZmHOX2a(2)  --------->ZAT2  ---------                                                         =============HOX2a_HOX2a<---------ATERF1(1) --------ATHB12                                         <---------ARR14(2)  <---------ZAT2  <-------- ----->WOX13(1)                                         --------->ARR11(3) <---------ATERF1(1)  <---- -->CBF                                                 --------->ARR14(2) ------>NtERF2    <-------- ------>CBF                        --------->At4g35610  <---------ARR11(3)<---------ALFIN1  --------- ----ATHB12                        <---------At4g35610----------->ARR10--------->ANAC58  ----------->HVH21 ->WOX13(1)        *TSS     ---------->DOF2       --------->ATHB12     --------->ANAC58--------->LBD16   aatcaactcagtcttaaactcaaaacattccaaagacatctgaattcgacaatgagtggatcctcctcgagggaagccacctccgccgccggtgatggta  4130500                                           --------->LBD16                                          --------->LBD16                                         <--                                          --------->ANAC55(1)                                    ----                                ------>ZmHOX2a(1)                                            --------                            <---------ALFIN1          ------>MYB46(1)                       ---------    <----------DOF2    ---------->ID1     --------->ANAC58                     <----------DOF2   ---- ------>AtSPL8     <---------ANAC58       --------->ANAC46             <-----------GT1   --------->ANAC46 -------AtSPL8     <---------ANAC46       --------->ANAC58         --------->AHL20(2)  --------->ANAC46 ---TEIL --------->YAB1---------->ARF1   <---------LBD16 <----------DOF2 --------------->AtSPL8  ---- -------AtSPL3     <---------ANAC58   <-----------GT1 ------>MYB83 <---------AHL20(2)  --------->HSFB2a(2) ------>AtSPL3<-----------RAV1(1) <----------DOF2<-----------GT1 --------->TOE2(3)  <-----------GT1   cattttctttatcaaaatgttgcttgtctccctcctcttttaacccggaattaacctatctttgtttcattaatttctgttctttttttccacaacaaca  4130600                                                                                               ------                                                                                              <------                                                                                     <---------WOX13(1)                                                                                   --------->ATHB12                                                                                   --------->YAB1                                                                                  --------->ICU4                                                    <---------MYB46(3)     <-------GAMYB--------->ARR11(3)                                                  <---------MYB52(1)      --------->MYB52(2)  <------ ----ZmHOX2a(1)                                  --------->LBD16          <---------ANAC58    <------ ----->ANAC46                --------->ALFIN1  <---------ZAT14            <---------ANAC58    <------ --->RAV1(1)           --------->ARR14(2)      --------->ZAT14    <------ZmHOX2a(1)<--------ATHB1 >MYB46(3)             <---------ARR14(2)    <-----------HVH21 <------ZmHOX2a(1)  <---------ATHB12 <- ----->ANAC58     ---------->DOF2       <------ZmHOX2a(1)    <---------TOE2(3)    <---------YAB1  <-- ----->ANAC58   --------->CCA1(2)   ---------->DOF2<---------AtMYB61     <---------TOE1(2)   <-------   ggaaactacaaactggagataaaagaatacggtggaggtaaaggaccagtccggtggttttttaaggaggactcgtgcgttgcaatgatagatgttccgg  4130700                                                                                            ---------                                                                                         <---------SPL7                                                                                        --------->ANAC46                                                                                       --------------                                                                                      <--------------                                                                                     ------>MYB46(1)                        --------->ZAT2                                               -------->P                        <---------ZAT2       ----------->GT1                         ------>MYB83 --->LBD16     --------->ZAT2           ============================================MYC_MYB --------- ---ANAC58     <---------At4g35610      <---------TGA1a                             <---------ALFIN1 ---ANAC58     <---------ZAT2           --------->ANAC46                           <---------MYB111(1) ---ANAC55(1) ----------->RAV1(1)       --------->TGA1a                      --------->AtMYB61 ---ANAC46  --------->MYB46(3)          <---------O2                         <---------ALFIN1      <- --------MYB46(3)    <---------At5g28300--------->O2                        --------->MYB46(3) ------ ------P   --------->ANAC58          --------->TOE2(2)                     -------->P--------->MYB52(1) --LBD16   --------->ANAC58          --------->TOE1(2)                   --------->MYB46(3)--------->SPL7   gttgttcagtagcacccagcagttacagcttggagaaaacccacgtagggtttcaaacagaagaagtagaccagaacaaccactccctacccgtacgcac  4130800                                                                                                    <                                                                  <---------ANAC58                  -                                                                  <---------ANAC46                  -                                                       <---------ANAC58        <---------At5g28300  -                                                       <-------GAMYB         <------ZmHOX2a(2)      -                                                       <---------ANAC58 <---------LBD16             - >ANAC58                                          --------->CCA1(2)  <---------ZAT14      --------->MYB46(3) ->AtSPL3                     <---------YAB1     --------->ARR11(3)  --------->SPL7      --------->ANAC58 ----SPL14                  <-----------GT1      <---------ARR14(2)<---------SPL7        --------->ANAC58 >ANAC58                  <----------DOF2        --------->ARR11(1)<---------ZAT18 <---------MYB52(1) ------TEIL             <---------MYB46(3)     ----------->ARR10  <---------ANAC58--------->At5g28300 ->TEIL               <---------At4g35610      <---------TOE2(3) <-----------------------TaNAC69(2)--   atacatcggcttcgtcaagttcccagcggtttacgattcgaagcatgctaagatttgggttgtcaatggcgtactctggatcaccgttactaagcaccaa  4130900  Previous    Next  AGI:  At1g12180.1    Description:  similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT5G47600.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978) Range:  from: 4130419    to: 4131135    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version