Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ----------->HVH21                                         <---------ARR11(3)                           --------->ANAC58           <---------ARR14(2)            --------->ARR11(3)                           --------->bZIP60(2)      <---------ATHB12          <---------WRKY18(1)                                   --------->ANAC46 ----->ZmHOX2a(2)              ----------->HVH21                  --------->ZAT6 --------->ANAC46 -------ARR11(3)             <---------ANAC55(2)              <---------ETT(2) ------>ZmHOX2a(1) ------>ARR11(3)       <---------YAB1   --------->YAB1      --------->AGP1 --------->ARR14(2) ------>ARR14(2)     --------->YAB1    <---------ATHB12   >>>>>>>GRF7      <---------ARR14(2)  ------ ---->TEIL --------->ARR14(2)--------->ANAC55(2)       <-----------HVH21  <---------CCA1(2)<---------ANAC55(2) -------ARR14(2)    <---------YAB1 <---------MYB59  <----------DOF2     --------->YAB1--------->ANAC58   gatcttcaatgagttttcgcttattataaatacttgacccaattatcttgtgacctttgtcaggtctaccactatcgtatcctatgccacgaaacgtgaa  4129300              --------->ZAT18              <---------ZAT14            <---------ZAT18                                     <----------DOF2                     <            --------->ZAT14                                 <----------DOF2                         -       ------>ZmHOX2a(1)                 <---------LBD16  <---------ZAT2 <---------WRKY18(1)       <-      --------->TOE1(3)                 <---------ALFIN1  --------->At4g35610                      <-      --------->TOE2(3)                 ------->GAMYB     <---------At4g35610    <-----------HVH21---   <-----------GT1                     --------->MYB46(3) --------->ZAT2----------->HVH21         --- ---->DOF2--------------->AtSPL8 ---------->ID1          <---------TOE1(2)    --------->O2   --------   agttttttccttagagtactctatccatttagtttgtctcaaccacgggttccaaatcgcagctttctttctccatgaccacgagtcacaaaacaataag  4129400                                                                    <---------ARR11(1)                     --------->ANAC58                               <---------ARR11(3)                     --------->ANAC58                               --------->ARR14(2)                    <-------TEIL                                    <---------ARR14(2)                --------->MYB111(1)                            --------->ANAC58                <---------------AtSPL3                         --------->ANAC58            --------->DAG2                                --------->At4g35610           ---------->DOF2 <---------AHL20(2)           <--------P  --------->ARR11(3)           <---------ZAT14 --------->AHL20(2)       <---------TOE2(3) ------NtERF2   --------->MYB46(2)                  <---------TOE1(3) ---------->HVH21<------MYB83                      --------->MYB52(1)      <----------DOF2 ----------HVH21--------->MYB59                <---------ARR11(3)   <-----------ARR10        <------- --------RAP2.6(3)<---------SPL7               --------->ARR11(3)  <---------CCA1(2)      <---------TOE2(3) ------>ANAC46  <---------------AtSPL8     <------ZmHOX2a(1)   --------->ANAC46   --------->YAB1 ------>RAP2.6(2)<------MYB46(1)         <---------TOE2(3)<---------At4g35610    <---------YAB1 -->DOF2----------->GT1   --------->AHL20(2)   <-----------ARR10   --------->GLK1(1)<---------YAB1   ccgtcacaaggagtaaagtaggtacgcataaaattattcaaataaggaatatctaagggtagctcacgcatatctatcttttgatcatcgttgagattga  4129500                                                                <-------GAMYB                                                               --------->MYB111(2)                                             ----------->HVH21 <---------MYB46(3)                                   <---------ARR14(2)          --------->MYB55(2)                                   --------->ARR14(2)         <--------P                         ----------------->AGL2             <---------MYB46(3)          --------->DAG2                         ----------------->AGL1   <---------MYB52(2)             <----------DOF2                         <-----------------AGL3   --------->ANAC58              <---------ANAC58                         ----------------->AGL3   --------->ANAC46        --------->ATHB12                         <-------TEIL     <------ZmHOX2a(1)--------->ALFIN1     <---------ANAC58                         <-----------------AGL1   --------->ANAC58     --------->MYB52(1)    -------- --WOX13(1)--------->ARR11(3)     <------ZmHOX2a(1)  ------->TEIL     <---------SPL7   ---------->DOF2   cgcttactgaatacatcttggaatcggtccataagaggaactgaggacggacacgaaccaagtggttgttgacgaacgatttgcttttgaaaagtgtgtt  4129600                                                       <---------ARR11(3)                                                       --------->ARR14(2)                                                       <---------ARR14(2)                                              --------->ANAC46                                              --------->ANAC58                               --------                                         <------NtERF2 --------->ARR11(3)                <-------TEIL   <---------ANAC58              --------->CCA1(2)     <-----------ARR10                --------->AtLEC2   <---------ANAC58           <---------ZAT6  --------->ANAC58                   <------ZmHOX2a(1)<-- ->ALFIN1                 <--------P  <---------LBD16  --------->GLK1(2)        --------->ICU4    <--   ccattgtttgcaaacgattttgaatcgggttagagatagaggcggaacacgatagagtatctcttctaccaattcccatggaaggattacatgcatcatt  4129700                                              <---------YAB1                                              --------->AHL20(2)                                              <---------AHL20(2)                                           <---------AHL20(2)                                          --------->YAB1                                         <---------AHL20(2)                                      <---------ARR11(3)                                    <--------                                     <-----------TBP                                        <--------                         ----------->RAV1(1) --------->TOE2(3)                             --------->ARR11(3)                   XXXXXXXXXXXXXXXXXXXX>MIR167A/B                                          <---------ARR11(3)                   XXXXXXXXXXXXXXXXXXXXX>MIR167D--------->YAB1                --------->ANAC58                   <---------At4g35610<---------AHL20(1)         <------ZmHOX2a(1)         <---------GLK1(2)    <---------DEAR3(1)--------->MYB52(1)--------->AHL20(2)      ----------->GT1           <---------RVE1(1) ->ATHB12          --------->At4g35610--------->AHL20(1)       <---------TOE2(3)   --------->DAG2 ----MYB46(1)     ------->TEIL---------->DOF2--------->YAB1   --------->MYB52(1)  ---------->DOF2  <- ----MYB83      ---------->DOF2  ------------>CBF   ---------->DOF2           --------->ANAC58<------   tggtcttcggtgttaccatgaagctaacaacataatgcaatatataatattaataaaagttaactaaggaaaaaaaaaacaagaaaaaggagagattttt  4129800                   --------->AHL20(1)                   <---------AHL20(2)    ---------->DOF2--------->AHL20(2)                                    ----------->HVH21  --------------->AGL15                                                --------->CCA1(2)  <---------------AGL15                                               <---------ARR14(2) ----------------->AG    --------->GLK1(2)                            <---------ARR11(3) -CCA1(1)      <---------AHL20(2)                                     --------->ARR14(2)           -- -RVE1(1) <------ZmHOX2a(1)--------->TOE2(3)                        --------->LBD16               <-- ----------GT1<---------AHL20(2)    <---------YAB1                <---------LBD16             <------ ---AHL20(2)  --------->AHL20(2)  --------->YAB1                  --------->LBD16         --------->REM1(1)   tttactaaaagaggaattaaataaaataatctaaaatcataatatgagtttaaacttagattacattccccagatatgacataatatgtcttacatcttt  4129900                                                                              <-----------TBP                                                                              <---------AHL20(2)                                                                     <---------MYB59                                                                   <---------ARR11(3)                                                                  <---------CCA1(2)                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)                                                                 <---------AHL20(2)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3) <---------TOE2(3)       <---------REM1(1)   ----------->GT1                  --------->AHL20(2)--------->AHL20(2) ---------->CBF          <------------CBF   <---------TOE2(3)<---------AHL20(2) ----------->TBP  <--- ---------GT1      ----------->GT1      <----------DOF2  --------->AHL20(2) <-----------TBP      <--- ----DOF2         <---------TOE2(3)     --------->TOE2(3)<-----------TBP  --------------->AGL15 <----   atacaatagttgtagcagttaatgtaaaattgaaataatctactttaatgttttcacatatatataatatatctaactatatatataaggctaagtttta  4130000                                                                                                 ----                                                                                                -----                             <---------ICU4                                        --------->ARR11(3)                 --------->ARR11(3)                               <-----------HVH21<---------AHL20(1)                 --------->GLK1(2)                               --------->bZIP60(2)      <----------DOF2      <---------TOE2(3)--------->TOE2(3)                   <---------At4g35610     <---------AHL20(2) ------TOE1(3)   <---------ARR11(3)                 <---------AHL20(2)             --------->AHL20(1) ------TOE2(3)  --------->RVE1(1)     <---------AHL20(2)   --------->At4g35610  --------->AHL20(2)--- -------GT1 --------->AHL20(2)      <---------CCA1(2)--------->AHL20(2)      --------->YAB1  --------   acgaaattaagaaataaaaaatctagcttaatttttgcatatattttagtttatattatttagctccatgtcatagatttcataatatatagctttcata  4130100                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                  --------->ANAC55(2)                                                        <-------                <-----------GT1                       =============================================== --------->AHL20(2)                                   ---------->DOF2                        <------- ----->DAG2<---------AHL20(2)                  <---------YAB1                                <------- ----->DOF2--------->AHL20(2)                <------ZmHOX2a(1)       --------->YAB1         <------NtERF2 -------->GT1   <---------AHL20(2)         <---------TOE2(3)    --------->AHL20(2)          ------>NtERF2 ->YAB1 <----------DOF2                  ---------->DOF2----------->GT1         --------->GLK1(2)   aagttaaatacttttaatttacttaatacatccaaaactcatataaaggatgatacaaaagaaaaaaaaaatcatatgtaagaatttgactggccgcgtg  4130200  Previous    Next  AGI:  At1g12170.1    Description:  F-box family protein. Identical to Putative F-box/Kelch-repeat protein At1g12170 [Arabidopsis Thaliana] (GB:Q9FWW7); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G12190.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 4128605    to: 4129699    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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