Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <------ZmHOX2a(1)                                                           ===================HOX2a_HOX2a                                                           ==================HOX2a_HOX2a                                   <------MYB83<---------ANAC55(2)                                   <------MYB46(1)    <-----------RAV1(2)                    <---------TOE2(3)          <---------ANAC58               --------------->AtSPL8                   --------->YAB1<---------ANAC46   --------->TOE2(3)  ------>ZmHOX2a(2)    <--------     <---------ANAC58    ------>ZmHOX2a(2)     <---------ANAC58       <------ZmHOX2a(2)    <---------ANAC58     <---------ANAC58 -------->HAHB4           --------->ANAC55(2)   <---------ARR11(3)    <---------ANAC58 >YAB1          <----------DOF2<---------MYB46(3) -------->P         --------->ARR14(2)<----------DOF2   aaccatttcttgatcagactttaatgatccatgttgttggtattggattacttacctcagaggagagtcgagatcgccttggagtacttctttgctttga  4125200                                                                                                   <-                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                          --------->ARR14(2)                               <-----------HVH21                                          --------->GLK1(2)                              <----------DOF2                                             <---------ARR14(2)                            --------->At4g35610                                         --------->HSFB2a(1)                            --------->ZAT2                                              <---------HSFB2a(1)                            <---------ZAT2                                              <----------TaMYB80                            <---------At4g35610                                    ------>ZmHOX2a(1)                         --------->LBD16                                           <---------LBD16 <-                        --------->ANAC46           <----------DOF2                 <---------HSFB2a(2)                        --------->DEAR3(1)       <---------ZAT18                   --------->HSFB2a(2)                  --------->ZAT2                 --------->ABI4(2)   <---------ALFIN1   --------->HSFC1(2) --DOF2           --------->At4g35610--------->ATHB12   <---------ANAC46--------->AtMYB61<---------ARR14(2)   gactgcaacttctccgaacaagctcaccgcagctttcaccgattggaacggtgctcttgtgtctatttctcccacctccatcgtcctcggagattccgga  4125300                                                    ------>MYB83                                                    -------->P                                                    ------>MYB46(1)  --------------->AtSPL8                          <---------MYB59 ---------DOF2                                    --------->AtMYB61 -->LBD16                                   <---------HSFB2a(2)                                ------ --HSFB2a(2)                                --------->HSFB2a(2)                               <------ ->HSFB2a(2)               <-----------GT1<-----------GT1                                 --------->ANAC46 -LBD16     <---------TOE2(3)  --------->ARR11(3)--------->MYB46(3)                       --------->ANAC58 --------DAG2    <-----------GT1  <----------DOF2--------->DEAR3(2)                       --------->ANAC58   gctttttgtactctaatgttcaccattttctactatcttttttttttcagaaccaacctgcatacacaaacattctctatgcataagaaaacacgaatca  4125400                       ------->MYC3                       <-------MYC3                      <---------ANAC55(2)                                  ------->GAMYB                      --------->O2                                         --------->AtMYB61                      <---------TGA1a                                     --------->MYB46(3)                      --------->TGA1a                                    -------->P                      --------->ANAC46                                  ------->GAMYB                      <---------O2                                     <---------MYB111(1)                   ------>ZmHOX2a(1)    <---------ATHB12               <---------MYB111(2)                   ================HOX2a_HOX2a                         --------->MYB46(3)                 <---------ICU4        --------->ANAC46                <---------MYB55(2)   ---------        --------->YAB1--------->ANAC55(2)          <---------CCA1(2) --------->MYB52(1)   <---------- --->YAB1  --------->YAB1   ------>ZmHOX2a(2)   <---------AHL20(2) <---------MYB52(2)------->TEIL ---ATHB12<---------YAB1----------->HVH21--------->YAB1      ------>ZmHOX2a(1)   <---------ARR11(3)   tagatgagaaacatcataatcctcacgtgatcgtcatttacaatcaacattttatatctaatcctataaactaacaaccacaagatgtatttttacataa  4125500                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              <------                                                              --------->TOE2(3)               <------                                                         <---------ANAC55(2)               <--------P                                            <----------ID1  ------->TEIL                  <-------GAMYB        --------->ICU4               --------->ANAC58    --------->ANAC46 <----------DOF2 <---------ANAC58        <---------YAB1               --------->ANAC46    --------->ANAC55(2)              <---------ANAC58 >ANAC55(2)                          --------->ANAC58   --------------->AtSPL3           <---------MYB46(3) -GT1 --------->REM1(2)       --------->At4g35610       --------------->AtSPL8  <---------ANAC46   <-   caaaaccgtgaagattgcaattggaagaaattagatgaaacgcaaggagacaaatgtatacgtaccttgaatttctctttcttcgtgttcttggttgctt  4125600                                                                                              <------                                                                                              -------                                                           ----------->GT1                <----------                                                           <------MYB46(1)              <------------  <---------YAB1                                           <---------MYB46(3)          -------------- ----DAG2                                                  <------MYB83<---------DAG2  <------------- -----DOF2                                               <---------WOX13(1)            <------------- ---ANAC58                                              <------------CBF     ---------->ID1 <-------- ---ANAC58                 <----------DOF2 --------->MYB52(1)   <---------YAB1    ------------>CBF ---ANAC46                 ------>ZmHOX2a(1)  *TSS     --------->ATHB12------>ZmHOX2a(1)------------- ----------GT1       <---------AHL20(2) --------->YAB1<---------YAB1   <----------DOF2 --------------   ttttcttattgtcttcttgttatataatccttttctcgtctacaataacgggatttttgattggttattaatcctttttgtctcttcaatctatttatag  4125700                                              --------->O2                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                              <---------O2                                              ================================bZIP_DOF                                              --------->TGA1a                                              <---------TGA1a                                              --------->bZIP60(2)                                            <---------ALFIN1                                           --------->DEAR3(1) ----------------------->TaNAC69(2)        --------->MYB46(3) ---HSFB2a(2)        <----------DOF2      --------->ANAC58 -->HSFB2a(2)        ===================================bZIP_DOF -TBP               <---------DAG2        --------->ANAC58 ---AGL15         ------>NtERF2          --------->PCF2                        <---------AHL20(2) --->AGL3        <---------ALFIN1        ------->TEIL                       <---------AHL20(2) ----AGL3     ----------->HVH21         <---------ALFIN1                  <---------YAB1 ----AGL2     --------->ANAC46         <---------ZAT14                 <---------AHL20(2)     <------ -AHL20(2)    --------->ANAC58         --------->At4g35610             <---------YAB1  --------->AHL20(2) -->AGL15     --------->bZIP60(2)      <---------At4g35610         <----------DOF2     <---------AHL20(2) --->AGL2     --------->ANAC58         --------->ZAT14             <---------DAG2--------->TOE2(3) --   aaacttagttgatggcacgacacctttccttctcttctgtctgcacccacgtctctctgtctcaatctccttttttattattttcttaattaatgacttt  4125800                                 ----------->GT1                        --------->LBD16       --------->ANAC46   <---------ARR11(3)  --------->ANAC46     --------->MYB46(3)   --------->GLK1(2)   --------->ARR11(3) <---------LBD16    <----------ID1         <---------GLK1(2)     --------->YAB1 ----DOF2           --------->ARR14(2) --------->YAB1    --------->CCA1(2)    ---------->DOF2 -------->DOF2      <---------ARR14(2)<---------YAB1  <---------TOE2(3)     --------->ANAC46   taaaagctcttcaaaatttcagtttccgcatcaacatgttattagaacaaacaactaagataaacaaattctggttacacaaaagtaaacataacttctc  4125900                                                        --------->ALFIN1                                                      <---------ANAC58                                                <---------YAB1                                              <---------ICU4                                             --------->ICU4          <---------ICU4             -----                                  --------->AHL20(2)  <---------ANAC46                          -----                 <---------ARR14(2)          <---------YAB1      --------->AHL20(2)         <--------                 --------->ARR14(2)<---------YAB1     <---------ANAC58    --------->TOE2(3) ---------        <----------DOF2    <-------TEIL     --------->TOE2(3)----------->GT1 --------->AHL20(2) <----   tgatttgtgtctttttggagatttgtgggttcaaatttttataaaacattattatggggtggaatgtataaatattccataatatagggtctgtttaatt  4126000                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              =======                                                                                              =======                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                          <----------                                                                                          <----------                                                                                         --------->ANAC46                                                                                    <-------MYC2                                                                                    <-------PIF5                                                                                    ------->PIF5                                                                                    <-------MYC4                                                                                    <-------MYC3                                                                                    <-------PIF4                                                                                    ------->PIF4                                                                                    ------->MYC2<XXXX                                                                                    ------->MYC4-----                                                                                    ------->MYC3-----                                                                                   <---------ANAC58                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC55(2)                                                                                   --------->O2<-----                                                                                   ==================        --------->ARR14(2)                                --------->ZAT6           <---------TGA1a        <---------ARR14(2)                             ----------->HVH21           <---------ANAC58     --------->YAB1                                  <---------ANAC58              --------->TGA1a   --------->ANAC58      <---------TOE1(3)           <---------ANAC58              <---------O2------   --------->ANAC58      <---------TOE2(3)           >>>>>>>>>>WRKY18             ------------>OsbHLH66 ---->YAB1         <---------------AGL15         <---------WOX13(1)              <------------OsbHLH66 ---->AHL20(2)     --------------->AGL15        <------------CBF                ----------->HVH21 -AHL20(2)         <----------DOF2             --------->ATHB12               --------->ANAC46------- >AHL20(2)        <-----------------AGL3      --------->AHL20(2)              --------->At4g35610 -----AHL20(2)------->TEIL <------ZmHOX2a(1)  <---------AHL20(2)*TSS        <-----------GT1----------   atatcaagcatatatgcacatctttttaaggaaactgatagtttgacattaattgacttgacactatgaccagcgtaatcacctcacgtgctcgtcacgt  4126100  Previous    Next  AGI:  At1g12150.1    Description:  similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT4G17210.1); similar to Prefoldin [Medicago truncatula] (GB:ABD28587.1); contains InterPro domain Protein of unknown function DUF827, plant (InterPro:IPR008545) Range:  from: 4123528    to: 4125646    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g12160.1    Description:  flavin-containing monooxygenase family protein / FMO family protein. similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G12130.1); similar to FMO-like protein [Thellungiella halophila] (GB:ABJ98059.1); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759) Range:  from: 4126064    to: 4128308    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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