Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->AHL20(2)                                                                   <---------AHL20(2)                                                          <---------AHL20(2)                                                          --------->AHL20(1)             --------->ANAC58                                                         -------->ATHB1                  --------->ANAC58                                                         <---------ICU4   <---------------AGL15                                                         --------->AHL20(2)         --------->ZAT14                                                         <--------HAHB4   --------------->AGL15                                                         --------->YAB1  ----------------->AG                                                         <---------AHL20(2)     <---------------AtSPL8                                                         --------->ATHB51----------------->AGL1                                                        --------->ICU4   <-----------------AGL3        --------->TOE2(3)                               <---------ATHB12 ----------------->AGL3      --------->ARR11(3)                                <---------ATHB51 <-----------------AGL2      <---------ARR11(3)           <---------ANAC58   --------->WOX13(1) ----------------->AGL2     <---------GLK1(2)             <---------ANAC58 <---------ATHB12   <-----------GT1   ----------->GT1 ---------ID1         --------->YAB1              --------->GLK1(1)--------->ATHB51 <---------ZAT14   tactacaaaatctcaaatgaacaatattgatgaaaatgcgtttgtaacacagaaatcaattattttgaattattttccatatatagtacagacgtaaaaa  4104800                                                                            <-----------RAV1(1)                                                                    <------NtERF2                                                                  <---------RAP2.6(2)                                      --------->ANAC58            <---------ANAC46--------------->AGL15                             --------->AHL20(2)                 <---------MYB46(3)<---------------AGL15                     ----------->GT1  --------->ANAC58         --------->ALFIN1   <----------DOF2               <---------AtLEC2       --------->ANAC46         <---------DEAR3(1)<-----------------AGL3            <----------DOF2 --------->AHL20(2)                 <---------AtMYB61 ----------------->AGL3          <---------YAB1  --------->YAB1                   =============================RAV         --------->ARR11(3) <---------AHL20(2)      ----------->GT1<---------MYB46(3)         <---------ARR11(3)<---------AHL20(1)<----------ID1<-----------RAV1(2)   <-----------------AGL2   acatactgtattatctttcatggaagtaaaataattttccaagaaatagaacaaatgtaaaacaggtggtggctaaaactggtgcttttaatggctaatg  4104900                                                 ----------->RAV1(1)                                                --------->ZAT18                    <---------TOE2(3)                                             --------->ANAC58            ----------->GT1                      --------->At4g35610    --------->ANAC58           --------->ALFIN1       <-----                      <---------At4g35610  ---------->DOF2          <------ZmHOX2a(1)   <---------AtMYB61         ----------->HVH21           ---------->DOF2        --------->DAG2         --------->MYB59   ccattgaatcactgacaaaatgaccgatgacttcaacttaaaagttcaagcccacagttccaaaggtagaggaagtggtaaaatttaggtatggtctctt  4105000                                                                  <---------ICU4                                                                  -------->HAHB4                                                                 --------->ICU4                                                                 <---------YAB1                                                                 <---------ATHB51                                                               <---------ICU4                                                               --------->YAB1                                                              --------->AHL20(2)                                      <---------ZAT6          <---------AHL20(2)                                    --------->ZAT14       --------->ICU4                             --------->ARR11(3)         --------->YAB1                             <---------ARR11(3)         <---------ICU4                             --------->AHL20(1)        <---------YAB1                         <------                      <---------HSFB2a(2)  --------->ZAT6 <---------YAB1                      -------                      --------->HSFB2a(2) <---------At5g28300<---------YAB1     <---------ATHB12                  <----------DOF2   <---------ZAT14    --------->ICU4         --------->WOX13(1)   <- -----DOF2   <-----------GT1--------->AHL20(2)      --------->ICU4<---------AHL20(2)        ---------   tctctctctctcaattttctctttctacaaatatatactacagttacagtagtagttattattattaattattctctccccaatcaaacaacactcatca  4105100          <-----------HVH21        ------->MYC3        <-------MYC3      ------->MYC3     <---------TGA1a     --------->TGA1a        <---------ARR11(3)     =====================bZIP_DOF                                      <----------DOF2   <---------ALFIN1         --------->AHL20(1)                          <---------DAG2 ---At4g35610  <----------DOF2               --------->AHL20(2)   --------->AHL20(2) -->At4g35610  <---------DAG2           <---------YAB1       ------------>CBF ----------HVH21            --------->AHL20(2)            --------->AHL20(2)  <-----------GT1 >YAB1<-------MYC3          <---------AHL20(1)      --------->YAB1--------->YAB1                   --   gagtcacacatgtgtcacttttttcttcaatattttagttttatgaataaaaaatcaaaataaaacaataaaaacttttttaacttggctagtttcccag  4105200                                                                                         --------->LBD16                ------->GAMYB  ----------->RAV1(1)                                      --------->ANAC46               <---------MYB52(2)                                            <----------ID1      ----          ------->TEIL         *TSS            <---------ARR11(3)  <----------DOF2  <---------ALFIN1 --------->TBP --------->MYB46(3)  ---------->DOF2          --------->MYB52(1)  --------->MYB46(3)   tataaatagatgtatcaacgaacacatttaagaccacaaaagaaaccaagagctctcaaacaaaacagccttttacataagaacaaacacccccaaaaac  4105300                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                              <---------ANAC58                   <---------YAB1                                            --------->ATHB12                  --------->TOE2(3)                                  ------>ZmHOX2a(1)                =====================================HOX2a_HOX2a <---------ARR11(3)               ---                --------->ICU4                                   --------->ARR11(3)             <----                <------ZmHOX2a(2)                               --------->GLK1(1)               <----                <---------YAB1                ------>ZmHOX2a(1) <---------GLK1(1)               <----               <---------ARR11(3)             --------->LBD16  <---------ARR11(3)              ------     ---------->DOF2                        ----------->RAV1(2)--------->ARR11(3)        ------------ ------->GT1   --------->ARR11(3)  <---------ARR11(3)        <---------YAB1 <---------YAB1     ------   tgcaaaaaaaagagagagatcattaatccatcttcaagatgtctcttcctgaaactaaatctgatgatatccttcttgatgcttgggacttccaaggccg  4105400                                    --------->RRTF1(3)                                    --------->DREB2C(2)                                    --------->RRTF1(2)                                    --------->RAP2.3(2)                                    --------->RAP2.3(3)                                    <---------ATERF1(2)                                   --------->ERF1                                   --------->DEAR4(2)                                   --------->RRTF1(1)                                   --------->RAP2.6(1)                                   --------->RAP2.3(1)                                   --------->ORA47(2)                                  <---------ATERF1(1)                                  <---------RAP2.3(1)                                 --------->DEAR3(1)                                --------->ATERF1(1)                                <---------ABI4(2)                                <---------At4g35610                                --------->At4g35610                                <------NtERF2                               <---------ATERF1(1)                       <---------At4g35610                       --------->At4g35610                       <---------ZAT2------>NtERF2                       <-------GAMYB--------->DEAR3(1)                       --------->ATERF1(1)                       ----------->RAV1(2)                      <---------RAP2.3(1)                      <---------MYB46(3)                      --------->MYB55(2)                      <---------DEAR3(2)                      <---------ERF1--------->RAP2.6(2)       ------>ZmHOX2a(2) <---------ATERF1(1)      <------ZmHOX2a(2)<------NtERF2--------->ATERF1(2)     <---------ARR14(2)--------->ZAT2<---------RAP2.6(3)   --------->DEAR3(1) ------>NtERF2<------NtERF2                                             ------>MYB46(1)  <------NtERF2       <---------ATERF1(1)                                                 --------->MYB46(3) ------>NtERF2       <---------RAP2.3(2)                                     >>>>>>>ZML2 -------->P --------->LBD16     <---------RAP2.3(3)                                     --------->HSFC1(1) ------>SPL7         <---------ATERF1(2)   <---------GLK1(2)                 <---------HSFB2a(2) -----RAP2.6(3)      --------->ATERF1(2) <---------YAB1                      --------->HSFB2a(2) -------HVH21        <---------DEAR3(1)  --------->ICU4                      <---------HSFC1(1) -----SPL7          --------->ATERF1(1)  <---------ATHB12      <---------ANAC55(2)   --------->ANAC58 --->DEAR3(1)      <---------ATERF1(1)<------NtERF2            --------->ANAC55(2) ---------->DOF2  < --------->WRI1  --------->DEAR3(2)--------->ATERF1(1)    --------->YAB1  --------->ARR11(3) ------>MYB83 --->RAP2.6(2)  --------->MYB52(1)------>NtERF2        --------->YAB1 ---------->DOF2--------->ANAC58   tcccgccgatcgctcaaaaaccggcggctgggccagcgccgccatgattctttgtaagtataatcacataataaaagttctagagaaaagctaccaacaa  4105500                                                                     <---------YAB1                                                                   --------->YAB1                                                                  <---------YAB1          --------->HSFB2a(2)                             <---------AHL20(2)                   <---------ATHB12 --------->ANAC55(2)              --------->ANAC58                          <---------ANAC58      <----------DOF2    ---- -------TEIL  --------->ANAC58                          <---------ANAC58<---------YAB1    <---------HSFB2a(2)   tatacatgctgaagacaagaattgaaactttttaatggcatttactaagttataagtttcttatggctatcattcttattcttttatgtattctcgatgt  4105600                                                                                                  <--                                                                                                 <---                                                                      --------->MYB52(1)       ------                                                                   --------->ANAC55(2)      <--------                                                                   <------MYB83             ------->TEIL                                                                   <---------ANAC55(2)      ---------                                                                   <------MYB46(1)       <---------ANAC55(1)                                   --------->ARR11(3)             --------->MYB46(2)     --------->ANAC55(2)                                 <---------TOE1(3)         <---------ETT(2)              <---------ANAC58                                 <---------TOE2(3)      ----------->TGA1                 <---------ANAC55(2)                      --------->AHL20(1)              --------->At4g35610                <---------ANAC58                      --------->AHL20(2)        --------->REM1(2) --------->MYB59        <---------ANAC46          --------->TOE2(3) <---------ANAC58   --------->ALFIN1   --------->MYB52(2)    <------------         --------->YAB1     <---------ANAC46 <---------ANAC58     --------->MYB111(1)   ----------->STF1        <---------YAB1<---------AHL20(2)     <---------ANAC58    <---------MYB55(1)    <---------TGA2(2)    <----------DOF2   <---------YAB1         <---------ANAC46   <---------MYB52(1)    ----------->HVH21    <---------DAG2   --------->AHL20(2)    ------>NtERF2----------->HVH21             ----------->TGA1 --->TEIL<--------HAHB4     <---------ANAC58<-----------------------TaNAC69(2)      --------->At4g35610   atccaactttatcattaacaaaattttattgtgtgaaggtattgaggccgtggagaggctgacgacgttaggtatcggagttaatctggtgacgtatttg  4105700  Previous    Next  AGI:  At1g12110.1    Description:  NRT1.1 (NITRATE TRANSPORTER 1.1); transporter. Identical to Nitrate/chlorate transporter (CHL1) [Arabidopsis Thaliana] (GB:Q05085); similar to nitrate transporter (NTP2) [Arabidopsis thaliana] (TAIR:AT2G26690.1); similar to nitrate transporter [Brassica napus] (GB:CAC07206.1); similar to RCH2 protein (GB:AAA80582.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16500.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 4105231    to: 4109543    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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