Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->ZAT14                                                                              <---------ZAT14         --------->TOE2(3)   <---------ARR11(3)                              --------->ALFIN1       <---------ATHB12      --------->AHL20(1)                           <-----------------------TaNAC69(2)       --------->ICU4        --------->ARR11(3)                           <---------DEAR3(1)    ----- -------->At4g35610      ---------->DOF2 <-------TEIL                     --------->ALFIN1    ------>NtERF2 ---------At4g35610  <---------ZAT6   <------MYB83                    ---------->DOF2      --------->At4g35610 ------ANAC58  <------ZmHOX2a(1)      <------MYB46(1)             --------->TOE1(3)        <---------At4g35610 ------ANAC58<---------TOE2(3)--------->CCA1(2)                   --------->TOE2(3)    --------->MYB52(1)   tttgctgcaaacattaaggagtagacttaaagatattgggaggttcaagttgattccaagaatgttagccttaagagcggtgcagagacaaacggctgcc  4090300                                               <---------ANAC58                                               <---------ANAC58                                               <---------ANAC46                                              <------NtERF2                    <---------At4g35610                                      <---------WRKY18(1)                   --------->WRKY38(1)                                     --------->ETT(2)                      <---------MYB52(1)                                     ----------->HVH21                   <---------MYB46(3)         <                                   <---------ANAC58                 <------ZmHOX2a(1)               -                              <---------AtLEC2<-----------------------TaNAC69(2)           --------->DEAR3(1)                              <xxxxxxxxxxxxxxxxsmallRNA(fl3)     <---------LBD16           --------->RAP2.3(3)                          <------NtERF2    <---------MYB52(1)    <-----------RAV1(2)     --------->ZAT18                          <---------At4g35610<---------MYB46(3)  <---------HSFB2a(2)     --------->ZAT14                          --------->At4g35610------>NtERF2--------->WRKY18(1)  <---------ZAT18   ---- ---->TOE2(3) ------>ZmHOX2a(1)    <---------ANAC58      <-----------HVH21<-------GAMYB  <---------ZAT18   tcaacatcagcgagtccttggatgaggctgcagcatggctcgaccggtggcttgccaagggtcaagtccaggaggccgttgagcacattagcgcagacac  4090400                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              ------>NtERF2                                                                                              <------                                                                                              -------                                                                                              <------                                                                                             --------                          <---------ANAC58           <------MYB83                 <xxxxxxxxxxxxxxxxxx                          <---------ANAC58           <---------MYB46(3)  <---------ANAC58    --------                       ------->PIF5                  <------MYB46(1)     <---------ANAC46    <-------             <----------DOF2                <---------ANAC58        <----------DOF2       ------->GAMYB  <----------DOF2      <-------PIF5  --------->ZAT2 <---------AtMYB61    <---------ANAC58 --------->AtMYB61 ---------ZAT2       ------------>OsbHLH66  <---------ANAC58<------ZmHOX2a(1)    --------->ALFIN1<--- -------->ZAT2     <---------ZAT18   <---------ZAT2<--------P      <---------ANAC58      --------->MYB46(3) ----->DEAR3(1)    --------->ZAT18  --------->AGP1<-------GAMYB    <---------ANAC58     -------->P---   cgagcttgagggtgtctttagggcacttgctcgagccagagctagggcttggggttggtttaggagttggctttggcttgggagaggggcaacctccgcc  4090500      <---------ZAT14 -------->ANAC58 -------->ANAC46 -------->ANAC58 ------->SPL7 -------ALFIN1 ---NtERF2 -->NtERF2 ----->ABI4(1) ---->DEAR3(1) ---->RAP2.3(2) --->ANAC46 --->RAP2.3(1) --->ATERF1(1) -->At4g35610                                                                      --------->ICU4 ------------SPL14                                                               <---------------AGL15 -->LBD16            --------->LBD16                                             --------------->AGL15 ---ATERF1(1)       <---------ANAC46                                            <-----------------AG< ->ANAC46--------->At4g35610                                                    ----------------->AGL1 xxxxxsmallRNA(si3)<---------LBD16                                              <-----------------AGL2 ->DEAR3(1)   --------->AtMYB61                                                 ----------------->AGL2 --ALFIN1<---------At4g35610  ----------->GT1              ---------->DOF2      <-----------------AGL3 ------SPL7 -------->P<------NtERF2                     --------->ANAC58        ----------------->AGL3 ------>SPL1(1) <-----------RAV1(2) ---------->DOF2     --------->ANAC58    ---------->DOF2    ------   gcacggagtacagctaccacaggcggagattgttgtgaaaaagagaagattgagagccaagaaaagagctatggaacttgaagccatttttggtatatag  4090600                     <------MYB83                 --------->ZAT2                 <---------STY1(2)                 <---------ZAT2                     ---------->DOF2                 --------->STY1(2)        ----------->GT1             --------->STY1(2)         --------->ALFIN1                                             <        <-----------GT1              <---------ANAC58                        <---------MYB46(3)     <       --------->ZAT14    <---------YAB1 --------->ALFIN1         <------MYB83                     <- ---------ARR14(2)   <------MYB46(1) <---------ANAC46             <------MYB46(1)                  <- ----->GT1   <---------STY1(2)       <---------ANAC58        <---------TOE2(3)         ---------->DOF2   aaaatactgtttactagctagctaggttgtgagtgaattgggtgtggagaaaatgaaagaattgagataggttttatagtggtttcaagaaaagcccaag  4090700                                                                           --------->AHL20(1)                                                                           <---------AHL20(2)                                                                           <---------YAB1                                                    -------->HAHB4        <---------AHL20(2)                                           ----------->GT1             <---------ICU4              <---------ARR11(3)          --------->YAB1        --------->ICU4  --------->ATHB12      <------ZmHOX2a(2)                   <---------ICU4      --------->YAB1 <------------CBF      --     <---------ARR14(2)                --------->YAB1 <---------WOX13(1)  --------->AHL20(2)       --     --------->ARR14(2)        <-----------TBP      --------->ATHB12  <---------YAB1            -----  --------->SPL7       *TSS  <---------AHL20(2)    <---------YAB1   --------->YAB1          --------- -----------HVH21   --------->ATHB12 ------------>CBF<------------CBF --------->ICU4        <-------- ---------SPL7--------->ARR11(3)    <-----------GT1<---------ATHB12<---------YAB1     ----------->GT1 --------ANAC58    <---------YAB1   --------->YAB1 --------->ICU4--------->YAB1 <---------ICU4 <----- --------ANAC58--------->CCA1(2) --------->YAB1<---------YAB1<---------YAB1--------->AHL20(2) -------   agcgtccgatccataagatatatgatgggatttttttataacaataagtataaatgattgactaccattatcataattttattgattacagtaatatata  4090800                                                                                              -------                                                                                             <-------                                                                                         ----------->GT1                                                                                    --------->ANAC58                                                                                    --------->ANAC46                                                                                    --------->ANAC58               <---------WOX13(1)                                                   --------->ANAC55(2)      <------------CBF                                                             <-------TEIL  ---------->DOF2                                                                 --------->ARR14(1) ------->AHL20(2)                                                                 --------->CCA1(2) ------->YAB1 <------------CBF                                                   --------->TOE1(2) ---->YAB1   <--------ATHB1                <---------AtLEC2                      <---------ARR14(2) >AHL20(1)  <---------YAB1                ------->TEIL                           --------->ARR14(2) -AHL20(1) <---------WOX13(1)             <-------TEIL                           --------->ARR11(1) ----AHL20(2)--------->ATHB12         <---------------AtSPL8                   ----------->ARR10<---- -->AHL20(2)--------->ICU4          --------->ICU4                <---------MYB52(1)<---------ANAC55(2)   ataaaaaagattgaatgattgaaattagggaccttgaaattatgtacatggaagtttacacattgtccatttgtttatatgaagatacgaaatgtattat  4090900                <---------ANAC58                                      <---------ARR14(2)                <---------ANAC46                                      --------->ARR14(2)                <---------ANAC58                                    =============HOX2a_HOX2a           --------->ARR14(2)                                       ------>ZmHOX2a(2)     --------->bZIP60(1)                                          --------->ARR14(2)     --------->TGA2(1)                                           =============HOX2a_HOX2a     <---------bZIP60(1)                                         <------ZmHOX2a(1)     <---------TGA2(1)                                   --------->ANAC46 -->YAB1   <---------ICU4                                --------->ANAC58 ------>ZmHOX2a(1)        -- --YAB1    <---------ARR14(2)                          --------->ANAC46<------ZmHOX2a(2)       ------ -----YAB1--------->ICU4                    <-------GAMYB--------->ANAC58--------->TOE2(3) ------->TEIL   aactgtgatgtcatatttgcttatagttttgggataaactcgttgtcgttgtaatctacgcgaaacaggatcgatcctcaactagtatagatgtatgtat  4091000                        <---------ICU4 --------->YAB1 --------->YAB1 <---------ICU4 --------->YAB1 <-                     <---------ICU4 --------->YAB1 <---------ICU4 <---------ICU4 <---------ICU4 -----                     --------->YAB1 <---------ICU4 --------->YAB1 --------->YAB1 --------->YAB1 <----                    --------->ICU4 <---------YAB1 <---------YAB1 <---------YAB1 <---------YAB1 <-----                    <---------YAB1 --------->ICU4 --------->ICU4 --------->ICU4 --------->ICU4 ------                  --------->YAB1 --------->YAB1 <---------ICU4 <---------ICU4 --------->YAB1 <-------                  <---------ICU4 <---------ICU4 --------->YAB1 --------->YAB1 <---------ICU4 --------                 <---------YAB1 <---------YAB1 --------->ICU4 --------->ICU4 <---------YAB1 ---------                 --------->ICU4 --------->ICU4 <---------YAB1 <---------YAB1 --------->ICU4 <--------               --------->YAB1 --------->YAB1 --------->YAB1 --------->YAB1 --------->YAB1 <---------ICU4              --------->ICU4  <---------ICU4 <---------ICU4 <---------ICU4 <---------ICU4 --------->YAB1              <---------YAB1 --------->ICU4 --------->ICU4 <---------YAB1 --------->ICU4 <---------YAB1            <---------ICU4 <---------ICU4 --------->YAB1 <---------ICU4 --------->YAB1 --------->YAB1            --------->YAB1 --------->YAB1 <---------ICU4 --------->YAB1 <---------ICU4 <---------ICU4           --------->ICU4 <---------YAB1 --------->ICU4 <---------YAB1 --------->ICU4 --------->ICU4         --------->YAB1 --------->YAB1 <---------ICU4 <---------ICU4 --------->YAB1 <---------ICU4 --         <--------HAHB4<---------YAB1 <---------YAB1 --------->ICU4 <---------YAB1 <---------YAB1 <--   ------->TEIL<---------ICU4<---------YAB1 <---------YAB1 --------->ICU4 <---------YAB1 --------->ICU4 ----->TEIL<---------YAB1 --------->ICU4 <---------YAB1 --------->ICU4 <---------YAB1 <---------YAB1 ->TEIL <---------YAB1 --------->ICU4 --------->ICU4 <---------YAB1 --------->ICU4 --------->ICU4 ---   gtatgtatgtattattattattattattattattattattattattattattattattattattattattattattattattattattattattattatt  4091100     --------->YAB1 <---------ICU4 --------->YAB1 --------->YAB1 --------->YAB1     <---------ICU4 --------->YAB1 <---------ICU4 <---------ICU4 <---------ICU4    <---------YAB1 <---------YAB1 --------->ICU4 --------->ICU4 <---------YAB1    --------->ICU4 --------->ICU4 <---------YAB1 <---------YAB1 --------->ICU4  --------->YAB1 --------->YAB1 <---------ICU4 <---------ICU4 <---------ICU4  <---------ICU4 <---------ICU4 --------->YAB1 --------->YAB1 --------->YAB1 --------->ICU4 --------->ICU4 <---------YAB1 <---------YAB1 --------->ICU4 <---------YAB1 <---------YAB1 --------->ICU4 --------->ICU4 <---------YAB1 --------ICU4 --------->YAB1 --------->YAB1 <---------ICU4 <---------ICU4 ---->YAB1 <---------ICU4 --------->YAB1 --------->YAB1 <---------ICU4 -----ICU4 --------->YAB1 <---------ICU4 <---------ICU4 --------->YAB1 ----YAB1 --------->ICU4 --------->ICU4 <---------YAB1 --------->ICU4  --------->ATHB51 --->ICU4 <---------YAB1 <---------YAB1 --------->ICU4 <---------YAB1 <---------YAB1 --ICU4 <---------ICU4 <---------ICU4 --------->YAB1 <---------ICU4 --------->YAB1 ->YAB1 --------->YAB1 --------->YAB1 <---------ICU4 --------->YAB1 <---------ICU4 >ICU4 <---------YAB1 --------->ICU4 --------->ICU4 <---------YAB1 <---------YAB1            -------- -YAB1 --------->ICU4 <---------YAB1 <---------YAB1 --------->ICU4 --------->ICU4            <------- ------->YAB1 <---------ICU4 <---------ICU4 --------->YAB1 --------->YAB1               <-----------GT1 -------YAB1 --------->ICU4 --------->ICU4 <---------YAB1 --------->ICU4               --------->AHL20(2) ------>ICU4 <---------YAB1 <---------YAB1 --------->ICU4 <---------YAB1       <---------ANAC46     <   attattattattattattattattattattattattattattattattattattattattattattattattattattgttttgtgcaaataactagcta  4091200  Previous    Next  AGI:  At1g12090.1    Description:  ELP (EXTENSIN-LIKE PROTEIN); lipid binding. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT1G62510.1); similar to extensin-like protein [Brassica napus] (GB:AAK30571.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 4089845    to: 4090723    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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