Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ------->TEIL                                                                    <---------ANAC55(2)                                                                    --------->ANAC55(2)                                                                   --------------->AtSPL8                                                                   --------------->AtSPL3                                                                   <---------------AtSPL3                                                                  <---------DOF5.7(2)                                                                --------->DOF5.7(2)                                                                <---------MYB52(1)                                                               <---------DEAR3(2)                                                               --------->LBD16                                                              <---------ATERF1(2)                                                             <------NtERF2                                                             <---------LBD16                                                            ------>NtERF2                                                           <---------ETT(2)                                                           <---------DEAR3(1)                                                           --------->ETT(2)                                                          --------->ATERF1(1)                                                      <---------At4g35610       <---------ANAC58                               ----------->RAV1(2)       <---------ANAC58                               --------->At4g35610<---------DAG2       <------MYB46(1)                                <---------ZAT2<---------ANAC58       <------MYB83                                   --------->ZAT2<---------ANAC58       <---------ANAC46                     ------>NtERF2<-----------HVH21<----------DOF2           -  <-----------RAV1(1)                      --------->DREB2C(2)--------->ATERF1(2)        --------->AHL20(2) --GAMYB                                   --------->DEAR3(1)<---------ANAC46            --------->YAB1 ---MYB46(3)                             <---------At5g28300<---------RAP2.3(1)       --------->YAB1< ---->GT1                ----------->GT1<---------ALFIN1 <---------ATERF1(1)       --------->TOE2(3)- ----------WRI1   --------->AtLEC2    <-----------HVH21 <-----------RAV1(1)  --------->YAB1  --------   tacaatgttgggtttggaacatgcacagggaaaattgttccttcaccgccttgatcagctgtcgccggtaacgtaccttttataacattaataaaaaaaa  4075900     ----------->RAV1(2)     <---------At4g35610                                                                       ------     --------->At4g35610                                                                   <---------YAB1  <---------MYB52(1)                                                                     --------->YAB1  ----------->HVH21                                                                   <---------ICU4 <-----------TGA1                                                              --------->GLK1(1) <-----------HVH21                                        <------ZmHOX2a(1)    <---------GLK1(1) -------->ANAC55(2)                             <----------DOF2               --------->ARR11(3) ---------ANAC55(2)                             <---------DAG2                <---------ARR11(3) -------->ANAC46                             <-----------GT1     ----------->GT1   --------->TOE2(3) ->AHL20(2)                       --------->ATHB12--------->ATHB12    ---------->DOF2 --------->YAB1   tcccgtcacctgaattgtttacagaaaaaatggaattgatgggagtatcactttattgcaggaaaaatggtgaaaagaaagatttccataatcacgatta  4076000                                             <---------TOE2(3)                                             ------------>CBF                                     --------->ANAC58                                     >>>>>>>>>MYB98                                     ------>MYB83                 <---------AHL20(2)  ------>MYB46(1)                 <---------YAB1      -------->P                                             ---------              ------->TEIL           --------->ANAC58                                    <----------DOF2         --------->CCA1(2)          <---------ALFIN1                  <---------ZAT6  ------->TEIL        --------->ARR14(2)         <---------ALFIN1                   ----------->GT1<---------GLK1(2)        <---------ARR14(2)       ------->GAMYB --------->YAB1     <---------YAB1  --------->ANAC55(2)     <---------ANAC46   <---------At4g35610 --------->YAB1  --------->HSFB2a(2) <-----------GT1    -- ---->DOF2 <---------YAB1  --------->At4g35610--------->ZAT6<---------HSFB2a(2)<<<<<<<<<MYB98  ------   agcacttggggatatgaatattattaagcagataaccccaacccattaacaataagtcatttctcgatattagtgtaatatgttactgaatcttttataa  4076100                                                                              <-------GAMYB                                                                             <---------DEAR3(2)                                                                             <------MYB83                                                                             <------MYB46(1)                                            --------->YAB1                  <---------DREB2C(2)                                            <---------ICU4                  --------->MYB55(2)                                           <---------YAB1                   <---------MYB46(3)                                   ----------->GT1                          <---------DEAR3(1)        ------->GAMYB             --------->DAG2                          <-----------HVH21       --------->ANAC58          ---------->DOF2                <----------DOF2 <---------MYB46(3)     --------->MYB52(1)       ----------->TBP       ----------->GT1      ------->GAMYB >YAB1 --------->ANAC58      --------->AHL20(2)    <---------ZAT6     --------->MYB52(1)           -- -------->DOF2          ------------>CBF --------->YAB1         ------>ZmHOX2a(1)       --------->ANAC46 ---->DOF2            <----------DOF2   --------->ICU4   --------->ICU4 --------->MYB46(3)--------->ANAC46   agaaagacaacggaatattagtaactttcaatataaaaagtgataatcatcgagtggtaatgagtcctttagcaacggtcggtcgtttatacacaaaaac  4076200            <----------DOF2     <------------CBF    --------->ATHB51    <--------ATHB1    -------->ATHB1    <---------ICU4    --------->ATHB12                                                           <-----------HVH21    >>>>>>>>>>AGL20                                                           --------->DEAR3(1)    >>>>>>>>>>AGL24                                                           --------->DREB2C(2)    >>>>>>>>>>AGL22                            --------->ANAC46            <---------ALFIN1    --------->YAB1                       <-----------TBP                   --------->AtMYB61   <---------ATHB51                    --------->AHL20(2)                 --------->MYB46(3)   <---------ATHB12                    <---------AHL20(2)               ------->GAMYB   --------->ICU4                  <---------YAB1                      --------->MYB46(3) ---------->CBF               ----------->GT1<-----------GT1         --------->MYB52(1)     ---------   tttcaataattggtctttgcaaaattactagggagttatatttatttataccacattcacgagttatatactaacgaccaccgtcaaaaaaaaaaacaat  4076300                                                                     ------->GAMYB                                                                     --------->AtMYB61                                                                     <---------ALFIN1                                                                    --------->MYB46(3)                                                                    <---------MYB55(2)                                                                    <---------MYB52(2)                                                                   -------->P                                                        <---------ETT(2)  <---------MYB52(1)             ---------->DOF2                            --------->ETT(2) --------->At5g28300          --------->ANAC58                   --------->KAN4(2)    ------->GAMYB<-----------GT1<------   --------------->AGL15                    <---------HSFB2a(1)  <---------MYB111(2)       --------->YAB1   <---------------AGL15 --------->AHL20(2) --------->HSFB2a(1)  --------->MYB46(3)        <---------ICU4 --->CBF  --------->ANAC58           <-------TEIL<---------YAB1  <---------MYB55(2) <----------DOF2   ctcatccatatcaagaaaagaaaacaaaaaaatgaaacgttcaagaaaattctcatcgtcgacaacaacaaccaccgttattcacactttctataatgac  4076400                                                                                       --------->ZAT2                                                                                       --------->At4g35610                                                                                       <---------ZAT2                                                                                      ----------->RAV1(1)                                                                                     <------NtERF2                                                                                     <-----------RAV1(2)                                                                                    ------>NtERF2                                                                                    <------NtERF2                                                                                    <---------At4g35610                                                                                    --------->LBD16                                                                                    --------->At4g35610                                                                                   --------->RRTF1(2)                                                                                   ----------->RAV1(1)                                                                                   --------->RAP2.3(2)                                                                                   --------->DEAR3(1)                                                                                  --------->RRTF1(1)                                                                                  --------->RAP2.3(1)                                                                                 --------->ABI4(1)                                                                                 ------>NtERF2                                                                                 <---------ATERF1(1)                                                                                ------->GAMYB                                                                                <---------ALFIN1                                                                                --------->AtMYB61                                                                                --------->DEAR3(1)                                                                                --------->DREB2C(2)                                                        --------->ANAC58       --------->DEAR4(2)                                                        --------->ANAC58       --------->DEAR3(2)                                                      ---------->DOF2          --------->MYB46(3)                                                    --------->ANAC58           <------NtERF2                                                    --------->ANAC58           --------->ATERF1(1)                                                   <------NtERF2              --------->ABI4(1)                                                  ------>NtERF2               ------>NtERF2                       --------->GLK1(1)         --------->DEAR3(1)          --------->DEAR3(1)                  ---------->DOF2                ----------->HVH21           <---------ALFIN1                 ------->GAMYB                   <---------DEAR3(1)       --------->ANAC58      <----                --------->MYB46(3)              --------->RAP2.3(1)       ------->GAMYB<---------At4g35610               --------->ANAC58                --------->LBD16            --------->ANAC46     <xxxxx               --------->ANAC58                --------->ANAC46           --------->ANAC58     <-----           ------>NtERF2                      --------->ATERF1(2)       --------->MYB52(1)     ======           --------->LBD16  --------->LBD16   <---------ATERF1(2)     <---------MYB52(2)       ======         --------->SPL7<---------GLK1(1)     <---------LBD16--------->MYB52(1)<---------ATERF1(1) -----GT1<---------LBD16    <---------YAB1  --------->MYB52(1) --------->TOE2(3)--------->ANAC46-----   catactacccctccggcaaccaaagaaatcccgattgaaactccattaccggcgacgaaagccaacgtcaaaacaaacgccaccgccgcagcagcgagga  4076500                          --------->ANAC46                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)             <---------ATHB12                       --------->ARR14(2)           --------->WOX13(1)                       <---------ARR14(2)   --------->GLK1(2)               <---------ZAT14 -----ARR14(2)        <------ZmHOX2a(1)     <-----------ARR10               --------->ZAT14 xxxxxxxxxxxxxxxsmallRNA(se3)          --------->ANAC58     <---------HSFB2a(2) -ZmHOX2a(1) <---------MYB52(1)        --------->ANAC46    <---------LBD16<---------ZAT14        ---- ==============================HOX2a_HOX2a  <---------ARR11(3)            --------->ZAT14        ---- ===============================HOX2a_HOX2a --------->ARR11(3)         <---------ANAC46   --------->MYB52(1) ---->ARR14(2)  <---------YAB1         --------->ANAC58 --------->WOX13(1)--------->REM1(2)  ------->GAMYB   ttcagtctggctaccgttcttataggatccgaaacctatacaagaaaatctcatccatcaatcgggaagcgaaccgtgtacagagcataatccaacggca  4076600                                                                                                    =                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   ==                                                                                                  <--          ------>NtERF2                                                                           ---         --------->ANAC58                                                                         ---         --------->ANAC58                                                                       -----         --------->ANAC46                                              --------->HSFB2a(2)--------->LBD16 ----->ANAC58                                        --------->GLK1(2) <---------HSFB2a(2)<---------TOE1(2) ----->ANAC58                              <---------KAN4(2)      <---------At4g35610<-----------HVH21   agaaacagtagacgccattagaagcgatgagaaggaacgtctgagaatgaacgagactctgatggctctgcttctgaaactagactccgtccctggttta  4076700                                            <---------TOE1(2)       <------ZmHOX2a(2)                <------ZmHOX2a(2)       =======================HOX2a_HOX2a <---------SPL7 --------->TOE1(2)                     --------->ARR11(3) ----------->HVH21                  --------->SPL7 =============================HOX2a_HOX2a------>ZmHOX2a(2) -------->DEAR3(2)                 <---------MYB52(1) ----->ZmHOX2a(2)                 <---------RAP2.6(3) <------ZmHOX2a(1) -----ZmHOX2a(2)        ---------->DOF2<---------ARR11(3) ------->CCA1(2)       ========================HOX2a_HOX2a =============================HOX2a_HOX2a====================HOX2a_HOX2a -------ARR14(2)       =========================HOX2a_HOX2a                           --------->ANAC58 ------>AGP1   --------->ZAT2    ----------->GT1     --------->ANAC58                 --------->ANAC58 ------>ARR14(2)       <------ZmHOX2a(1)=====================HOX2a_HOX2a         ---------->DOF2 ------>ARR10 --------->GLK1(2)--------->At4g35610   --------->ANAC58   <---------LBD16   gatccgacgatcagagaagctcggaggaaagtgagccgtaagatcgtagggatgcaggaaatactcgattcaatctcggagactaaagacgaaattcaat  4076800  Previous    Next  AGI:  At1g12050.1    Description:  fumarylacetoacetase, putative. similar to hypothetical protein [Vitis vinifera] (GB:CAN77935.1); similar to unknown [Populus trichocarpa] (GB:ABK92546.1); similar to Fumarylacetoacetase [Medicago truncatula] (GB:ABD33010.1); contains InterPro domain Fumarylacetoacetase, N-terminal; (InterPro:IPR015377); contains InterPro domain Fumarylacetoacetase, C-terminal-related; (InterPro:IPR011234); contains InterPro domain Fumarylacetoacetase; (InterPro:IPR005959); contains InterPro domain Fumarylacetoacetase, C-terminal-like; (InterPro:IPR002529) Range:  from: 4072750    to: 4076205    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g12060.1    Description:  ATBAG5 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 5); protein binding. similar to BAG6 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6), calmodulin binding / protein binding [Arabidopsis thaliana] (TAIR:AT2G46240.1); similar to unknown [Populus trichocarpa] (GB:ABK92951.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048); contains InterPro domain Apoptosis regulator Bcl-2 protein, BAG; (InterPro:IPR003103) Range:  from: 4076332    to: 4077022    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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