Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ------>MYB83                                             <---------------AtSPL8                                        ---------->DOF2--------->MYB46(3)                                   --------------->AGL15                                   <---------------AGL15                                  --------->MYB46(3) ------>MYB46(1)--------->MYB46(3)                                  ----------------->AGL3           -------->P ----------->RAV1(1)              <---------ATHB12 <---------MYB46(2) ------>MYB46(1)                 ------>MYB83<---------------AtSPL3------>MYB46(1) ------>MYB83                    ------>MYB46(1)<-----------GT1  ------->GAMYB ----->GAMYB                     -------->Pxxxxxxxxxxxxxxxx>smallRNA(s) ------->MYB46(3)      <---------ARR14(2)<---------TOE2(3)      --------->MYB46(3) ------>ANAC46         --------->ARR14(2)<---------TOE1(3)    <-----------GT1    ------>MYB46(1) ->ANAC46         --------->MYB52(1)   <---------AHL20(2)  --------->TOE2(3) >>>>>>>>>MYB2   -------- >At4g35610   --------->TOE2(3)--------->DEAR3(1)  <---------MYB59 ------>MYB83  ------>MYB83--------   acccaacaaaactaaatctcaaacggatttgagccaaccatttaaagtttgtaccgaacaaacttaaccaacctctgaaaaccaactacatacaattgta  4065900                                                                                          --------->LBD16                                                                         --------->DAG2   ------>NtERF2                                                                  --------->ANAC58       --------->ANAC46                                                                  --------->ANAC46       --------->LBD16                                                                  --------->ANAC58       <---------DEAR3(1)                                                             ----------->ARR10 <---------O2<------NtERF2                                     <---------ANAC58     <---------ANAC58     <---------ANAC58                                   <-----------GT1        <---------ANAC55(2)  <---------ANAC46                               <---------YAB1             <---------ANAC58  ----------->TGA1     ----                         --------->ICU4                   <---------ANAC55(1)  <---------ANAC58  <---  --------->TOE1(2)      <---------YAB1           --------->TOE2(3)     ---------->DOF2 <---------LBD16 --->GT1              <---------ZAT6 <---------ANAC58     --------->ANAC55(2)  <---------bZIP60(2) ->YAB1 ------->TEIL  ----------->GT1----------->RAV1(2)  <---------ANAC46  ----------->HVH21  ------   atttcatacgaacatagagtaatagagataattgttattacctgcatcaaaacctttgttacgtagataagccataaagtgacgtttctccccggcgaag  4066000                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                       ----------->HVH21                                                                      --------->LBD16                                                                     --------->ANAC55(2)                                                                     --------->ANAC46                                                                     --------->ANAC58                                                                     <---------ANAC55(2)                                                                --------->HSFB2a(1)                                     ------>NtERF2--------->LBD16    --------->ANAC58                                     <---------At4g35610       --------->GLK1(2)                                  <---------At4g35610          --------->ARR14(2)           <-----------GT1<---------ICU4         <---------ANAC46    --------->ANAC55(1) ----->ARR14(2)          <---------MYB52(1)   --------->DEAR3(1)<---------HSFB2a(1) ------ARR14(2)------>NtERF2      ------>NtERF2------>NtERF2   <-----------ARR10 <-----------HVH21 ----->ARR10<---------At5g28300  <-----------RAV1(1)          <---------GLK1(2)  ------>ZmHOX2a(1) --   acccgactagcatttaccgcctcatccattattctctgccgctcttcgcctccgtggttttcaagaatctcccgtaacctctccttcacatcttcgtaat  4066100                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                           <---------                                                                                           <---------ARR11(3)                                                                                           --------->ARR14(2)                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                  <---------ARR11(3)                                                                          <-------TEIL ---------->DOF2                                                                         --------->ARR14(1)<---------ARR14(2)                                       <-----------RAV1(2)               --------->CCA1(2) --------->ARR14(3)                               --------->ANAC58                         <---------GLK1(2)----------->ARR10                               --------->ANAC58         <---------ZAT14 --------->ARR11(1) --------->ARR11(3)                             ---------->DOF2     <-----------GT1        <---------ARR14(2) --------->AGP1            --------->YAB1------>ZmHOX2a(1)  --------->DAG2    <---------ETT(2)   --------->ARR14(2)          <-----------GT1 --------->LBD16   ---------->DOF2    --------->ETT(2)   <---------ARR14(2)< ---->ZmHOX2a(1)    <<<<<<<<<TBF1     ------>ZmHOX2a(1) --------->ZAT14 --------->ARR14(2) <---------ARR14(3)   cctcatccgatttatcatcttcttcttcctgaaaagcatcctcaggtaaagtttccacttctctgtcgataaaagattcgaccagatcccaaagatcttc  4066200                                                             <---------ATERF1(1)                                                             ------>NtERF2                                                             --------->ABI4(1)                                                            --------->RAP2.3(2)                                                            --------->ATERF1(2)                                                            --------->ANAC46                                                            <---------ATERF1(2)                                                            --------->DEAR3(1)                                                            --------->ANAC58                                                            --------->ANAC58                                                            --------->RAP2.6(2)                                                            --------->RRTF1(3)                                                            --------->RAP2.3(3)                                                            --------->RRTF1(2)                                                            --------->DREB2C(2)                                                           --------->DEAR4(2)                                                           --------->RRTF1(1)                                                           --------->ATERF1(1)                                                           <------NtERF2                                                           --------->RAP2.6(1)                                                           --------->ORA47(2)                                                           --------->RAP2.3(1)                                                           --------->ERF1                                                          <---------At4g35610                                                          --------->At4g35610                                                          <---------RAP2.3(1)                                                          ------>NtERF2                                                          --------->ABI4(1)                                                          <---------ATERF1(1)                                                          <---------DREB2C(1)                                                          <---------DEAR4(2)                                                         <---------ALFIN1                                                         --------->RAP2.3(3)                                                         --------->RRTF1(3)                                                         --------->DEAR3(1)                                                         <---------DEAR3(1)                                                         <---------ATERF1(2)                                                         --------->RRTF1(2)                                                         --------->ATERF1(2)                                                        --------->ATERF1(1)                                                        --------->RAP2.6(1)                                                        <------NtERF2                                                        --------->ORA47(2)                                                        --------->RRTF1(1)                                                        --------->RAP2.3(1)                                                        --------->DEAR3(2)                                                        --------->ERF1                                                      --------->ANAC46                                                     <-------PIF4                                                     <-------MYC3                                                     ------->PIF4                <----------DOF2                                                     ------->MYC3              <---------At4g35610                                                     ------->PIF5              ------>NtERF2                                                     <---------ABI4(2)        --------->RAP2.3(2)                                                     <-------MYC2            --------->ATERF1(1)                                                 --------->ZAT18             --------->DEAR4(2)                                                 --------->ZAT14             <------NtERF2                                       --------->ANAC58 --------->DEAR4(2)   --------->RAP2.3(1)                                       --------->ANAC46<---------ATERF1(1)  <---------RAP2.3(1)                                      --------->SPL7 <-------PIF5           <---------DEAR4(2)                                    <---------SPL7<------------OsbHLH66     <---------ATERF1(1)                                    <---------ZAT18  ------->MYC2          --------->RAP2.6(2)                                    --------->ZAT14 --------->ANAC58       --------->DEAR3(1)                                    --------->ZAT18 --------->ANAC58       <---------DEAR3(1)                                 <------------------SPL14--------->RAP2.3(2)------>NtERF2                              <---------At4g35610<---------ZAT18           --------->RAP2.3(2)                           --------->At4g35610   <---------ZAT14 --------->bZIP60(2)                           <---------At4g35610  --------->ALFIN1 --------->REM1(1)                           <---------ZAT2     <---------ANAC58 <---------ALFIN1--------->At4g35610                           --------->ZAT2     <---------ANAC58 ----------->RAV1(1)       --------->LBD16  --------->At4g35610   <---------ANAC46<------NtERF2--------->ANAC46     <---------LBD16    <---------At4g35610<---------DEAR3(1)<-----------HVH21--------->DEAR3(1) --ARR10                --------->LBD16--------->ANAC58------>NtERF2      --------->RAP2.3(1)      -- -----------HVH21------>ZmHOX2a(2)  <---------ZAT14 --------->ANAC46  ---------->DOF2 <---------YAB1   tgtgtcatccggagagtgatcgcttccgctgctgctagcgcacggagggcgtgcacgcgccgccgccacatcaaaagccgccgctgttctgataaatcgt  4066300                                                                                          <---------ZAT6                                                                                   <---------YAB1                                                                                  --------->AHL20(1)                                                              <-----------TBP     <---------AHL20(1)                                                            <-----------TBP       <---------AHL20(2)                                                   <---------ANAC58              --------->YAB1                                <---------GLK1(1)  <---------ANAC58              <---------AHL20(2)                              --------->ATHB12     <---------ANAC46              --------->AHL20(2)               <---------AHL20(2)               ----------->HVH21             <---------ICU4     --------->ZAT6        <---------ANAC58    <-----------HVH21              --------->YAB1  ------>ZmHOX2a(1)        <---------ANAC58    --------->At5g28300           --------->ICU4  <---------CCA1(2)    <---------DAG2       <---------HSFB2a(2)              <---------AHL20(2) ---->ZmHOX2a(1)       <----------DOF2 *TSS --------->HSFB2a(2)              --------->AHL20(2)     <   cctcctatctctaccattttatgcccttttcttgatttctcatcttctcggtgacttgtgggatatatatacacgagtattaattatatttagtgatatg  4066400                                                                                          <----------DOF2                                                                                         <---------ANAC46                                                                                       ------->GAMYB                               <---------LBD16                                      --------->MYB52(1)         --------->ETT(2)    ----------->HVH21   ----------->GT1                    <-----------GT1--      <---------YAB1     <---------DAG2  <----------ID1                     ---------->DOF2   <------ --------->YAB1          <----------DOF2 --------->ANAC46             ----------->GT1<---------At5g28300 ---------YAB1     <----------DOF2     <---------DOF5.7(2)        <---------YAB1<------ZmHOX2a(1) ---   ttttcattatgttgacagagactttgactttttgacggagtaaacgacaaaatgtaaaatatgacaacatgatggtgaaaaaggattaacggcgttttgt  4066500                                                          <---------AHL20(2)                                                         --------->AHL20(2)                                                      <------NtERF2                                                    <---------ANAC46                                            <---------GLK1(1)                                            --------->GLK1(1)                                           --------->ARR14(2)                                <---------At5g28300 <---------ANAC58                           <---------AHL20(2)      <------NtERF2             ---------->DOF2   <-----------GT1     <---------LBD16          --------->TOE2(3)--------->AHL20(2)     ------>NtERF2       --------->GLK1(1)  <---------AHL20(2)<----------TaMYB80  ------->GAMYB           --------->AHL20(2)--------->CCA1(2) <---------ANAC46      --------->AHL20(2)  ---------->TaMYB80                   --------->MYB46(3)<-- ------->MYB52(1)    <---------MYB52(1)    <---------ARR14(2)                 <-----------GT1    ---- ---ANAC46--------->TOE1(3)--------->AHL20(1) <-----------RAV1(1) <---------GLK1(2)             ----- -------->HVH21    ----------->GT1   <----------DOF2<---------ANAC58       <---------ICU4       <----   gtaacggagaaaccctaaatcccgttaaattaattacagctttgggatatgctggcggattaattttagattctcaattgttaccaccatattgtccaga  4066600                                         --------->MYB59                                     <---------ICU4                                    --------->AHL20(2)                                             <-                                    <---------ATHB51                <---------YAB1        --------->YAB1      <----------DOF2               <---------AHL20(2)         <---------AHL20(2)        <---------AHL20(2)      --------------->AGL15         --------->ICU4            --------->AHL20(2)        --------->AHL20(2) -----TEIL ---------->DOF2         <---------AHL20(1)         <---------AHL20(2)     <---------RVE1(1) ----->CCA1(2)                  <---------AHL20(2)            <---------AHL20(1)    <---------GLK1(2) ---->ARR14(2)                  --------->AHL20(2)         --------->WOX13(1)   <-------TEIL <------- -----ARR14(2) <------ZmHOX2a(1)--------->AHL20(1) <---------ZAT6  <-----------GT1  --------->ARR11(3)   tacattcacttttaaaaggattatatcagaaaaataaaataattaggcatttagtgttagtcaattaattttcatttttagattcagatttttaataaca  4066700                                                --------->AHL20(2)                                              --------->TOE2(3)                                        ------>NtERF2                                       --------->ANAC46                                       --------->ANAC58          ----------->HVH21                                       --------->RAP2.6(2)      --------->LBD16                                       --------->ANAC58        --------->ANAC55(2)                                      --------->SPL7           <---------ANAC58                                    ------->GAMYB              <---------ANAC58          ------------                         --------->GLK1(2) ----------->RAV1(1)<-------TEIL               <-----------              <---------AHL20(2)    <---------SPL7     <---------MYB46(2)               -------------         <---------AHL20(2)        --------->MYB46(3)  <---------MYB52(2)             --------->ARR14(2)         <---------AHL20(1)      --------->MYB52(1)    --------->MYB46(3)    --------->TOE1(3) ---------DOF2<-----------GT1  <---------WOX13(1)    <-----------GT1 ---------->DOF2  <---------ARR14(2) ----GT1 --------->AHL20(2) <---------YAB1 ------>NtERF2 --------->MYB52(1)  --------->TOE2(3)  -----   cctttgtatattttatttacttcaaaaattctgattaacggacgccaacatttattaactaacgtccgtgacaaagtatccataaccagttccagttgga  4066800  Previous    Next  AGI:  At1g12030.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62420.1); similar to Protein of unknown function DUF506, plant [Medicago truncatula] (GB:ABN05810.1); contains InterPro domain Protein of unknown function DUF506, plant (InterPro:IPR006502) Range:  from: 4064665    to: 4066339    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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