Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ------->GAMYB         --------->GLK1(2)      <---------At4g35610    <---------GLK1(2)                 --------->STY1(2)      --------->At4g35610    --------->ARR14(2)                <---------STY1(2)  <-----------GT1         --------->ANAC58                    --------->ANAC58 ------->ARR14(2)         --------->ANAC58                <<<<<<<ZML2                               < ---->ANAC58         --------->ZAT18              ---------->DOF2                            <------- ---->ANAC58         <---------ZAT18         --------->LBD16  --------->ANAC58        ----------->HVH21   gaattcacaactgactcaccgagtcgactcggaatctctgagtcatccgtactaaagctagaactagcaagaagtgaagaagacttccctgaacgctttc  4062900                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    =                                                                                                 ----                                                                                                 ----                                                                                          <---------RAP2.6(3)                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)             --------->ANAC46                                                          ------>NtERF2<            --------->ZAT6                             --------------------->WRI1      --------->At4g35610       <---------ANAC58                         --------->ANAC46                    --------->ZAT2  <       <---------ANAC58                         --------->ANAC58                    --------->At4g35610    <----------DOF2         <---------ANAC58    --------->ANAC58             <---------YAB1     <---- ---------CCA1(2)           <---------ANAC58<---------HSFB2a(2)       --------->ATHB12 <---------ATERF1(1) ---DOF2  -------->P   <----------DOF2      --------->HSFB2a(2)  <------NtERF2      <---------At4g35610   ttctatctttcttaccagtaacgttctttttcttgttcttgttcttctccaagctatcttcgaaggcatcgatgatttcatgaataagctgccgactcgg  4063000          <---------MYB52(2) ---------bZIP60(2) ---------ANAC58                             <---------At5g28300 ---------ANAC58                          <-----------HVH21                --------->DAG2 ==============================================bZIP_DOF            <---------WOX13(1)          <----- ------->HVH21                      ---------->DOF2              --------->ATHB12            <------- ------->TGA1                    --------->At4g35610        <---------ANAC46          <-----------RAV1(1) ---------TGA1a                  <---------At4g35610        <---------ANAC58          =============== ---------O2                  <---------At4g35610    ---------->DOF2      ---------->DOF2<---------ZAT18 -------HVH21             <---------REM1(1)----------->HVH21<---------ANAC58     <----------DOF2   tgacgagtcccatctaacccagtaactcgtgtagcagctaaagcagtcacagtggaaaagaggcgagtgattgtcgaaaagggcttttttgtgggctttg  4063100                                                                                                 <---                                            <---------MYB46(3)                                 ------                                            ----------->GT1                                    ------                                           <---------RAP2.6(2)                              ------->GAMYB                                          <-------TEIL                                      ---------                                       --------->At4g35610                                 --------->MYB46(3)                  <------MYB46(1)      <---------At4g35610                               <---------ARR14(2)                  <------MYB83        ----------->ARR10                           <-----------HVH21     <-----------RAV1(2)         <------NtERF2<--------P                         --------->LBD16----- ----AtMYB61    --------->ALFIN1--------->LBD16          --------->CCA1(2)     <---------LBD16------- ---DOF2        <--------P     --------->DEAR3(1) --------->CCA1(2)          <---------SPL7--------->DEAR3(2) ================RAV          <---------LBD16<-------GAMYB            --------->MYB52(1) --------->ARR14(2)   gtcttattcaggcgagaggtagggtttcgctcgccggagtaagatgcggttgatatgagataggctaaaacttcacggtcttccggtgagagaaccgccg  4063200                                                                    --------->ALFIN1                                                                 <---------MYB46(3)                                                                ==========================bZIP_DOF                                                                --------->O2                                                                <---------ANAC46                                                                <---------O2                                                                <---------TGA1a                                                                --------->TGA1a                                                               <------NtERF2                                                               --------->ATERF1(1)                                                              <---------ATERF1(1)                                                              ------>NtERF2                                                             <---------DEAR3(1)                                                             --------->DEAR3(1)                                                             ----------->HVH21                                                            --------->RAP2.3(1)                                                            <------NtERF2                                                            --------->ATERF1(1)                                                           <---------RAP2.3(1)                                                           <---------RAP2.6(1)                                                           <---------RRTF1(1)                                                           <---------DEAR4(2)                                                           <---------ORA47(2)                                                           <---------ERF1                                                          <---------ANAC46                                                          <---------RAP2.3(3)                                                          --------->ATERF1(2)                                                          <---------ATERF1(2)                                                          <---------DEAR3(1)                                                          --------->DEAR3(1)                                                          <---------RAP2.3(2)                                                         <---------ABI4(1)                                                        <---------ATERF1(1)                                                        <---------RAP2.6(1)                                                        <---------RRTF1(1)                                                        ------>NtERF2<---------SPL7                                                        <---------RAP2.3(1)                                                       <---------DEAR3(1)                                                       <---------RRTF1(2)                                                <---------AHL20(2) <---------------AtSPL3                                          <---------TOE1(2)<---------ATERF1(1)                                         <---------MYB52(1)------>NtERF2                                        <-------GAMYB  <---------RAP2.3(2) <---------ZAT6                        <---------MYB46(3)------>NtERF2 ------MYB52(1)                        --------->MYB52(2)<------NtERF2 --->RAP2.3(2)                         --------->MYB55(2)--------->ATERF1(1)   <----------DOF2 --->DEAR3(1)                       <---------MYB46(3)--------->At4g35610  --------->ARR14(2) >DEAR3(1)                         <---------AtMYB61  <---------LBD16<---------ZAT14 ->NtERF2                ----------->GT1==================================MYC_MYB -->RAP2.3(1)  <---------ANAC46    --------->ALFIN1  <-----------RAV1(1)   <---------ARR14(2)   ctagtgagaaaatagcgacgggaagaagagtaagaaggtggtcgttggattttatctgcggcggcgacgggtgtacggttccttttctgtagagcttctt  4063300                                                                              <------MYB83                                                                              <------MYB46(1)                                                                             <---------TOE2(3)                                                         ----------->TBP--------->AHL20(2)                                          <---------ARR11(3)      ---------->DOF2                                   *TSS   --------->ARR11(3)  --------->MYB52(1)                                 --------->HSFB2a(2)     --------->AHL20(2)  --------->MYB59                                 <---------HSFB2a(2)   <----------DOF2  <---------AHL20(2)      <----   catattttctatggaagagagagagagagagacttgtggaagaagatgttatcgagactttaaataccgaaagttttattaggttttgtttgttttggta  4063400                                            --------->TOE2(3)                                    ------>NtERF2                                   ------->GAMYB   <---------AHL20(2)                                   --------->DREB2C(2)                          --------->ATHB12                                   --------->DEAR3(1)                          <---------ATHB12                                  --------->MYB46(3)                         --------->YAB1     <<<<<          <------------CBF        --------->ORA47(2)                   --------->ANAC58    <--------- --------CBF                     <---------At5g28300                   --------->ANAC58 <---------ALFIN1   ttgttttttagttattgtctctcgtcttaaaaatccaccgcctaaacctttgtttaatggcaaaactaggtttaagcaaaaatcattcgaccactttggt  4063500                                                                             ----------->HVH21                                                                         <---------RAP2.6(2)                                                                         <---------DEAR3(1)                                                                        --------->RAP2.6(3)                                                                  --------->ZAT2                                      --------->AHL20(2)          <---------At4g35610                                --------->TOE2(3)            --------->WOX13(1)                                ----------->GT1             <---------AHL20(2)                               ----------->GT1    <---------AtLEC2--------->At4g35610                   --------->DAG2     <---------AHL20(2)   <---------ATHB12<---------At4g35610 <<<<MYB2         ---------->DOF2     <---------AHL20(1) --------->WOX13(1)--------->At4g35610 -DOF2   ----------->GT1----------->GT1      <----------DOF2--------->AHL20(2)  <---------ANAC46   tttcatcaaattggttaaaaaaaagtcagtaaaatgttaaaaaatttcttttgtatgaccaattaatcagcttagacggctgacttatatatgaaattaa  4063600     --------->ATHB12                         <---------AHL20(2)    <---------YAB1                   <---------YAB1        --------->AHL20(2)   <----------DOF2           <-----------GT1 --------->AHL20(2)  --------->YAB1        <---------YAB1--------->YAB1    --------->YAB1        --------->TOE2(3)   gctatctttattgactaaacaatgttccgattaactcttatcaaaaattttataacattgattatatatgaataaactaaacttaatacattgaattcca  4063700                                                                    <---------ANAC46                                                                    <---------ANAC58                                                                    <---------ANAC58                                                              --------->ATHB12                                                              <---------ICU4                                                              --------->ATHB51                                                              <---------AHL20(2)                                                              --------->AHL20(2)                                                             --------->ICU4                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                          --------->AHL20(1)                                                      --------->AHL20(2)                                                      <---------AHL20(2)                          ---------->DOF2            --------->AHL20(1)                         --------->AHL20(2)          <---------AHL20(1)                         <---------AHL20(2)          --------->AHL20(2)                    <-------TEIL                     <---------AHL20(2)               <------ZmHOX2a(1)           --------->YAB1--------->AHL20(2)                 <--------   ctacaaaattcaatgtaggaaatacatttaaagaaaacagaccaaaaatactaaataaaattaattatttgtgtgtttgtaagactgtttgtgttttatt  4063800  Previous    Next  AGI:  At1g12020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62422.1); similar to unknown [Brassica rapa] (GB:ABL97977.1) Range:  from: 4062460    to: 4063335    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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