Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ANAC46          <---------At4g35610                             <---------YAB1    ------>ZmHOX2a(2)                   ------->TEIL   ---                           ----------->GT1<---------WOX13(1)            <----------DOF2          ----                   ----------->GT1   --------->ETT(2) <-----------GT1  <---------DAG2    <---------ATHB12   caaaaatccaaaatcagtatattgtaatattgttatttgtcgagattgatcgtatattacacatcatccctagcctttttttttgcatctaatgactcca  4055800                                              --------->TOE2(3)                                            ------->TEIL                                         --------->ANAC58   <---------YAB1          --------->At4g35610            --------->ANAC58 --------->AHL20(2)       <---------At4g35610              --------------->AtSPL8       --------->At4g35610          <---------------AtSPL8--------->ATHB51      ----------->RAV1(1)           <---------------AtSPL3-------->ATHB1     <-----------RAV1(2)           <---------ANAC46      --------->ICU4   ----------->RAV1(1)             <---------ANAC58      <---------ATHB51           ---------->DOF2 ------->DOF2                      <---------ANAC58      <---------YAB1        --------->DAG2 ----->ANAC46                  <----------DOF2--------->TOE1(3)              ---------->DOF2  -------   caaagcaccagcagataaaaaaactcttcgagtctttacttgtacgaaccttataaacaattattcatgtttttttttaaaaaggcaaaagaaataacca  4055900                                                                                             --------                                                                                        <---------ZAT18                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(1)                                          <-----------GT1                        <---------AHL20(1)                                         <-----------GT1                        --------->AHL20(2)                                        <---------AHL20(2)                 --------->LBD16   --------                                       --------->AHL20(2)          --------->MYB59    <---------ZAT18                   <-------TEIL     ------>MYB83            <------ZmHOX2a(1)   --------->YAB1                  --------->CCA1(2) ------>MYB46(1)      <-----------RAV1(2)   <---------ATHB12 -->MYB46(3)   <---------ZAT6  <----------ID1        ---------->DOF2      --------->ANAC46   --------   atagaattgtagaactagagatacaaatggaaaacaccaaattttatcccatctcaaaagcaggagagtaaggtccccccaattatattgcacacacaca  4056000                                              <---------------AGL15                                            --------->AHL20(2)                         ------>ZmHOX2a(2)                                           <---------ICU4                            <---------ARR11(3)                                          --------->ICU4                             --------->ARR11(3)                                        --------->AHL20(2)                       --------->ANAC55(2)                                       <---------AHL20(2)                        <---------ANAC55(2)                                     --------->YAB1                            --------->YAB1 ->ANAC58              <----------DOF2 --------->AHL20(2)                     <---------ATHB51      - ->ANAC46        <----------DOF2   >>>>>>>>>>GT-3b        --------->ICU4      <---------ATHB12     <- ->ANAC58--------->LBD16       --------->YAB1 --------------->AGL15       <---------MYB59  <---------YAB1   aatacaacttccccaaactctttttctttctaataagaaaaataatttttatatttagcaactattatctaaatgacccaattatgtgatcttatgactc  4056100                                                                      --------->AHL20(2)                                                                      ----------->TBP                                                                    <---------------AGL15                                    ---------->DOF2                <-----------------AGL3                                  <---------AHL20(2)               ----------------->AGL3                              --------->AHL20(2)                 ------>NtERF2    --------->ANAC55(2)       <---------AHL20(2)          <---------AHL20(2)    <---------ANAC55(2)      <---------AHL20(2)          <---------YAB1 -------->YAB1            --------->AHL20(2)          <---------AHL20(2)    --------->STY1(2) --------YAB1             <---------AHL20(2)          --------->AHL20(2)    <---------STY1(2) -------   tatgatacttatctatcgttttacttaaaaaattatttaaaagacttaacatttgttttattatttgcgcctataaatagctagcgaccctctctcaacc  4056200                                                                                         ------------                                                                                         <-----------                             ------>ZmHOX2a(2)                                           ------------                --------->YAB1      --------->TOE2(3)                         ------->TEIL-----------              <XXXXXXXXXXXXXXXXXXXXMIR172E                               --------->At4g35610       <---------ALFIN1 <---------TOE2(3)   <---------STY1(2)            <---------At4g35610 ->P *TSS     <XXXXXXXXXXXXXXXXXXXXMIR172A/B--------->STY1(2)      --------->CCA1(2)<---------TOE2(3)   ccttaactcacacatttagcatcatcaaggatcgaaaacattaagtagctagttaagagagagagagagagatggagatgaacattaagtttccagttat  4056300                                                                                         ---------->ID1                                          <----------DOF2                            <---------ANAC58                                         <---------ANAC58                            <---------ANAC58         --------->At4g35610             <---------ANAC46                           <-------TEIL         <---------At4g35610             <---------ANAC58                          --------->ARR14(2) ----->AGL3                      ------>MYB83           <---------ANAC58           <---------ARR14(2) ------AGL2                      ------>MYB46(1)        <---------ANAC58           --------->ARR11(3) ----->AGL2                    <---------MYB59        <---------YAB1     <----------DOF2 <---------CCA1(2) ---->AGL15     --------->YAB1 --------->AtMYB61------>ZmHOX2a(2)  --------->ALFIN1--------->GLK1(2)   agacttgtctaagctcaatggtgaagagagagaccaaaccatggctttgatcgacgatgcttgtcaaaactggggcttcttcgaggttcttgtctctctt  4056400                                                                                                 <---                                                                                            ---------                                                                                            <--------                 --------->LBD16       --------->ARR11(3)                                  --------->AHL20(2)               <---------LBD16         <---------ARR11(3)                                  <---------AHL20(1)              <---------YAB1   <----------DOF2                                         --------->YAB1       <---------WOX13(1)    <-------TEIL                 <-------TEIL           --------->YAB1 <----     --------->ATHB12    <---------TOE2(3)           --------->YAB1     <---------AHL20(2) <---------AHL20(2)    <---------YAB1       --------->MYB59  --------->GLK1(2)           <---------YAB1--------->YAB1   ctcttgctgattgattatcagggaatttaggttctttcttagatattctttggtatcatatacataaaacctattattttgaaaaataatcaaattattt  4056500                                <---------YAB1                  --------->LBD16                        <---------MYB46(3)                 --------------->AGL15                 --------->ZAT2                 <---------------AGL15                 <---------ZAT2                <-----------------AGL1                 ----------->RAV1(2)                  ---------        <---------AHL20(2)------->TEIL                 --------->At4g35610           --------->MYB52(1) --------GT1    ----------------->AGL2                 <---------At4g35610         ================== >AHL20(2)      ----------------->AG                 <-----------RAV1(2)           ------>ZmHOX2a(2) -AHL20(2)      ----------------->AGL1         <---------MYB52(1)                --------->ARR11(3) -------GT1     <-----------------AGL2       ----------->GT1                     <---------ARR11(3)   tcccttacattttttttttccgaaaatggacgttacaattcaaagtttcgttatttcagctggtgaaccatggactaccatatgatctaatggacaacat  4056600                       --------->ANAC46         ---------->DOF2   <------ZmHOX2a(1)   --------->ANAC58                                                           --- -->RAV1(1)     --------->ZAT6                                                    --------->HSFB2a(2) =========HOX2a_HOX2a  --------->ANAC58---------->DOF2                     <---------GLK1(1)      <--   tgagaggatgacaaaggaacactacaagaaacatatggaacaaaagttcaaagaaatgcttcgttccaaaggtttagataccctcgagaccgaagttgaa  4056700  Previous    Next  AGI:  At1g12010.1    Description:  1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative. similar to ACO2 (ACC OXIDASE 2) [Arabidopsis thaliana] (TAIR:AT1G62380.1); similar to ACC oxidase [Brassica oleracea] (GB:CAA57285.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 4056205    to: 4057931    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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