Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->DAG2                                           ---------->DOF2                                       <------ZmHOX2a(1)                               --------->ANAC55(1)                 <---------ARR11(3)        --------                               --------->ANAC55(2)                 --------->ARR11(3)     --------->ATHB12       --------->At4g35610     --------->ANAC46             --------->At4g35610   <---------DAG2       <---------At4g35610     <---------ANAC55(2)       <------ZmHOX2a(1)        <----------DOF2 --------DEAR3(2)              --------->ANAC58      <---------TOE2(1)         <-----------GT1 -------DREB2C(2)              --------->ANAC58      <---------TOE1(1)<---------DAG2    <---------TOE2(3) ------RAV1(1)                <---------LBD16      <------ZmHOX2a(1)  <----------DOF2 <---------AHL20(2)   tcggtttttagctgtggaaaacgctgaaaaaacacggaataggaataaagtgaggacgaggaagatgaagaacttttttttttactttttaatgtttgac  4044000                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                    <---------DEAR3(1)                                                                 <------MYB46(1)                                                                <---------AtMYB61                                                             ==============================bZIP_DOF                                                             <---------bZIP60(2)                                                             <---------ANAC58                                                             <---------ANAC58                                                <---------TOE2(3)<------MYB83                                                --------->DAG2 <---------MYB52(1)               <---------AHL20(2)  <---------ANAC46          --------->O2         <---------AHL20(2)        ----------->GT1           <---------O2 --------->ARR14(2)       <---------RVE1(1)           <---------ANAC58          <---------ANAC46       <---------CCA1(1)           <---------ANAC58       ----------->TGA1<---------ARR14(2)      <---------GLK1(2)           <---------MYB46(3)      ----------->HVH21      <---------ARR11(3) <----------DOF2      ---------->DOF2<---------TGA1a                 <-------      --------->ARR11(3) ==============================================bZIP_DOF     ---------->ID1<--    ----------->ARR10 ---------->ID1          =========================bZIP_DOF <----------DOF2   <-- --->HVH21    <---------AHL20(2)  --------->MYB55(2)  <---------ANAC46 <---------ANAC46 <-----------RAV1(1)   aatggaaagatttttttttattttgttctttagcattgggtgaatagaaaaaggttgagggtgacgttggtctgcgtatagtctttgtctctgtggctcc  4044100                                                                                <---------ATHB12                                                                              --------->WOX13(1)                                                                            ------------>CBF                        --------->ATHB12               ------->MYC3--------->ZAT14 --PCF2                --------->ICU4      <---------ZAT14         <---------ZAT14 --------DOF2    --------->ATHB12    --------->DOF5.7(2)         --------------->AtSPL8        ------ -------DAG2  --------->TOE2(3)---------->DOF2         <-------MYC3<---------SPL7 ----------->GT1   -   ctttttctagttgaatccttgattactgattagtaaagcgtttacttcacttaaacacatgtcttatgctgtactgtattcaatcagtgaatatgagaat  4044200                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                      <---------AHL20(1)                                                                                      --------->AHL20(2)                                                                                   --------->YAB1                                                                                  --------->ICU4                                                                                  <---------YAB1                                                                                 <---------AHL20(1)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                               <---------YAB1                                                                             --------->ATHB51                                                                             -------->HAHB4                                                                             <--------HAHB4                                                                             -------->ATHB1                                                                             <---------ICU4                                                                             <---------AHL20(2)                                    <------ZmHOX2a(2)                        --------->YAB1                                   <-----------ARR10                        <---------YAB1                                   --------->ARR11(3)                       <---------ATHB51                                   --------->ARR14(2)                    <---------AHL20(2)                                   <---------ARR14(2)                  --------->ANAC55(2)       <---                                   <---------ARR11(3)           <------------CBF--------->YAB1 <-----                                  <------ZmHOX2a(1)         --------->LBD16 --------->ICU4     ------                       --------->YAB1                --------->ARR11(3)<---------ANAC55(2)     <----- --->GLK1(2) ---------->DOF2    <---------TOE2(3)    <---------ARR11(3)----------->GT1<---------AHL20(2) --------->DOF2       ----------->GT1------>ZmHOX2a(2)  --------->GLK1(2)--------->AHL20(2)    ------   ttgaaaggaatgagtcaaagtgtaatgaaaatataaggatcttatgaagtaagaagataatccgtagattgttaagtaattattataattaatttagtgc  4044300                                               ----------->RAV1(1)                                            <---------ATERF1(1)                                            ------>NtERF2                                           --------->ATERF1(2)                                           <---------RAP2.6(2)                                          <---------ABI4(1)                                          --------->ATERF1(1)                                         <---------ATERF1(1)                                         <---------PCF2                                      --------->ALFIN1                                     ------->MYC3                                     ------->MYC4                                     ------->PIF5                                     <-------MYC2                                     ------->MYC2                          <---------TOE2(2)                                     <-------MYC3                         --------->ALFIN1                                     <-------PIF5                        <-------PIF5                                     <-------MYC4                        ------->MYC3                                    =======================RAV           ------->PIF5                                    --------->TGA1a                      <-------MYC4                                    --------->O2                         ------->MYC4                                    <---------O2                         ------->MYC2                                    ----------->RAV1(2)                  <-------MYC3                                    --------->PIF3(3)                    <-------MYC2                                    <---------ANAC46                    <---------ANAC46                                    <---------PIF3(3)                   <---------TGA1a                                <-----------HVH21                       --------->TGA1a                                ----------------->PIF3(1)               =============MYC_MYB                                ------>NtERF2<------NtERF2              <---------O2                             --------->At4g35610                        --------->PIF3(3)                             <---------At4g35610                        <---------PIF3(3)                             --------->ZAT2<---------ATERF1(2)          --------->O2                             <---------ZAT2<---------DEAR3(1)         <---------ALFIN1                         <---------At4g35610--------->RAP2.6(2)     <----------------PIF3(2)                         --------->At4g35610<---------RAP2.3(1) --------->ARR14(2)                         --------->ZAT2 <---------DEAR3(1)      <---------ARR14(2) ---------CBF      ===========================bZIP_DOF       <---------ANAC46                      -- ----ZAT14         ---------->DOF2  <---------TGA1a          <---------ANAC58                     <-- --->ZAT18       ------>ZmHOX2a(1)<---------ALFIN1           <---------ANAC55(2)                  --- ----ZAT18      --------->TOE2(3)---------------->PIF3(2)    --------->ANAC55(2)               ------ --->ZAT14     ------>ZmHOX2a(2)<----------------PIF3(2)     <---------ANAC58<-------GAMYB------>ZmHOX2a(2)   attggtattagatttgatcctaaaatcagctagctgccacgtggggcggcaacagtggaagtcgcgtatgtgccacgtgggttatgcattgatcgagctt  4044400            --------->ANAC58           --------->TOE2(3)            --------->ANAC58          --------->ANAC46           <---------LBD16            --------->ANAC58          --------->ANAC58            ----------->GT1          --------->ANAC58            --------->ANAC58      <-----------HVH21             <---------ALFIN1 ------->LBD16          <---------ANAC46                                                     -------- -------HSFB2a(2)       <---------ANAC58         --------->AHL20(2)              --------->ANAC58 ------>HSFB2a(2)       <---------ANAC58       --------->TOE2(3)                 --------->ANAC58 --->GLK1(2)--------->ANAC46      ------>NtERF2<----------DOF2             --------->At4g35610      <   ctggagaatgtcacgcgcaagttggagcgtgaatgccaccacgttaatactttaaattcacatgggaagcgggagattgctgaacgacagcgtttcaaag  4044500                <---------ZAT6         <---------WOX13(1)   --------->TOE2(3)                <---------TOE2(3)               ---------->DOF2   <------ZmHOX2a(1) -->DOF2 <---------ARR11(3)         <---------YAB1                <------ZmHOX2a(2) ----------->GT1 ---------CCA1(2)      --------->AHL20(2)   ------>ZmHOX2a(2)     ===========================HOX2a_HOX2a   tcaaatctcaatttcttagtgaaaaaaaaatcgacattgagattgatcccatggacaagattgaacagatcaaagaaggaatcgaagaggaaataggcat  4044600                  --------->DEAR3(1)               --------->DEAR3(1)               ------->GAMYB              --------->MYB46(3)     <---------ANAC46              --------->DEAR3(2) ------>MYB83                                              <---------ANAC58             <---------At5g28300 ------>MYB46(1)                                <------MYB83            <-----------GT1    ------->GAMYB                                    <------MYB46(1)       --------->ATHB12       --------->DEAR3(2)                          <---------TOE2(3)<---------ANAC58      <---------YAB1        <-----------GT1  ----------->GT1  --------->YAB1   <---------AtMYB61    <---------At4g35610 <---------YAB1       <---------ZAT6  <---------YAB1    --------->MYB59  <<<<<   tccttctgatgatttaaccgccgaacattataaccgactacgtggtagtgttattcatcgtttttgataatcgatcgaggtttggttctattgtcttggt  4044700                                                  <----------DOF2                                            <---------ICU4                      <-----------RAV1(1)   <-----------GT1     <---------AHL20(2)<-------GAMYB     --------->WOX13(1)               <----------DOF2    <------------------------ANAC81   --------->TOE2(3)            --------->GLK1(2)          <------ZmHOX2a(1) <<<<MYB2  <----------DOF2            --------->YAB1          --------->YAB1          <---------ZAT6   tttctatttttttcttttattcttctgttgtatttctcaatgttaatcactgcttttggttctatgaaaattctgacttttagacctagttttagaggag  4044800                                                     --------->ANAC58                                            <---------WOX13(1)                                         <---------AHL20(2)                --------->LBD16                                         --------->AHL20(2)            <---------ARR14(2)          <-                                        --------->AHL20(2)             --------->ARR14(2)          --                               <---------TOE2(3)     --------->ANAC58 <---------GLK1(1)           <--                    <---------TOE2(3)<------ZmHOX2a(1)           ----------->HVH21              -----   tttttgttttgtttgtatgttttatgttgaatttatgtaggatttaattgataagaagcaaattagtctgacaaatccgaaaattttggtattctcgtca  4044900  Previous    Next  AGI:  At1g11970.1    Description:  contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 4044368    to: 4044667    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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