Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->LBD16     <---------LBD16   -------->P --->NtERF2 ----->DEAR3(1)          --------->ANAC55(2)                          <---------AtLEC2 --NtERF2                <---------ANAC55(2)                        <---------YAB1           <------- >ANAC58         --------->YAB1                                  <---------MYB52(1)          <------- >ANAC58         <---------ICU4             <---------bZIP60(2) <-------GAMYB    --------->ANAC58 >ANAC46        <---------ATHB12       --------->YAB1          ------>ZmHOX2a(2) --------->ANAC46 >DEAR3(1)      --------->ICU4   <---------TOE1(2)     <-----------RAV1(1)       --------->ANAC58   cgacttacccggtttacaatcatggatacttatcccatgtataatgacatggctcacatgttggatcgttatgcatggtccataggcaatttccacttta  4024700                                                                   ------->MYC2                                                                   <-------PIF5                                                                   <-------MYC2                                                                   <-------MYC4                                                                   ------->PIF5                                                                   ------->MYC4                                                                   <-------MYC3                                                                   ------->MYC3                                                                   <-------PIF4                                                                  <---------ANAC55(2)                                                                  --------->TGA1a                                                                  <---------TGA1a                                                                  --------->ANAC55(2)                                                                  <---------bZIP60(2)                                                  --------->ZAT6  <---------ANAC46                                                ----------->RAV1(1)------->PIF4                                             --------->ANAC58     <---------ANAC58                                             --------->ANAC58     <---------O2                                             --------->ANAC46 <-----------HVH21              <<<<<<<<                       <---------At4g35610   --------->ANAC55(1)  <---------ANAC58  <---------ICU4              --------->YAB1    <---------ICU4 --------->ANAC46----------->HVH21    --------->YAB1 <---------ALFIN1  <---------REM1(1)      <---------MYB52(1) --------->bZIP60(2) --------->TOE2(3) --DAG2    --------->WOX13(1)  <---------YAB1<---------ANAC55(2)  --------->O2  ------>ZmHOX2a(2)   < ---DOF2 <---------ATHB12      --------->ICU4--------->ANAC55(2) ------------>OsbHLH66      <--------   gcccctcttccatcaatcgtcttgtagctgttcatgatgagctcgttacgcaacactatgaccatgtcacgtgcaaatgtgatccataatggtttagatt  4024800                                                                                            ---------                                                                                          --------->MYB46(3)                                                                                         ------>MYB83                                                                                         ------>MYB46(1)                                                                                         -------->P                     <---------ANAC58                                                   --------->MYB52(1)                     <---------ANAC46                                                   <---------ALFIN1                     <---------ANAC55(1)                                               <---------ALFIN1                    <---------LBD16                                                    <---------MYB55(2)                 <---------ZAT14                                                     --------->ANAC46         --------->ARR14(2)                                                         --------->ANAC46         <---------ARR11(1)                                                     <-----------GT1    <-         <---------ARR14(2)                                                   <-----------ARR10 <----         <-----------ARR10                                                    --------->ARR14(2)-----        <---------CCA1(2)                                                   --------->LBD16------->GAMYB      <---------ANAC58                                                     <---------ANAC55(2)  <----      <---------ANAC58                                              --------->ARR14(2) --------->MYB46(3)      <---------ANAC46--------->LBD16         ----------->HVH21     <---------ARR14(2)--------->MYB46(3) <RAP2.2<---------ARR14(1)                  <---------At4g35610--------->ANAC46--------->GLK1(1)----- ------ZmHOX2a(2)--------->ZAT14    <---------LBD16         --------->MYB46(3)<---------ARR14(2)<---- -TOE2(3)------->TEIL<---------ANAC58   <-----------HVH21 <-----------GT1  --------->ANAC55(2)-------   ggatcactgcgtatctcagtgttccgggtctagggttttcagggtcgtctgatgggtttgtaaccacgtagatcgacccgtatttccccccaaccgcaga  4024900                                          --------->ANAC58                                          --------->ANAC46                                          --------->ANAC58             <---------LBD16         <---------MYB52(1)             --------->LBD16        <-------GAMYB          -------->P               <---------MYB46(3)          --------->SPL7           <---------DEAR3(2)                   --------->GLK1(2)          ------>MYB46(1)       ------------>AtMYB77                 --------->ANAC58 >LBD16   ------>MYB83         ----------->HVH21                     --------->ANAC58 ----------GT1              <---------ZAT18                       <------NtERF2 -----ARR14(2)              <---------ZAT14                      ------>NtERF2 ---->ARR11(3)--------->ANAC58 --------->ANAC58                  --------->ANAC58 -----GLK1(2)--------->ZAT18--------->ZAT14                     <---------ATERF1(2)  <------MYB83 ---->ARR14(2)--------->ANAC58 --------->ANAC46   --------->YAB1--------->ATERF1(2)  <------MYB46(1) -----ARR11(3)--------->ANAC46 --------->ANAC58  <---------ATHB12--------->ANAC58   --------->MYB59 ---->ARR10  <---------ZAT18--------->ZAT18------>NtERF2     --------->ANAC46       --------->MYB46(2)   ttttccaaaccctaccgcgcaatcggctagtgcacgacggttagacgcccaataagggtttcttcgccagcaagaatcgatagggtttggtaatagtttg  4025000                                                                    -------->HAHB4                                                                    <---------ICU4                                                                    --------->ATHB51                                                                   <---------AHL20(2)                                                                   <---------ATHB51                     --------->At4g35610                      ----------->GT1  ---------->DOF2                <---------ZAT6     ------->GAMYB<---------At4g35610--------->AHL20(2)           <----          <---------ICU4        ----------->RAV1(1)  ---------->DOF2<--------ATHB1    --------->ANAC58       <-----------GT1         --------->REM1(1)--------->At4g35610--------->ICU4     --------->ANAC58  ----------->GT1    <---------At4g35610     ---------->DOF2----------->GT1 <---------TOE2(3)   -----   ggaatggtataaccattactgtaagcagcctctacaacagaagaagagaaagctgcaaagagaagtgaaataattgttaagaaaagagaagccatttgct  4025100                                                ------------>CBF                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                          <-----------GT1                                     <------                                      ----------->TBP                                         <------          <---------ANAC58            --------->AHL20(2)                                 --------->YAB1          <---------ANAC58           <---------AHL20(1)                            <---------ARR11(3)   <---------REM1(1)                 --------->AHL20(1) --------->CCA1(2)          --------->GLK1(2) -----HSFB2a(2)              --------->ZAT18--------->ANAC46         <---------KAN4(2)   <--------HAHB4 ---->HSFB2a(2)<------------CBF     --------->AHL20(2) <---------ARR11(3)<-------TEIL   <---------YAB1   agaagatgtaaggcttgaattgaactatgtgtgtgcaaatatatatacacgacaatagatataagctagagaatatacatatcagtatctattattaagt  4025200                                                       ------>NtERF2                                                      --------->WRKY45                                                      --------->WRKY38(1)                                                      --------->WRKY12                                                     --------->ATERF1(1)                                                     <------NtERF2                                                    --------->At4g35610                                                --------->ALFIN1                                            --------->ANAC55(1)                                            --------->ANAC46                                            --------->ANAC58                                            --------->ANAC58                                           <---------LBD16  <---------TOE2(3)    --------->ARR11(3)             --------->ALFIN1<---------ANAC46  <---------YAB1                --------->DAG2  <---------DEAR3(1)   ------->TEIL           ========= ---TOE2(3)           ---------->DOF2 <---------PCF2<---------At4g35610                     <-------- ---ANAC55(2)       ----------->HVH21----------->HVH21----------->HVH21      <---------AHL20(2)   <--   atatatgattttgtgtctatgtgtgaaagatgagaaggtgggacacacggatggcgctgactaatgaaatgaaacttatattatcgaaatacttctttga  4025300                                     ------->MYC3                                     <-------MYC3                                     <-------PIF5                                     <-------MYC2                                     ------->PIF5                                 <---------ZAT14                                 --------->ZAT18                                 <---------ZAT18                                 <-------TEIL                               <---------PCF2                              <---------ANAC58                              <---------ANAC58                             <---------MYB46(3)                            --------->ALFIN1                          --------->TGA1a                          <---------TGA1a                          <---------ANAC58                          <---------O2                          <---------ANAC58                          --------->O2  ==================================MYC_MYB    ----------->TGA1                                    --  ------->GAMYB <---------AHL20(2)   ------->MYC2 <---------YAB1                                   <- ===================================bZIP_DOF <---------At4g35610                                ----- --DOF2       <-----------TBP<---------DEAR3(1)----------->HVH21                    --------------->AtSPL8 -------WRKY38(1)     --------->CCA1(2)      --------->At4g35610       <----------DOF2         <-----   tcaacgctcttcgcttatttatagatagacgtgggtgcacgagcttgagatgacgatggattaatggttttgactttggattttagtttgtacttgttta  4025400                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                        <---------ZAT14                                                                                        --------->ZAT14                                                                                     <------MYB46(1)                                                                                    --------->MYB59                                                                                    --------->MYB46(2)                                                                              <---------MYB52(1)                                  ------>ZmHOX2a(1)                         <---------ANAC46 ------->YAB1                     <----------DOF2                           <---------ANAC58 --------ICU4          --------->AHL20(2)                    <---------ZAT6 <---------ANAC58--------- ---->YAB1             <---------AHL20(2)        --------->YAB1         --------->ATHB12<-------TEIL ----AHL20(2)  <---------ANAC46---------->ID1<---------AHL20(2)        <---------YAB1<------MYB83   ataatctcacaagtttggagtatatataatttagtccttttgtatatataaacatagtgactagtctaagtctatgattcgtgagttcggtacacaaaga  4025500                             --------->ANAC58                             --------->ANAC58                           ------>NtERF2                           <---------ATERF1(1)                          <---------DEAR3(1)                          --------->DEAR3(1)               <---------AHL20(2)                          ----------->HVH21          --------->YAB1                         --------->SPL7           <---------ICU4                        --------->At4g35610       --------->YAB1                    --------->ARR14(2)           --------->ICU4<---------AHL20(2)                <---                    <---------ARR14(2)           <---------ATHB12    --------->At5g28300      -------              <---------AtLEC2                 --------->WOX13(1)   ----------->GT1        --------->YAB1             <-------TEIL--------->DEAR3(2)  <------NtERF2 --------->AHL20(2)             >>>>>>>>>MYB98 ->DOF2     --------->AtLEC2<------NtERF2   ------>NtERF2 --------->AHL20(2)             <-----------GT1   cactgcattttgacatgcatggtatcggccgacgcatacaacatggtgccaattatcagatttaatttatcggtaaatacttcaacttgtttaacataat  4025600  Previous    Next  AGI:  At1g11920.1    Description:  pectate lyase family protein. Identical to Putative pectate lyase 2 precursor [Arabidopsis Thaliana] (GB:O65388); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G22080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60346.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectate lyase/Amb allergen (InterPro:IPR002022); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 4023665    to: 4025095    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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