Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------HSFC1(2)                                                               --------->HSFC1(2)                                                            <---------At4g35610                                                          <-----------RAV1(2)         ----------->TGA1                                                         <------NtERF2              --------->At4g35610                                                       <----------ID1               <---------At4g35610                                                       ----------->HVH21            --------->LBD16                                      <---------ARR14(2)------>NtERF2             <---------LBD16                                --------->ZAT2      --------->DAG2    --------->ATHB12----------->HVH21              <----------DOF2   <---------ZAT2    ---------->DOF2   --------->HSFB2a(2)         ---------->DOF2--------->YAB1--------->ARR14(2)----------->RAV1(1)       --------->ZAT18   gagtttgattccaaagctttcgccattgatcacgagctcgtattcgagtataaaaaggcgacagatggttctcgattgcaagagtccggtgacgatttgt  4010400                                                                             <---------DEAR3(1)                                                                             <---------MYB46(3)                                                                            <---------MYB55(1)                                                                            <--------P                                                                           <-----------HVH21                                                                           <---------MYB52(1)  ------                                                                 <---------AHL20(2)    ---------->DOF2                                                                 --------->AHL20(2)--------------->AGL15                                                             --------->AHL20(2)    <---------------AGL15               <---------DEAR3(1)                            <---------AHL20(2)  ------------>CBF  --             <-----------HVH21                              --------->AHL20(1)<---------DEAR3(2)  <--       ------>ZmHOX2a(2)                                    <---------AHL20(2)<------MYB83     ------     <---------ARR11(3)         *TSS                        --------->AHL20(2)<------MYB46(1)--------     --------->ARR11(3) --------->GLK1(2)              ------------>CBF------->TEIL================== <-----------GT1 <------NtERF2<-----------GT1---------->DOF2<---------AHL20(1)<---------MYB46(3)<----   gattttcgatcttctcgtcggagaagaatgtgttactctctaaatgtaaaagagagtttcaatttaataaatgaaccggtcggttcaataaaagggaaag  4010500       --------->HSFB2a(2)       <---------HSFB2a(2) --------------->AGL15 --->ANAC58 ------->MYB52(1) ---------GT1         <---------MYB52(1)                                             ------->TEIL --->ANAC58          --------->LBD16  <---------ICU4        XXXXXXXXXXXXXXXXXXXX>MIR826    <---------ANAC58 -->DOF2           <---------LBD16   --------->ICU4  <---------DEAR3(2)           <---------YAB1 ================MADS_MADS     --------->LBD16      ------>ZmHOX2a(2)     --------->ANAC58 <---------ANAC46 -------HVH21<------------CBF<---------LBD16  <----------DOF2             --------->ANAC58 <---------ANAC58   tcaccggttttagaaaattgttccggtattatccgggtcattaagacgctttgatcggttcaatccagttttaaaaacgctaagatgaatgtagcgtttg  4010600                   <-----------TGA1                   <-----------HVH21                  --------->ANAC58                  <---------bZIP60(1)                  --------->ANAC58                  <---------ANAC55(2)                  --------->O2                                         <------MYB83                  --------->bZIP60(2)                                  <------MYB46(1)                  --------->ANAC46                                    <---------MYB46(3)                  --------->TGA1a                              ----------->HVH21                  --------->ANAC55(2)                          --------->ALFIN1                  --------->bZIP60(1)                         <-------MYC3                  <---------TGA1a                             ------->MYC3                  <---------O2                               <---------TGA1a                 <-----------STF1                            <---------ANAC55(2)                 <-----------bZIP910(1)                      <---------O2                <---------ALFIN1                             --------->O2             --------->ANAC58                                --------->ANAC55(2)             --------->ANAC58                                --------->TGA1a             --------->ANAC46                              ------------->DYT1         <-----------GT1<---------ICU4                     <-------------DYT1       --------->AHL20(2) --------->ANAC58                <---------ATHB12       <---------AHL20(2) --------->ANAC58              --------->WOX13(1)  <---------WOX13(1)    ---     ----------------------->TaNAC69(2)      <-----------HVH21<-----------HVH21                 <---- <---------At4g35610--------->TGA2(2)       --------->ANAC46 <---------ANAC46                   -----   tgaagctaattaaacgagccacgtcatcaagacatgtcaacaaaacgcgtcataagcccaatcacgtgagggctggtaattggtaatcgcaaaacgtaga  4010700                                                     <--------HAHB4         <---------AHL20(2)                          <---------ICU4         --------->AHL20(1)                          --------->ATHB12         --------->AHL20(2)                         <---------YAB1         <---------AHL20(1)                   --------->AHL20(2)        --------->AHL20(2)         ----------->GT1--------->YAB1        <---------AHL20(2)       ---------->DOF2 <---------AHL20(2)                  <---------WOX13(1)    --------->AHL20(2)      ---------->DOF2  --------->AHL20(2) <----------DOF2 <----------DOF2 --->ZmHOX2a(2)      ------------------------>ANAC81--------->ICU4            *TSS<---------AHL20(2) -----ARR14(2)     --------->MYB46(3)        <---------ATHB12   <---------MYB52(1)--------->AHL20(2) ---->ARR14(2)     --------->DEAR3(2)    ------------>CBF   ---------->ID1 <-----------GT1     <-----   tcgccataaattaaatttcgaacagacaaaaaaagaaaagaaaatcaataaataatcatttagtccctttgtttgataaaccctttaattgaaaaaaaaa  4010800                                                <----------DOF2                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             --------->AGP1                                             <---------AGP1                                             <---------ARR14(2)                                             --------->ARR11(3)                                             <---------ARR11(3)                                 ------>ZmHOX2a(1)                                 ====================HOX2a_HOX2a       --------->AHL20(2)                      --------->YAB1         --------->ARR14(2)--------->ANAC58                     ===================HOX2a_HOX2a            --------->ANAC58   <-----------GT1   <------ZmHOX2a(2)      <---------CCA1(2)--------->At4g35610------>ZmHOX2a(1) -----ID1  <----------DOF2       =====================HOX2a_HOX2a    --------->YAB1   acaaattacttctctttccttcgatcatcgtcttcctctggttctcagatctttgaatcgagcagaagcaattttaaatctcctatcaggtttctctaaa  4010900                                                                                 --------->KAN4(1)                                                                                 --------->HSFC1(2)                                                                 --------->ARR14(2)                <-                                                                 <---------ARR14(2)        <---------ARR14(2)                                                           <---------MYB52(1)    <---------KAN4(1)<--                                                         <---------ANAC58        <---------HSFC1(2)--                                                         <---------ANAC46        <---------HSFB2a(1)                                                         <---------ANAC58        --------->HSFB2a(1)                        <-----------GT1              <---------ANAC58           <---------KAN4(2) <--                   --------->ANAC55(2)               <---------ANAC58       --------->HSFB2a(2)<-----                  <---------TOE2(3)              --------->CCA1(2)       <----------DOF2   <---------ARR11(3) --------->AtLEC2<-----------GT1                --------->ARR14(2) ------>ZmHOX2a(2)       --------->ARR11(3)   tccatgctcaagtctaattttacgttttacatttgttcaattttgtatgagatttgcttccgtttgggatcggaactttgagaacgttctgaagatatta  4011000                                                                             <---------ANAC46                                                                <---------MYB52(1)                                                               --------->TOE2(3)                                                               <-------GAMYB <---------ANAC58                                      <---------ANAC46        ----------->GT1<---------ANAC58     --------->ALFIN1                 <---------ANAC58        ------>ZmHOX2a(2) --------ZAT14                        <---------ANAC58      --------->ARR11(3) --------DOF2                 <---------MYB52(1)            <---------ARR11(3)--------->LBD16       - ------->ZAT14              <---------ANAC58         <---------YAB1      <----------DOF2           <- -------DAG2             <-----------GT1           ----------->GT1    <-----------GT1    ------->TEIL ------GT1--------->ARR11(3)<---------ANAC58   <---------TOE2(3)--------->DOF5.7(2)   <---------YAB1<   ctttactgtgtagctcttgaatcaatttttccgtttgatgtcttgtattgatgttgttattagatcgttaattttctttccgtagatgatgaatgtggat  4011100                                                                                            <-------TEIL                                                                                           <--------P                                                                                           ==========                                                                                        <---------TOE1(3)                                                                       <---------YAB1   <---------TOE2(3)         ----------->GT1                                            <---------YAB1  =================        <-------TEIL              <---------MYB46(3)             <----------DOF2    <----------DOF2 -------->At4g35610               ----------->GT1           ---------->DOF2    <---------HSFB2a(1) --------YAB1                    --------->ALFIN1         --------->ANAC58     --------->HSFB2a(1) ---------At4g35610           <---------AtMYB61           --------->ANAC58   <---------GLK1(2)   tatgctgaaattcgttataaactttggatttgatggtggtgaattgtcacaatgtagaaaacgaaagcttttgattatagaattttctttgaggttgatg  4011200                    <---------TGA1a                    --------->O2                    --------->TGA1a                   <---------TOE1(2)              ------->TEIL                                    <---------ZAT6     <----------DOF2<---------O2              <---------ARR14(2)               --------->ZAT6     =========================bZIP_DOF        --------->ARR14(2)   --------->ANAC58 =============================MYC_MYB         --------->ARR11(3)   --------->ANAC58 =============================bZIP_DOF        <---------ARR11(3) --------->CCA1(2)               ----   ttctctgctatatttgaatctcacgtttgaatagttcgtcttgttcaatatctgaatgcaaatagagataagctatttcgaacactcattgttgaaaaat  4011300  Previous    Next  AGI:  At1g11880.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO22037.1); contains InterPro domain Mannosyltransferase, PIG-V (InterPro:IPR007315) Range:  from: 4007704    to: 4010432    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g11890.1    Description:  SEC22 (secretion 22); transporter. Identical to 25.3 kDa vesicle transport protein (SEC22) [Arabidopsis Thaliana] (GB:Q94AU2;GB:O65393); similar to vesicle transport protein-related [Arabidopsis thaliana] (TAIR:AT5G52270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69529.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 4010778    to: 4013124    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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