Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                   --------->ARR11(3)                      <---------At4g35610                ---------->DOF2       <---------ZAT14 -RVE1(1)             --------->At4g35610             ----------->GT1          --------->ZAT18 -CCA1(1)       <---------ANAC46                 --------->YAB1                <---------ZAT18   ttgatgtgatttgaagttttgtatagctgaaattagtttttttaagagaaatgaaaatgtaaagtaccatgagaccaagagtgaacatattgaaaccgct  3931200                                                                                               <-----                                                  --------->CCA1(2)                           -------                                                  --------->ARR14(1)               <---------ANAC46                                                 --------->TOE1(2)                 <---------ANAC58 -                        <---------ANAC58         <---------ARR14(2)                <---------bZIP60(2)                <------NtERF2                    --------->ARR14(2)                <---------ANAC58 <              <---------DEAR3(1)                 --------->ARR11(1)               ----------->STF1 --             <------NtERF2           --------->MYB46(3)                          <---------TGA2(2)<--             --------->ATERF1(1)   --------->MYB52(1)                           ----------->TGA1-----   ------>ZmHOX2a(1)    <---------ANAC58       ----------->ARR10    --------->ANAC58          <------ >MYB46(3)--------->At4g35610   --------->HSFB2a(2)<-------TEIL     --------->ANAC58      ---------->DOF2   gtttcctagagaagcggcagcgagttgcatacttcccaaacgaccagcgaagatacgagtgagcatagacatgccattgttgatgacgtagacaaagatc  3931300          --------->O2          <---------O2       <------NtERF2      ------>NtERF2      <---------RAP2.6(3)     --------->DEAR3(1)     --------->RAP2.6(2)     --------->ATERF1(2)     >>>>>>>>>AtERF-4     >>>>>>>>>AtERF-3     >>>>>>>>>AtERF-2     >>>>>>>>>AtERF-1     >>>>>>>>>AtERF-5     >>>>>>>>>AtERF-7     --------->RAP2.3(2)     --------->RAP2.3(3)     --------->RRTF1(2)     --------->RRTF1(3)     <---------ATERF1(2)    --------->ORA47(2)    --------->ATERF1(1)    --------->RRTF1(1)    --------->ERF1    --------->DEAR3(2)                                 --------->LBD16    --------->RAP2.3(1)                              ------>ZmHOX2a(2)    <------NtERF2                                   --------->CCA1(2)   <---------ATERF1(1)                              <------ZmHOX2a(2)   <---------At4g35610                             --------->ARR11(3)   --------->At4g35610                             <---------ARR11(3)   --------->ZAT2                                  --------->ARR14(2)   ------>NtERF2                                   <---------ARR14(2)   --------->ABI4(2)                             ----------->ARR10   <---------RAP2.3(1)                           <-------TEIL  <---------ARR14(2)                            <--------P  --------->ARR14(2)                         --------->ANAC58 --------->ATERF1(1)                   ------->GAMYB--------->ARR14(1) <------NtERF2                        --------->MYB46(3) -ZmHOX2a(2)                          --------->ANAC46 --------->At4g35610 -->ARR11(3)      --------------->AtSPL8     --------->ANAC58                         <-----------GT1 -------->LBD16   --------->DAG2   <---------WRKY12--------->ARR11(1)             <---------MYB52(1) ---------ATERF1(1)   <-------TEIL <---------WRKY38(1) ------>NtERF2      <---------ANAC58 ------->DEAR3(1) <---------------AtSPL3 --------->ANAC46                 <---------ANAC58 -------LBD16     <---------------AtSPL8 --------->ANAC58                 --------->ALFIN1 ->ZmHOX2a(2)     --------------->AtSPL3 --------->ANAC58--------->DEAR3(1)      <-------GAMYB      - ---ARR11(3)    ---------->DOF2   <------ZmHOX2a(2)--------->AGP1       --------->ALFIN1          ---   gccggagccgccaagtggaaaaggtacttcatctcgatcaacgacgcaaggtagatccgccgaaaatatgacaagtgtgtgtccgttaatacactctcca  3931400                                                                 <---------DEAR3(2)                                                             --------->ABI4(2)                                                            <---------AtMYB61                                                            --------->ALFIN1                                                           <------NtERF2                                                         <---------DEAR3(1)                                                         <---------DREB2C(2)                                       --------->At4g35610 <-------GAMYB                                       <---------At4g35610<---------MYB46(3)                                      <---------MYB46(3) --------->ALFIN1             <---------YAB1          <--------P         <---------ABI4(1)         <---------GLK1(2)         <---------MYB46(3) --------->ANAC46        --------->At4g35610     ------------>AtMYB77 <---------At5g28300                   --------->RVE1(1)        <---------ZAT2          --------->MYB52(1)   <---------LBD16                       --------->CCA1(1)        <---------At4g35610    ----------->HVH21   <---------REM1(2)                   --------->AHL20(2) ----->ZmHOX2a(1)          <---------ZAT14      <---------MYB46(3)       ------->TEIL  <---------AHL20(2) -------->RAV1(2)     --------->WRKY38(1)   <---------TOE1(3)<---------MYB46(3) <---------AHL20(2)---   tcctgaagtcagcttctgattttgttgactccagtaacggttgctgaaggttgttcacggcggtggtcgcttccgaacccattttttttttaaatatcca  3931500                                                                                       --------->O2                                                                              <----------DOF2                                                                            *TSS       <---------bZIP60(2)                        --------->AHL20(2)                                 <---------ARR11(1)                    --------->AHL20(2)               --------->ZAT6        <---------ARR11(3)          --------->AHL20(2)            <---------CCA1(2)                  ------->TEIL<---------O2 ------->DOF2   <---------YAB1          ---------->ID1  <---------CCA1(2) <---------CCA1(2)   aaaagaaaacaaatatttatgaaaaaataaaaacaaaacttcgtctctctctctatctctatcttcgtttaagtctgtatctttctgcgacttggctcag  3931600                                                 <------------CBF                                                -------->ATHB1                                               <---------AHL20(2)                                               --------->AHL20(2)                                  <---------At4g35610                              <---------ARR14(2)--------->ATHB12                           <---------ANAC46    --------->ICU4                ----------->GT1                           <---------ANAC58 <---------AHL20(2)              ----------->GT1     ----------->GT1       <---------ANAC58--------->AHL20(2)            --------->DAG2   <------MYB83            <---------ANAC55(1) <---------ATHB51         ---------->DOF2   <------MYB46(1)       <---------At5g28300--------->AHL20(2)    <---------At4g35610  --------->MYB111(1)   <-----------GT1    <---------AHL20(2)  ---------->DOF2<------ZmHOX2a(1) <--------P  ---------->DOF2  --------->ARR14(2)--------->ATHB51  --------->At4g35610           <----   agagtaggtgtaatataaaggcgattttgccgtgtctgctattttttaaattattgaagaaaaaacaaagctgaaaaagaggaaaataagccttgtttct  3931700                                                                           <---------ANAC46    ------                                                                          --------->ALFIN1     <-----                                                                         ------->MYC2          <-----                                  --------->AHL20(2)                     <-------MYC3          ------                             --------->AHL20(2)                       <---------ANAC58         <-----                             <---------AHL20(2)                       <---------ANAC46        <------                    ----------->GT1                          <---------ANAC58       --------->ARR14(2)                    <---------ANAC55(2)                      <---------AtLEC2       <---------ARR14(2)      <---------ICU4<---------ANAC58                         <---------ANAC58    --------->DEAR3(2)<-      --------->YAB1<---------ANAC58                     <-------GAMYB<---------ANAC58        <------     <---------ATHB12    --------->ICU4                <---------ANAC58  <-------MYC2   ------>ZmHOX2a(1)  <---------AHL20(2)<---------ANAC46                   <---------ANAC58  ------->MYC3<------ZmHOX2a(2) ------DOF2      <---------MYB52(1)           --------->ANAC46  --------->ATHB12------->TEIL---------   ttttttaatcataacatccgtttcgtgaaaattatataaaatgtttacacaaaataggcgtttgcatgtttggcatgtggtgaaccgatcctaatcgtat  3931800    <----------DOF2  <---------------AGL15  =====================================MADS_MADS                          <---------ARR14(2) ->TEIL                                                     <---------At4g35610                  ---- ------ARR10                                    <---------AHL20(2)        --------->ARR14(2) <-------TEIL ----ARR11(1)                                   --------->AHL20(2)    -------->P     <---------------AtSPL8 --->ARR14(2)                                <---------AHL20(1)       ------>MYB46(1)<---------------AtSPL3 ----ARR14(2)               --------->AHL20(2)--------->AHL20(2)      ------>MYB83 <---------STY1(2) ---ARR14(1)         <-----------------AGL3  <---------ARR11(3)       --------->MYB52(1)     ------->TEIL ----------GT1  ----------->GT1              --------->AHL20(1)      ------>ZmHOX2a(1)    <---------ANAC55(2) ---CCA1(2)    --------->DAG2           <------ZmHOX2a(2)   --------->At4g35610    --------->STY1(2) >YAB1        ---------->DOF2           ====================================HOX2a_HOX2a  ------------   cttactctttaggctaaaaagtaactaaaattgaatagttggatcaatatatatatagagtcatatgagtcctaccgatatgactagctagtacgtacat  3931900                                                --------->ATHB12                                                <--------HAHB4                                               <---------ATHB12                  --------->ANAC58     --------->LBD16                  --------->ANAC58    <---------ANAC46            --------->ANAC46    --------->ANAC58                 <---------LBD16           ------->TEIL                    ------    --------->ANAC58     <---------YAB1<---------RAP2.6(3)    <-----------GT1            <---------YAB1 ------->GT1   --------->ARR14(2)  --------->ALFIN1        --------------->AtSPL8      --------->YAB1 --->AtSPL3  --------->LBD16       ----------->HVH21  <---------At4g35610    ---------->DOF2  <------   ggaaacaagttactccagataagccttgtgatgggatgtgccggattgaatcatttagcagattgtacccgataatttgcaaagtgcgattataaattca  3932000                                                                     ------>ZmHOX2a(1)                                                                    --------->TOE1(3)                                                                    --------->TOE2(3)                                                                  <---------YAB1                           --------->GLK1(1)                --------->ATHB12                 --------->MYB52(1)                         <--------HAHB4                --------->AtMYB61                           <---------ICU4                <---------ALFIN1    ------->TEIL           <---------ATHB12                         -               <---------ABI4(2) --------->ANAC58        --------->WOX13(1)            --------->AHL20(2) --------->TOE1(3) --------->DREB2C(2)                   <-----------GT1               <---------AHL20(2) <---------DAG2--------->MYB46(3)--------->ANAC46       <---------AHL20(2)         --------->AHL20(2) --------->TOE2(3) --------->DEAR3(1)      --------->MYB46(3)    <-----------GT1 --------->TOE2(3)  < --->YAB1    <------ZmHOX2a(1)   --------->ANAC58       --------->AHL20(2) --------->YAB1         <-- -TEIL    --------->YAB1   <---------GLK1(1)           --------->AHL20(2) <---------ATHB12       <---   taaccttatttatcaggaccaccggcttgatatccacgaacttcaacaaatacacaaattaatcatttatccttaaatcataaacttaattaaaaacgta  3932100  Previous    Next  AGI:  At1g11670.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G61890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17929.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 3928162    to: 3931576    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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