Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                   ------->TEIL                                     --------->WOX13(1)                              <---------ANAC46                                 --------->DOF5.7(2)                          <-----------HVH21                                    <---------MYB52(1)                   --------->AHL20(2)                                         --------->TOE2(3) <----                   <---------AHL20(2)                                         --------->TOE1(3)<-----       --------->ICU4    <------MYB46(1)     <---------AHL20(2)             <---------TOE1(3)  <----- ---MYB83 <---------YAB1--------->MYB59     --------->AHL20(2)              <---------TOE2(3)<------- ---MYB46(1)      --------->AHL20(2)       <---------YAB1                  <---------DOF5.7(2) ------ ---->MYB59--------->YAB1<------MYB83   --------->AHL20(2)         --------->WOX13(1)       ---------   ggtcatgtagttatcaaaaaaaaaatttggtcatgtgtacgttttattatatgaatagtattgcgatttcaatctgttaacgttatctatcaaatattat  3888300                                                                      <---------AHL20(2)                                                                     <---------AHL20(2)                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                 <------MYB46(1)           <---------AHL20(1)                                 <------MYB83              <---------AHL20(2)                          <-----------TGA1              --------->AHL20(2)                          <-----------HVH21            <---------ATHB12                         --------->ANAC58              --------->AHL20(2)                   <-------- >AHL20(2)               --------->ANAC55(1)           <---------AHL20(2)                  <---------TOE2(3) -----YAB1               --------->ANAC58              <---------ATHB51             <---------AHL20(2) ----AHL20(2)            --------->ANAC55(2)       --------->AHL20(2)--------->AHL20(2)   <---------- ----AHL20(1)            --------->ANAC46     --------->AHL20(2) <---------AHL20(2) --------->AHL20(2) --YAB1----------->GT1  <-----------STF1   <---------ARR11(3)   <---------AHL20(2) --------->YAB1  -- --->AHL20(1)           <-------TEIL   --------->ANAC55(2) --------->AHL20(2)      --------->AHL20(2) >AHL20(1)---------->DOF2<---------ANAC55(2)  <---------AHL20(2)--------->AHL20(2) <---------AHL20(2)   atttcaagaatgtaaagtttcacacatacgtcatttggtttacatgattttaatcaaataatttttttaaatttttttttagtaattaaaatttacgata  3888400                        --------->YAB1                   <---------AHL20(2)        <------MYB46(1)                   --------->AHL20(2)        <------MYB83            --------->YAB1                   ----------->GT1                        <---------ANAC46          <-----------TGA1        --------->GLK1(1)                               <---------ZAT14         --------->ETT(2)         <---------GLK1(1)                               --------->ZAT2         --------->bZIP60(1)      --------->CCA1(2)       <---------ANAC58        <---------ZAT2 -YAB1   <---------bZIP60(1)     <---------ARR14(2)       <---------ANAC58       --------->ALFIN1 -GT1   ---------->ID1 --------->AHL20(2)   --------->MYB59             <---------AHL20(2) -------->DOF2 --------->AHL20(2)--------->ARR14(2) <---------YAB1  <---------AHL20(2)              <   aaaaagaattgtcgtcataatataaataaaaattggatatgctaatttggttatatgagtgcttctctatatttttaattcgagtgctgggcaaaacaag  3888500                                                                                  <---------ICU4                                                                                 --------->ICU4<-----                                                                       <------MYB46(1)         <-----                                                                       <---------ANAC58        ------                                                                       <------MYB83 <---------YAB1                                                                   --------->ARR14(2)          <-----                                                          <---------AHL20(2)   --------->YAB1  ------                                                         <---------------AGL15<---------ATHB12 <-----                     <----------DOF2                     ============================================             <---------AHL20(2)                        --------->AHL20(2)     --------->ICU4   ------             --------->AHL20(2) <----------ID1      --------->TOE2(3)  <---------ANAC58        ------            --------->AHL20(2)---------->DOF2    <-----------GT1   <---------ARR14(2)   ---------->DOF2        <-------TEIL<---------ANAC58 --------->ANAC58  <---------AHL20(2)     <---------YAB1   ------ ---------WRKY38(1) <---------ANAC58 --------->ANAC58 --------->AHL20(2)  --------->ZAT18--------->DAG2   agtcaacatgttcatttaatttgcttttaaaaaaaagacaagcacattgttttacattaatttatagagtatttggtgcaatgataatgaaaaagcatgt  3888600    ---------->DOF2 --PIF5                                                          --------->ATHB12 --MYC2                               <---------ATHB12 --------->AHL20(2) ->MYC3                            <---------ALFIN1   ----------->TBP <---------LBD16 --MYC3                           --------->ZAT14   <---------HSFB2a(2) ->PIF4                           <---------ZAT18   <---------------AGL15                         <-- --PIF4                  ------>ZmHOX2a(1)   <---------ANAC58   --------->ICU4                    <-- ===================================================================MADS_MADS             *TSS    --- ->MYC4      --------->YAB1       <---------ZAT14   --------------->AGL15             ----------->RAV1(1) ->MYC2   --------->GLK1(1)     --------->ANAC46    --------->HSFB2a(2)      <---------ZAT6---------- ->PIF5   <---------GLK1(1)    ------->TEIL  <---------ANAC58   <---------YAB1 ---------->DOF2  -----   gcaaagaaaaggaaatcatagcacttcctcatgtactccactcactagcgttttctataaaatgtcatgatttgcggtagtgaaaggccaacacaaagaa  3888700                        -------->P                 <----------DOF2                        ------>MYB83         <---------ALFIN1                                --------          ---------->DOF2                   <---------MYB55(2)                           <---------ANAC58   <-----------GT1      ------>MYB46(1)     --------->MYB46(3)                           <---------ANAC58 -------ICU4           ----------->RAV1(1) ------>MYB83                          <-----------ARR10 ------HAHB4--------->ANAC58               -------->P                            --------->GLK1(2) ------>YAB1--------->ANAC58               ------>MYB46(1)                      <---------GLK1(2) >DOF2--------->ZAT6  --------->AtMYB61  --------->AtMYB61                    --------->ANAC58 ---->GLK1(2)   ---------->DOF2         --------->MYB46(3)   ---------->DOF2  --------->ANAC58  -----   tcattttacctctaaagccaaagaccaacatgtctaattcaaaccaaccacttctttccaaaccaaagtctcttaagcacaagaatctatgccttgtcct  3888800                                                                      --------->YAB1                                                                      -------->HAHB4                                                                      <---------ICU4                                                                     <---------YAB1                                                                     --------->ICU4                                                                   <---------ICU4                                                                   --------->YAB1                                                                  <---------ATHB51                                                                  <---------ATHB12                                                                --------->YAB1                                                             ----------->RAV1(1)                                                         --------->ZAT6  <---------ICU4                                                     <---------MYB52(1) --------->ICU4            ---                                    --------->DEAR3(1) <---------DOF5.7(2)                       ----                           <----------DOF2           --------->DOF5.7(2)<---------YAB1           <---                          <---------ANAC58  --------->AHL20(2)------>MYB46(1)              --------->ANAC46 ------>ZmHOX2a(1)        <---------ANAC58  <---------AHL20(2)------>MYB83     ------>ZmHOX2a(1) <--- -->ID1 <-----------------AGL3  <---------REM1(2)   <-------GAMYB --------->ICU4    <-----------GT1 ->ZmHOX2a(1)        <-----------RAV1(1)   <---------ATHB12 --------->AtMYB61 --------->TOE2(3)------   ctccttcgtagccattcttggctctgtggctttcttcacagcccaattaatctccgttaacaccaacaataatgatgattccttattaactacgagccag  3888900                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                    <---------WRKY18(1)                                                                                   ----------->HVH21         --------->ZAT2                                                            --------->WRKY12         <---------At4g35610                                                  ------->GAMYB     <----         --------->At4g35610      <---------ARR11(3)                          --------->DEAR3(1)<---- ------>GLK1(1)                  --------->ZAT2             ---------->ID1    --------->RAP2.6(2) ----->ARR14(2)            --------->ANAC58    <---------ARR14(2)            --------->DEAR3(2) <---- ------GLK1(2)--------->ANAC58  --------->ANAC58    --------->ANAC46         --------->MYB46(3) ----- ------ARR14(2)            --------->ANAC58    --------->ARR14(2)          <---------ALFIN1    ------ ----->ARR10  --------->ANAC58  --------->ANAC58  <-----------GT1   ---------->DOF2--------->WRKY38(1)   atttgccatggagctcacgaccaagactcatgccaagctctcttgtccgaattcacgacgttgtcgctctcaaagctcaaccgccttgacctattgcacg  3889000                       <---------ANAC58                       <---------ANAC58                       <---------ANAC46                      <------NtERF2                     <---------RAP2.3(1)                     ------>NtERF2                    <---------ANAC58                    <---------RAP2.6(2)                    <---------ANAC58                    --------->ATERF1(2)                    <---------DEAR3(1)                    <---------ANAC46                    <---------RAP2.3(3) -->MYC4            <---------RAP2.3(2) -->PIF5           --------->RAP2.6(3)                                   --------->ALFIN1 ---MYC4           --------->ATERF1(1)                               --------->SPL7 -->MYC3         <---------AtMYB61                             --------->At4g35610               ---- ---PIF4         --------->ALFIN1                            ------>ZmHOX2a(2)                 <----- -->PIF4         ----------->HVH21                          --------->ARR14(1)             --------->ARR14(2) ---MYC2         <---------DEAR3(1)                         <------ZmHOX2a(2)            <------MYB46(1) ---MYC3       --------->ALFIN1                            <---------ARR14(2)            <------MYB83 ---PIF5<---------ARR11(3)          --------->WRKY12       --------->ARR14(2)       --------->ANAC58 -->MYC2--------->ARR11(3)    --------->ZAT18             <------ZmHOX2a(1)         --------->ANAC58 --->ANAC55(2) <-----------RAV1(1)  --------->WRKY38(1)  ----------->ARR10     <----------ID1  ------   tgtttttgaagaactcggtgtggcggcttgagagcacgatgaccatggtgagcgaggctaggatccgctcgaacggtgttagagacaaggcaggttttgc  3889100                                                                 <------ZmHOX2a(1)                                                              <------NtERF2                                                             --------->LBD16                                                           --------->HSFB2a(2)                                                           <---------LBD16                               ------>ZmHOX2a(2)           <---------HSFB2a(2)                               ============================HOX2a_HOX2a           --------->ICU4    <---------ARR14(2)       <---------HSFC1(2)       <------ZmHOX2a(1)    <------ZmHOX2a(1)         --------->HSFC1(2)       ===============================HOX2a_HOX2a     <---------HSFB2a(1)   <---------ANAC46     ---------->DOF2              <-----------ARR10 ------->HVH21       ------->TEIL                    --------->ARR14(2) ----At4g35610   ------->TEIL--------->ARR14(2)      <---------ARR14(2)   --------->ARR11(3) --->At4g35610<---------WOX13(1)                    <------ZmHOX2a(1)    --------->YAB1         <----   tgactgcgaggagatgatggacgtatcaaaggatcggatgatgagttcgatggaggaacttcgcggaggaaactataatcttgagtcatactcaaacgtt  3889200  Previous    Next  AGI:  At1g11580.1    Description:  ATPMEPCRA; pectinesterase. similar to pectin methylesterase, putative [Arabidopsis thaliana] (TAIR:AT1G11590.1); similar to pectin methylesterase [Sesbania rostrata] (GB:CAD29733.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 3888690    to: 3890811    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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