Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ICU4                                     <-----------GT1 --------->YAB1                                    --------->AHL20(2)                           --------->YAB1           --------->ICU4           <---------AHL20(2) <---------GLK1(2)   --------->YAB1       ------>ZmHOX2a(1)  <---------ATHB12       <---------YAB1 -----GLK1(1)           --------->WOX13(1)      --------->AHL20(2)----------->GT1 ---->GLK1(1)       <-----------GT1 <---------AHL20(2)  --------->YAB1       <-----------HVH21  <----   atccacatcctgttttattttttatccaatcagaatatttaaactttcgatataataatcaagagactaagttaaaaaatgtcatgtagatttaagtagg  3880000                                                                                               ======                                                        --------->ANAC58           <------NtERF2   --                                               ------>ZmHOX2a(1)                 --------->ALFIN1  <-                                              --------->TOE2(3)             ------->TEIL       ======                                             ------>ZmHOX2a(2)              --------->MYB52(1) <-----                                             ----------------->AG --------->ARR14(2)  --------->DOF5.7(2)                                   --------->ANAC58     --------->ANAC58  <---------SPL7     <-------          <---------YAB1           --------->ANAC58<---------LBD16<---------ARR14(2)  <---------MYB52(1)       --------->ICU4             --------->RAP2.6(3)--------->LBD16    ------->TEIL<---------ANAC46 --ZmHOX2a(1)                    <<<<<<<ZML2 ----------------->AGL1--------------------->WRI1<-------   aacagagtaagtatcagtgtaatttcgaaagactagaacggcattgatcctaaaccggaagcaaactggatttgaacgtaccggtgtcgttatctaagga  3880100         ------>ZmHOX2a(2)        --------->GLK1(1)        <------ZmHOX2a(2)        <---------GLK1(1)       <-----------ARR10       --------->ARR11(3)       <---------AGP1       <---------ARR14(2)       <---------ARR11(3)       --------->AGP1       --------->ARR14(2)      <---------CCA1(2)    <---------HSFB2a(2)                                                                       xxxxxxx    --------->HSFB2a(2)                                                                 <---------At4g35610 --------->GLK1(2)                                                                  <-----------RAV1(1) ===============HOX2a_HOX2a                                                         --------->ALFIN1 ------->HSFB2a(1)                                                               <---------DREB2C(2) --------HSFB2a(1)              ----------->GT1                                  <---------DEAR3(1) ==============HOX2a_HOX2a    <---------ZAT14                  <---------ARR11(3)<---------DEAR4(1) -ZmHOX2a(1)               <---------ANAC46                    --------->ARR11(3)--------->ETT(1) --TOE2(3)         --------->At4g35610               --------->ICU4              <---------At1g77200 --TOE1(3)       --------->ATHB12             ----------->RAV1(1)             <-----------RAV1(1)   <   aagattccagatctctccatcatcggaagtcgtgaagtgattttcagaccacataatgttgaaattatcttcaaacgattgtgtcggtgttgctgcgata  3880200                   <---------MYB52(1)                  <-----------HVH21                  <-----------TGA1                  <---------RAP2.6(3)                 >>>>>>>>>AtERF-3                 --------->RAP2.6(2)                 >>>>>>>>>AtERF-4                 --------->DEAR3(1)                 --------->RAP2.3(2)            ---------->DOF2             <---------MYB52(1)      ------>NtERF2<------NtERF2        <------NtERF2     --------->ANAC58                  <-----------TGA1     <---------bZIP60(1)               <---------RAP2.6(3)     --------->ANAC58                  <-----------HVH21                  <---------ANAC58     --------->ANAC46                 --------->RAP2.3(3)                 <---------ANAC58       <---     --------->bZIP60(1)              --------->DEAR3(1)              <----------DOF2<---------ANAC58   <---------ATERF1(1)                >>>>>>>>>AtERF-3             ------>ZmHOX2a(1) <---------ANAC58  <---------DEAR3(1)                  >>>>>>>>>AtERF-4           ------>ZmHOX2a(2)  <---------MYB46(3) --------->SPL7 --------->RAP2.3(1)   --------->RAP2.3(2)      <---------ARR11(3) <---------MYB52(1) xxxxxxxxxxxxxxxx>smallRNA(se3)       --------->RAP2.6(2)      --------->ARR11(3)-------------------- ------ZmHOX2a(1)--------->RAP2.3(3) --------->RAP2.3(1)     <---------YAB1     --------->ATHB12-----   gaggacgacgccattagagccgtcatgaacaagaacagagccgtcatggcagaacagctcgttatgatcctcctttccgtctccattggttgtctctact  3880300                                                                                       --------->YAB1                                                    <---------MYB52(1)                <---------YAB1                                                   --------->LBD16              <---------ANAC58                                                  --------->ANAC55(2)           <---------ANAC58  ---                                                  <---------ANAC55(2)           <---------ANAC46 ----                                                  <---------ANAC58          <---------ANAC58     <---                                                  <---------ANAC55(1)       <---------ANAC58   <----- ------------------WRI1                           <---------ANAC58       <----------DOF2  ---------->DOF2 ->WRI1                                           <---------ANAC46<---------ZAT14--------------->AGL15 ---------------->WRI1                   <---------ALFIN1    *TSS --------->ZAT14<----------DOF2<----   tcgaatatttcgaagagagagagagagagaggtaatgcaatctacacttgttccgtgagtgagaagagtatagagctttcttgcttttattataaagacc  3880400                                                                                              -------                               --------->AHL20(2)                                          --------->YAB1                        --------->YAB1                                                     <---------ICU4                        <---------ICU4                                                     -------->HAHB4                        -------->HAHB4                                                    --------->ICU4                        <--------ATHB1                <----------DOF2                     <---------ATHB51 ------>LBD16          --------->ICU4           --------->REM1(2)                    --------->ANAC55(2) ----->LBD16           <---------ATHB51      <---------ANAC58                 <---------GLK1(2) ------LBD16         --------->YAB1          <---------ANAC58               <---------TOE2(3)-------- ----LBD16          --------->AHL20(2)   <------------CBF   --------->ARR14(1)<---------ARR11(3) -----LBD16   <-----------GT1<----------DOF2 <---------ANAC46  ----------->GT1--------->ARR11(3)<----   ggggaaatgactgttttgaccattaataattcttttaatatgctattgcgtttagacttttgatacggttttttttctaagattttcatgtaataatgat  3880500                              --------->At5g28300             --------->ZAT6                            ----------->GT1       ---------->DOF2                       --------->WOX13(1)                          --------->DAG2         <---------AHL20(2)                  --------->YAB1                         ---------->DOF2         --------->AHL20(2)        <---------ATHB12   --------->YAB1   ----------->GT1          <---------AHL20(2) --------->At5g28300  --------->TOE2(3)   --------->TOE2(3)--------->ANAC58     ----------->GT1     >>>>>>>>>>AtWER<--------ATHB1  <---------YAB1    --------->ANAC58    --------->DAG2      --------->MYB52(1)      <---------YAB1 -->YAB1            ------------------------>ANAC81<---------TOE2(3)       --------->ICU4         <-- ->ICU4           ---------->DOF2      ---------->DOF2    <---------MYB52(2)--------->YAB1     <----- -----YAB1    ---------->DOF2----------->GT1 --------->AHL20(2)----------->GT1     <---------TOE2(3)   gtttacgataatttgtaaaagaaagcaaaaagggtaaatgaaaaagtttaattaaagaaaactaacagtaaaactcaatgatttttatgttaatcaagtg  3880600                                              ----------->GT1                                           --------->MYB52(1)                                          ------>NtERF2                                          <---------SPL7                                          <---------RAP2.6(3)       <------MYB46(1)                   --------->DEAR3(1)       ----------->GT1                   ----------->HVH21               <-----------HVH21       <------MYB83                     --------->DEAR3(2)              <------MYB46(1)            --      --------->MYB59               ---------->DOF2                     <------MYB83               <-    <---------MYB52(1)            <---------AHL20(2)                   --------->MYB59            --- -------ZAT14--------->YAB1       --------->AHL20(2)            <---------ANAC46 <-----------GT1  --- ----ZAT6   <---------YAB1  <---------At4g35610                --------->At4g35610             ------   taaactgtttggttataatacacacggtttagctaattaaaagccgaccggtttattcattaagttgctgagataggtcatttgaaccatattgatgagc  3880700                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                           --------->ZAT2                                                        <-----------RAV1(2)                                                     ------>ZmHOX2a(2)                                                    --------->GLK1(1)              ------>ZmHOX2a(2)                                                    <---------GLK1(1)              <-------TEIL     --------->ZAT18            --------->At4g35610<---------ARR14(2)             <------ZmHOX2a(2) ------->STY1(2)                <---------At4g35610--------->ARR14(2)            --------->ARR14(2) --------STY1(2)               ----------->RAV1(1) --------->ARR11(3)            <---------ARR14(2) ------>ANAC58              ----------->RAV1(1)    <---------ARR11(3)        --------->ALFIN1 ------>ANAC58              --------->MYB52(1)     <---------AGP1------>NtERF2  <---------PCF2    --- --->At4g35610<------ZmHOX2a(1)------->GAMYB      <---------CCA1(2)    --------->ALFIN1        <-----   tagcaagggtactataggaaatatagaaaacaacagcagaacatggagaattggatctccaggctgccaccaagtggaagtgggatccatagaaatgttc  3880800                                    --------->TOE2(3)                                  ------->TEIL                                <---------ZAT14    --------->ANAC58            --------->ZAT14----------->GT1    --------->ANAC58          --------------->AtSPL8  <---------ICU4        ----------->GT1  ---------->DOF2         <-----------GT1      <---------MYB46(3)  <---------ARR14(2) ------>AtLEC2       --------->AHL20(2)     <----------DOF2   ----------->GT1   ---------->TaMYB80 --TEIL            --------->TOE2(3)<----------DOF2   --------->YAB1     --------->CCA1(2)   atgtaaaagcaaaaccaaaaacattatttaactctgtactttaattctttggttaatcttcacttagtaaatctgatatgggaatatgtctaacaaaacc  3880900  Previous    Next  AGI:  At1g11545.1    Description:  xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 8 precursor (XTH8) [Arabidopsis Thaliana] (GB:Q8L9A9;GB:Q9LPY1); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT4G37800.1); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT5G65730.1); similar to un Range:  from: 3878550    to: 3880361    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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