Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ARR11(3)                                                     <---------ARR11(1)                                                     ------->TEIL                   ------>MYB46(1)           -------->P                   ------>MYB83           <---------ANAC58                 --------->MYB46(3)       --------->ANAC55(2)        <---------RVE1(1)                 <---------ANAC58                    ----------->GT1       <---------GLK1(2)                  <---------ANAC55(2)             --------->ARR11(3)       --------->ARR11(3)               <-----------GT1 <----------DOF2--------->YAB1       <---------ARR11(3)    --------->TOE2(3)      <---------CCA1(2) <---------ATHB12   <---------GLK1(2) ->TOE2(3)    <-----------GT1--------->TOE1(3)  ----------->RAV1(2) --------->WOX13(1)--------->TOE2(3)   aaactaatagattttttcaccaactcataaaccttattcgtattacttacccctgtatcttttttgtcatcaatcagaccttgtaaaaccacaatctcat  3872400                                                      <---------ALFIN1                                                      --------->AtMYB61                                                    ------>NtERF2                                                   <---------ALFIN1                                                   --------->DEAR3(1)                                                 --------->LBD16                                                 ------>NtERF2                                                 <---------ATERF1(1)                                                --------->ANAC58                    --------->HSFB2a(1)                                                --------->DEAR3(1)                  <---------HSFB2a(1)                                                --------->ANAC58               --------->LBD16                                                --------->ANAC46               ----------->HVH21                                               <---------LBD16                --------->LBD16                                              <---------ATERF1(1)            ----------->RAV1(2)                                              ------>ZmHOX2a(1)<<<<<<<<<TBF1 <---------LBD16         ---------->DOF2            <---------CCA1(2)--------->MYB46(3)------>ZmHOX2a(1)          <--   catcttcagtccaaagtcgctggaaataagttttcttcgtctcttctcctccgccaccactcttcttcttctcctcttcccctgaaaccttcttagccct  3872500                                                              <---------TOE1(2)                                                              <---------TOE2(2)                                                          <---------HSFB2a(2)                                                          --------->HSFB2a(2)                      <-                --------->At4g35610                       <---------LBD16                          <-                <---------At4g35610                   --------->GLK1(1)                            --                <---------ZAT2                        <---------GLK1(1)                           <--     <-------TEIL          <---------ALFIN1          <---------GLK1(2)                            === ---------HVH21<-----------RAV1(1)                <---------ALFIN1   <-----------GT1 <-----------HVH21   cttcacatccatagacactgctgcttcatccacttcaagagaacgtttagccccagatttctcggaggttttcaccttcttagccctcttcacatccaca  3872600                                                                                --------->MYB52(1)                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                         <---------GLK1(2)                                                                     <-------TEIL                                                                    --------->ARR14(1)              --------->ARR11(3)                                    --------->GLK1(2)   <-----------TGA1                                                --------->ARR11(1)   <-----------HVH21       --------->HSFB2a(2)                     <---------ARR14(2) <-------TEIL <---------ARR11(3)                                   --------->ARR14(2) --------GLK1(2)           <---------HSFB2a(2)                 <-----------------AGL1  <------NtERF2 --------ARR14(2)     <<<<<<<<<TBF1                            <-----------------AG   ------>NtERF2 ------->ARR14(2)<----------DOF2 --------->ZAT14               ----------------->AGL2<---------DEAR3(1) ----ZmHOX2a(1) ------>ZmHOX2a(2)<---------ZAT14 <---------MYB52(1)<---------GLK1(2) --------->DEAR3(1) ======================HOX2a_HOX2a   <---------GLK1(2)         ----------------->AGL1<---------ANAC46   ggattcgtcacaacttgatctttcttcttctcgagttcagagtctgaatcggtttcttcatccgaaccagattcggaatcggaaacggcgtcgagagtcg  3872700                                --------->At4g35610                             --------->TGA2(2)                            <-----------TGA1                           --------->ANAC58                           --------->ANAC58                           --------->bZIP60(2)                       <-----------GT1                        --------->ARR14(2)                         <----------DOF2                    <---------At4g35610                  --------->TOE1(2)          <----------DOF2          <---------ANAC46<-----------STF1              <---------ANAC58           <---------ANAC46<-       --------->ALFIN1<------ZmHOX2a(1)                <---------ANAC46           <---------ANAC58<-       ----------->HVH21<---------ARR14(2)              <---------ANAC58           <---------ANAC58<-  ---------->DOF2   --------->At4g35610     --------->LBD16<---------TOE1(2)   <-----------HVH21 <---   tcttcaaaggtgatgggttttcagaggaaacgtcatcttcatcatccgaagaagagtttcgtgcgatttctttaccttcttcgtcgcttgaagaagcact  3872800          --------->MYB52(1)     ------>ZmHOX2a(2)    --------->GLK1(1)    --------->HSFB2a(1)    <------ZmHOX2a(2)   <---------ARR11(1)   --------->ARR14(3)   <-----------ARR10   --------->ARR14(2)   <---------ARR14(3)   <---------ARR14(2)   <---------ARR11(3)                                                                            ----   --------->ARR11(3)                                                                         <------  <------NtERF2                                                                            <---------  <---------CCA1(2)                                                                       <---------ANAC58  <---------ARR14(1)                                                               --------->ARR11(3) -----NtERF2                                                                       <---------ARR11(3) --------At4g35610                                   <----------DOF2             <---------TOE2(3) --------LBD16                          <---------TOE2(3)                    <------------CBF ------- ------DEAR3(1) <---------WOX13(1)      <---------TOE1(3)             ----------->GT1     <---------ANAC58   cggcggatcttctaacggattgaaacgtctcgacattgttttagggtttatgggactttggagagacttaagaggttgaaattgagatttttgctttgct  3872900                                                                               <------------CBF                                                                              <---------ICU4                                                                              --------->ATHB51                                                                              -------->ATHB1                                                                              --------->ATHB12                                                                             <---------YAB1                                                                             --------->ICU4                                                                             --------->AHL20(1)                                                                             <---------AHL20(2)                                                                             <---------ATHB51                                     ---------->DOF2                      <---------AHL20(2)                              <------------CBF                        --------->YAB1              ---     <---------ALFIN1       --------->AHL20(1)                     --------->YAB1                 <--  --------->REM1(1)         <---------AHL20(1)                    <---------AHL20(2)             <--- -->NtERF2                  --------->ARR11(3)                 --------->AHL20(2)             <------ ---At4g35610              <---------AHL20(2)                 --------->AHL20(2)              ------- -DOF2                   <-----------TBP                      <---------AHL20(2)        ----------->GT1 -->At4g35610          <-----------TBP                      --------->YAB1--------->AHL20(2) --------   gccttcaccacttcgttcttagggtttatatatattgaacaaagtgtctctctgttttccaaaaataaataatcaaaaaattattggaaaacgtataaaa  3873000           ---------->ID1          <-----------GT1    <---------ANAC58   <------------CBF          <---------ANAC58  <---------AHL20(2)         <---------ANAC46                                              <--------- <---------AHL20(2)       ----------->TGA1           ------>ZmHOX2a(1)                 --------->AHL20(2) ------>AHL20(2)        <---------ANAC58            --------->TOE2(3)                  <---------AHL20(2) -------AHL20(2)        <---------ANAC58            --------->TOE1(3)                  <---------AHL20(1) ------AHL20(2)         <---------AtLEC2    --------->GLK1(1)                          --------->AHL20(1) ---AHL20(2)    <----------DOF2      <---------GLK1(1)                                --------->AHL20(2) -->AHL20(2)  ------>ZmHOX2a(1)      --------->GLK1(1)                         <---------WRKY18(1) ->AHL20(2)<-----------GT1----------->HVH21 <---------GLK1(1)                  <-----------GT1   ttatttattgtttttcctctttttttgcatgacgtttagatttccgatttccttccttaaaaatttggaaattagctatattgaccaattttatttccct  3873100                                 <----------DOF2                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                           <---------GLK1(1)                           <<<<<<<<<GATA-1                           <<<<<<<<<GATA-4                           <<<<<<<<<GATA-2                           <<<<<<<<<GATA-3              <-----------GT1                             -                          <---------ARR11(3)           ----------->HVH21         ------->MYC3       -                          --------->ARR11(3)        --------->ARR14(2)        <---------ALFIN1      -                          <---------AGP1          --------->LBD16           <---------ALFIN1  =======                <---------AHL20(2)            ------->GAMYB             <-----------HVH21 <---------ZAT18   <-----------GT1 <---------TOE2(3)         <---------ALFIN1          --------->YAB1    <---------ANAC58  <---------AHL20(2)     <---------CCA1(2)--------->MYB46(3)<---------At4g35610  <-------MYC3 ------>ZmHOX2a(1) --GT1          --------->AHL20(2)   <-----------GT1<---------ARR14(2)<---------ATHB12   <---------ANAC58   atattttatctcttacaaataaatgttagatctctcttttcacaacaacacccgaatatgaccgctcattcaatcgtcgcacacgttgatagcgtccttc  3873200                               --------->ATERF1(1)                               <-----------RAV1(2)                               <------NtERF2                              <------NtERF2                              --------->LBD16                              ------>NtERF2                              --------->At4g35610                              <---------At4g35610                             ----------->RAV1(1)                             --------->DEAR3(1)                             --------->RRTF1(2)                             --------->RAP2.3(2)                            --------->ATERF1(1)                            <------NtERF2                            --------->RAP2.6(1)                            --------->RAP2.3(1)                            --------->RRTF1(1)                           <---------ATERF1(1)                           --------->ABI4(1)                           ------>NtERF2                          --------->DEAR3(1)                          <---------DEAR3(1)                          <---------ATERF1(2)                          --------->ATERF1(2)                          --------->ANAC46                          --------->RAP2.3(3)                          --------->RAP2.3(2)                         --------->ERF1                         --------->ORA47(2)                         --------->RAP2.6(1)                         --------->ATERF1(1)                         <------NtERF2                         --------->RRTF1(1)                         --------->DEAR4(2)                         --------->RAP2.3(1)                                                      ---                        ------>NtERF2   <---------At4g35610                                      ----                        <---------ATERF1(1)                                                      ----                       <---------DEAR3(1)                                               <---------ANAC58               <------ZmHOX2a(2)   --------->ANAC58                                     <---------TGA1a        <---------ANAC46<---------RAP2.3(1)                                             =============    --------->ARR11(3) --------->DEAR3(1)               ==========================================bZIP_DOF   --------->GLK1(1)  --------->ATERF1(1)      >>>>>>>>>TBF1                            --------->TGA1a   <---------GLK1(1) <-----------HVH21 ------------------------>ANAC81                  <---------ANAC58 -------->ANAC46     <---------ATERF1(1)--------->At4g35610   --------->At4g35610       <---------O2 -------->ANAC58<---------ETT(2)   --------->ANAC58     ---------->DOF2                ------->TEIL -------->ANAC58--------->ETT(2)--------->DEAR3(1)>>>>>>>>>TBF1                 <-------TEIL     <--- =====================HOX2a_HOX2a  --------->ANAC46 <----------ID1       <---------REM1(1)      <----   ccaagaaatctcgtgagatcgaccgtcgccgccgcagacggaagcggaagaagaagaacaaagcatctcaggccgatgtagatgcaatggacgtgtcaaa  3873300  Previous    Next  AGI:  At1g11510.1    Description:  DNA-binding storekeeper protein-related. similar to DNA-binding storekeeper protein-related [Arabidopsis thaliana] (TAIR:AT1G61730.1); similar to unknown [Populus trichocarpa] (GB:ABK93310.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 3871778    to: 3872836    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g11520.1    Description:  pliceosome associated protein-related. similar to proline-rich spliceosome-associated (PSP) family protein [Arabidopsis thaliana] (TAIR:AT4G21660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16928.1); contains domain PTHR12785:SF3 (PTHR12785:SF3); contains domain PTHR12785 (PTHR12785) Range:  from: 3873029    to: 3873619    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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