Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->YAB1                                                                                <---------AHL20(2)                                                                                <---------ICU4                                                                                <--------ATHB1                                                                                --------->AHL20(2)                                                                                <---------AHL20(1)                                                                               <---------YAB1                                                                               --------->ICU4                                   <-----------GT1                           --------->YAB1                                --------->TOE1(3)                           <---------YAB1            <<<<<<<<<MYB98      --------->YAB1                             --------->AHL20(2)          <---------YAB1        --------->TOE2(3)                          <---------AHL20(2)         <---------TOE2(3)    <-----------ARR10                 ----------->RAV1(2)    <---------ANAC46         <---------CCA1(2)        ------------>CBF     --------->AHL20(1)      <-   <---------TOE2(3)   --------->ICU4             <----------DOF2  ----------->GT1--------->ICU4<----   ---------->ID1  --------->AHL20(2)       <---------YAB1 --------->YAB1 --------->YAB1 --------->YAB1   aatttgacgtttatgttaaaaaaaaatgatcaaatcttaaccctgtatgattcttttccaattacaacctggaaaattataataatttttagcataatat  3870400                                  <-----------GT1                                 <---------ICU4                              --------->YAB1                              <---------AHL20(2)                              <---------AHL20(1)                              <--------ATHB1                              <---------ICU4                              --------->AHL20(2)                             <---------YAB1                           --------->YAB1                                      ------>NtERF2                  --------->CCA1(2)                                       <-------MYC2                 <---------ARR11(3)                                       <-------MYC3                 <---------ARR14(2)                                    <---------ALFIN1                 --------->ARR11(3)                                 --------->ANAC58                 --------->ARR14(2)                                 --------->ANAC46       ----------->GT1    --------->ICU4                            --------->ANAC58     ---------->DOF2 ----------->GT1                 --------->HSFB2a(2)  ------->MYC2 --------YAB1    --------->ARR11(1) <-----------GT1  <---------HSFB2a(2)  ------->MYC3        ------- -----YAB1   ---------->DOF2 --------->ICU4  <---------REM1(2)    <-----------GT1           <--------   gattacagaaagaaaaaaagatatgggaataataattttcacctctcttcacgttccaaaacagagtataacgccacatgctgcctctattgagctttga  3870500                                                        <---------ARR11(3)      ----------->GT1                                   --------->ARR11(3)                          -     <---------TOE2(3)                                 <---------CCA1(2)--------->ATHB51         ----    ---------->DOF2                      --------->AHL20(2)             <---------AHL20(2)       ---- ---->HVH21  --------->DAG2    ------->TEIL          --------->AHL20(2) --------->AHL20(2)       ---- --DOF2     ---------->DOF2    -------->P------------>CBF  <----------DOF2  <-----------GT1 ---------   catttttaaagtaaaaaagtcaaacatgtgatcaacctcttaattcaatatgaaattatatctttgtagtagaattatttactactatatccagtttaca  3870600                                                                       ------->TEIL                                                                       --------->GLK1(2)  --------->ANAC58            ---------->DOF2      <---------ANAC58    <---------ARR11(1)  --------->ANAC58    --------->AHL20(2)           <---------ANAC46    <---------ARR14(2) --------->DOF2       <-----------TBP              <---------ANAC58   <---------ARR14(1) ----->ANAC58        <---------YAB1     ------->TEIL    ---------->DOF2--------->ARR14(2)          -- ----->ANAC58       <---------------AGL15     <-----------------AG    <---------GLK1(2)<---------ANAC58 ----->ANAC46       --------------->AGL15  <----------DOF2    --------->AtMYB61        <---------ANAC58 >ZAT14             ============================================MADS_MADS        <----------DOF2   --   agaaaagcatccaaactaatgtcattatatagaaaaggaatgaaactttacttacttggaaagaccaaaaccgaatctgtattcttttgtcttgcagtga  3870700             --------->ANAC58             --------->ANAC58                ------>ZmHOX2a(1)           ---------->DOF2                <-----------GT1          <------ZmHOX2a(1)              <-----------GT1    <---------ZAT2                  <---------YAB1 ------>ZmHOX2a(1)                             ----   --------->ANAC58              ------>ZmHOX2a(1)--------->TOE1(3)         --------->AHL20(2) ------   --------->ANAC58             --------->TOE2(3) --------->TOE2(3)  <------------CBF        -------- ------->ANAC58              <------------------------ANAC81      ------------>CBF       --------->AHL20(2) ------->ANAC58   <---------At4g35610 <---------AHL20(2)    --------->YAB1  <---------AHL20(2)-------   gaggcaagcttaggaaagtaatctgatgctgtttccttattattttcctcttccttaaactttcatagaacaattgaaataaatacagtaatcaaataaa  3870800                  ------->TEIL    ----------->GT1   --------->ANAC58   <---------TOE1(3)  <---------TOE2(3)                                   --------->ZAT14        <---   <---------TOE2(3)  --------->ANAC58--------->ZAT18              --------->YAB1               <---- ----->AHL20(2)<---------YAB1         <---------ZAT18             <---------YAB1                ===== --->AHL20(2)--------->YAB1           --------->ZAT14          <---------YAB1         --------->At4g35610 ->AHL20(2) <---------YAB1            <---------ZAT14      <-------GAMYB  --------->At4g35610   ----- -->YAB1 <---------YAB1          ---------->DOF2          <-----------RAV1(1)         <---------At4g35610   aatataaggtttttattatgaatcaaggaaaaatggaaagtgaacttgggttcttggtttctgttgtgatcatatgtgcagacattacagctacagtcct  3870900                                                                                 --------->YAB1                             --------->GLK1(2)                             -------->P    <---------ANAC58                           --------->HSFB2a(1)                           --------->MYB46(3)                           --------->HSFC1(2)                        <---------AHL20(2)  <---------ANAC58   ------>ZmHOX2a(2)       <---------HSFB2a(1)                  --------->AHL20(2)   <----------DOF2 ------LBD16               <---------HSFC1(2)                   <---------AHL20(2)  <---------ICU4 -----LBD16           --------->ANAC58                  ----------->GT1<-----------GT1   <---------ANAC46 =========HOX2a_HOX2a --------->ANAC58        ----------->GT1   <---------AHL20(1)--------->GLK1(2) ->ZmHOX2a(1)       ---------->DOF2         <---------YAB1 <---------AHL20(2)   <---------ATHB12   <-   cgggatcgaagccgagattgctcaaagcaaggttctgttttatattaagagtgaaatgtagtttattttattttaactaccaataatcttttcttgtatt  3871000                             --------->YAB1                             <---------ICU4                         <---------YAB1                       <---------ICU4                     --------->HSFB2a(2)                       --------->YAB1                     <---------HSFB2a(2)                  <---------ALFIN1                     --------->GLK1(2)                 --------->bZIP60(2)                   <---------ARR14(2)                 <---------At4g35610                  <---------GLK1(2)                 --------->ANAC58                   <---------TOE2(3)               <---------ALFIN1               <---------ARR11(3)         <-----------HVH21<---------ICU4    --------->ANAC46         ------>ZmHOX2a(1)--------->YAB1    --------->ANAC58     <-----------------AGL1 <---------YAB1  --------->ANAC58         ---------->DOF2        --------- --------TOE2(3) --------->ANAC58   ----------->RAV1(1)--------->ARR14(2)         --------->ALFIN1   tgatgtttatccttcaggcacctcatcatcatcatcaacaacattcaagacattcaggttctggatgtcgaagaagccccagcgatggagcatttgctga  3871100                                                           <---------ZAT18                                                           <---------ZAT14                                                           <------NtERF2                                                           --------->ZAT18                                                        --------->At4g35610                <---------ANAC58                  <----------DOF2                        ---------->DOF2                <---------ANAC58                 <---------AtLEC2                  --------->ARR11(3)    --------->At4g35610                          <---------ANAC58                  <---------ARR11(3)    --------->ZAT2                               <---------ANAC58            --------->ANAC58    <---------At4g35610                 --------->STY1(2)  --------->ZAT14   --------->ANAC46      -- >At4g35610<---------ATHB12           ------>ZmHOX2a(1) --------->ATERF1(1)  --------->ANAC58   -----   gggagtagctgcaatggtgcttctgtttattgtccatgtcctagctaatgtgcttggaggctgcacttacattcgctctaagcaagatttcaaaagagca  3871200                       <---------GLK1(1)                       <----------DOF2                      <---------ANAC58                      <---------ANAC58          --------->CCA1(2)                          <---------ARR11(3)         <---------GLK1(2)             --------------->AGL15         --------->ARR11(3)            <---------------AGL15         <---------ARR11(3)            --------->LBD16<---------YAB1         --------->ARR14(2)            ------>ZmHOX2a(1)                      ---------->DOF2         <---------ARR14(2)<---------ANAC58        ----------->GT1          --------->YAB1       ----------->ARR10   <---------ANAC58      ---------->DOF2     <---------GLK1(1)             <- ----->GAMYB     <-----------RAV1(1) ----------->RAV1(2)             --------->GLK1(1)           <--- ---->MYB52(1)   ================================RAV --------->ARR11(3)   --------->AtLEC2    <------   acggcgaacaagatactcgctgtggctttccttgttctctcctggtaatggaaaagataataggtttttggatttcattcaaaagacaaatttgaattat  3871300  Previous    Next  AGI:  At1g11500.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24186.1); contains InterPro domain Protein of unknown function DUF1218 (InterPro:IPR009606) Range:  from: 3870833    to: 3871570    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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