Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------LBD16                        --------->KAN4(2)  <---------AHL20(2)  <---------ARR14(2) --------->AHL20(2)   ---------->TaMYB80                                                <---------AHL20(2) -----TOE2(3)         --------->ARR14(2)                                      ---------->DOF2 --->MYB52(1)         <---------KAN4(2)             ------>ZmHOX2a(1)    --------->AHL20(2) <-------- ----DOF5.7(2)    --------->YAB1        <----------DOF2      <---------ANAC55(2)----------->GT1    <-   cgatttaatccattactcaataagaatatgctcgggtttgtgctttgttccctcctcacaaacacttatcttatataaaataaagtttattttttagatt  3856600                                                           --------->KAN4(1)                                                     --------->ALFIN1                                                  --------->MYB55(2)                                                 --------->ALFIN1                                               <---------ANAC58                                 <---------AHL20(2) <---------ANAC46                                 --------->AHL20(2)<---------ANAC58                       --------->AHL20(1)      <---------ANAC46                                    <-                       <---------ARR11(3)      <-----------RAV1(1)           --------->AHL20(1) <----                       --------->ARR11(3)      <---------ANAC58              --------->ARR11(3) -----                      --------->AHL20(2)       --------->ALFIN1              <---------AHL20(1) -----                    --------->AHL20(2) --------->STY1(2)   <---------HSFB2a(1)             --------->AHL20(2)            ----------->RAV1(1)  --------->AHL20(1)<---------ANAC58     <---------AHL20(2) <---------AHL20(2) -TOE2(3)  <----------ID1       --------->AHL20(2)<---------MYB46(3)    --------->AHL20(2)--------->AHL20(2) --------ZAT6     --------->AHL20(2)   <---------STY1(2)  <---------KAN4(2) <---------AHL20(2) ------   agtcttaaccagaacaacaaaaaaatatatacaaattaattagctagttgtgtgggtgggaacattcaaactatttaaatattttgacaaaaaaaaattt  3856700          <-----------GT1    <---------AHL20(2)                --------->GLK1(2)  <---------YAB1             --------->LBD16       --------->AHL20(2) <---------AHL20(1)         --------->ANAC46       <---------AHL20(2) <---------AHL20(2)     ---------->DOF2       <---------AHL20(2) --------YAB1<----------DOF2<---------ANAC55(2)--------->AHL20(2) -----AHL20(2)       --------->YAB1  <---------ARR11(3) ---->AHL20(2)       --------->ANAC55(1)      <---------YAB1 ---->AHL20(1)       --------->ANAC46<---------GLK1(2)     ------->TEIL --->AHL20(2)<---------DAG2<---------LBD16   <---------AHL20(1)       --------->ANAC46----------->GT1   tattatttttttttacttttcacacataatgcggaacaagattctaatattatttaaaatgaactcgagtagacaccactaagtttttttgtaaaaaatg  3856800                                                                                             <-------                                                                                           ----------                                                                                       <---------ANAC46                    --------->AHL20(2)           <----------DOF2                 ------->MYC3--------       ---------->DOF2      ------------>CBF  <---------ARR11(3)                 <-------MYC3-------- <---------YAB1   ----------->GT1         <---------LBD16--------->YAB1       --------->ANAC46   tttttgatagaaagacaactaagttaatacaacaattcttcaactcagggtcttttctattagaattagagaacccatacacacatgtttcttatatata  3856900              <--------P     <---------HSFB2a(1)     <------MYB46(1)     <------MYB83                                               --------->ANAC46     --------->HSFB2a(1)                                     <-------TEIL  <------ZmHOX2a(1)      ---------->DOF2       <----------DOF2--------->ANAC46 --AHL20(2)  <-------GAMYB              ------------>CBF ------->TEIL        ---------->DOF2 ->TBP      <---------MYB46(3)      <---------ANAC58   ------->GAMYB ----------->HVH21 --->TBP --------->MYB52(2)         <---------ANAC58<-----------GT1------>MYB83  ---------->DOF2 ->AHL20(2)<---------TOE2(3)    <------------CBF   <-----------GT1 ------>MYB46(1)       <------ZmHOX2a(1)   tagaggaaggtttgtggttgccaaactcaaagcacattgggtttcaattctttttaacgcacatacaccaaatgacatagaaagaaagagaggacgagag  3857000            --------->CCA1(2)            <---------GLK1(1)                                                                   -----            --------->GLK1(1)                                                                 <------            <----------TaMYB80                                                                <------           ---------->TaMYB80                                                          <------MYB83           <---------ARR14(2)                                                          <------MYB46(1)           --------->ARR14(2)                                                          <---------ANAC46           <---------ARR11(3)                  --------------->AGL15                  <---------MYB46(3)           --------->ARR11(3)                  <---------------AGL15                  <---------DEAR3(1)          <------ZmHOX2a(1)                   <------NtERF2 ----------->GT1           --------->MYB46(2)    <---------ANAC58               --------->YAB1  --------->YAB1                     --------->MYB52(2)    <---------ANAC58     ---------->DOF2     ------>NtERF2  --------->YAB1           <-------TEIL   <---------MYB46(3)  <---------ZAT6 <---------ICU4  --------->YAB1    --------->ANAC46      -------   agggatgggtgaggatatgcgagtagtgaaagtagaatcaaaatggccaccgataatagtaatggtaatatcacaagtagcaatgggttcggtgaatgca  3857100                                              <---------ANAC58                                      --------->ATHB12                       <---------ANAC46       <---------ANAC58                     <------MYB83     <---------ICU4      ---------->DOF2<------MYB46(1)--------->ARR11(3) -->TEIL            <---------AtMYB61<---------YAB1 ---ZAT14        <-----------RAV1(1)<---------ARR11(3) ---ZAT18 <---------ARR11(3)       --------->YAB1                   <----------DOF2 -->ZAT18 --------->ARR11(3)      <---------YAB1                  ------>ZmHOX2a(1)------>ZmHOX2a(1)   cttgtgaagaaagctcttgatgttggtgtgaaccatatgatcattggtgcttatcgaattgctatttcctctttcattctggctcctatcgcctatattt  3857200                                                  --------->ARR14(2)                                       <---------DAG2                             <---------AHL20(2)                                       <----------DOF2                            --------->AHL20(2)                                    <---------AHL20(2)                ===============================                             ----------->GT1      <---------ARR14(2)  <----------DOF2            <---------AHL20(2)      <-----------GT1                   <---------------AGL15  --------->DAG2         ----------->GT1       <---------ANAC46       --------->TOE2(3)   tggaaaggtttgatttttttgatgaaatagtaagttatttacttttttggcgaatattgtgagaatgctctactttaacatgaaataaatataaactagt  3857300                        -------->ATHB1                        -------->HAHB4                        <---------AHL20(2)                        --------->ATHB51                        <---------ICU4                        --------->ATHB12                       <---------ATHB51                       <---------YAB1                       --------->ICU4                    --------->AHL20(2)                    <---------AHL20(2)                ----------->GT1           --------->CCA1(2)          <---------AHL20(2)                     <---------ANAC58             --------->LBD16          <---------AHL20(1)                     <---------ANAC58 ----------->GT1    <---------TOE2(3)          --------->AHL20(1)                     --------->ANAC55(2)        <---------LBD16      --------------->AGL15                    <-----------GT1   ----------->GT1    --------->MYB52(1)      <---------------AGL15             ------>ZmHOX2a(1)<---------ZAT6    --------->MYB52(1) =====================MADS_MADS        --------->TOE2(3)<---------YAB1  --------->YAB1          -----   atttgttactaatatatgaagtttaattattgacattttttcctaaaatttacgtcttattgttaacagggaaataataccggaaataacgtttaggcta  3857400                         <---------LBD16                        <---------ANAC58                                  <---------ANAC58                     <---------WOX13(1)                                   <---------ANAC58                    <---------ANAC58                     <---------AHL20(2)      <---------ICU4<---------ANAC58                <---------AHL20(1)   ---------->ID1     <------ZmHOX2a(2)  <---------ANAC58   --------->ANAC46            <-----------RAV1(1) ---->MYB52(1)--------->ATHB12    ---------->ID1--------->YAB1      <----------DOF2         <--------   atggtcgatcatttcatcagtggattgctcgggtttgtcttctcaactcaacataatatttgattatgttcttttgtcgtccattttcaatttcctttcc  3857500  Previous    Next  AGI:  At1g11460.1    Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G01070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66187.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 3857005    to: 3859268    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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