Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->DAG2    ---------->DOF2 ----->TOE1(2)                                  --------->AHL20(2) --->MYC3                                       <---------AHL20(2) ----MYC3                                   --------->AHL20(2) ---->O2                                    <---------AHL20(2) -----O2                                 --------->AHL20(2) ---->TGA1a                              <---------AHL20(2) -----ANAC55(1)                         --------->AHL20(2) --------->At5g28300           ---------->DOF2 -----ANAC58                          --------->YAB1--------->YAB1              --------->LBD16 -----ANAC58                         <---------AHL20(2)   ----------->GT1       ----------->GT1    <- -----TGA1a                         --------->AHL20(2)   --------->ZAT6       <---------LBD16<------- -----ANAC46   ------->TEIL   <-----------GT1--------->AHL20(2)             <---------WRKY18(1)   <--   gtgtgataaagccaatgtatcggttctcatttctactatataataaataaataaatataacagtaaatatacacatattgaccggaaaaaaaaaagattg  3852800                                                                           --------->YAB1                                                          ---------->ID1   --------->AHL20(2)                                               ------>ZmHOX2a(1)           <---------AHL20(2) --------At5g28300   ----------->HVH21     <---------ARR14(2)       ----------->GT1 --GLK1(2)----------->GT1                  --------->ARR14(2)    --------->TOE2(3) ---------GT1  <---------YAB1           --------->ANAC55(2)  <----------DOF2      <---------LBD16   <   ttaccgcatgagcagttatatttgtgacgacttcttaaacttaagtatcctactaattttgttctttcattagttaataatatgctcgggtttgtagtag  3852900                                                                <---------AHL20(2)                                                                --------->AHL20(2)       --------->KAN4(1)                                                               <---------AHL20(2)        <---------HSFB2a(1)                                                               --------->AHL20(2)     <------ZmHOX2a(1)                                                               --------->AHL20(1) --------->REM1(2)                                                               <---------AHL20(1)--------->ALFIN1                                   ---------->DOF2        --------->AHL20(2)   <---------ANAC46                               ---------->DOF2          ----------->GT1        <---------ANAC58                            <---------AHL20(2)         --------->DAG2          <---------ANAC58 ----------DOF2         ------>ZmHOX2a(1)             ---------->DOF2 <---------TOE2(3) <---------KAN4(2)   tgctttgttcttcacaaacgcttatcctatataaaaagaaagtttttttagaccagaaaagtaaataaaattaagctagttgtgtgtaggaacattcaac  3853000                                                                    <---------AHL20(2)                                      --------------->AGL15        --------->AHL20(2)                                      <---------------AGL15        <---------AHL20(2)                                     --------->ANAC55(2)       --------->AHL20(2)                             <---------AHL20(2)               <---------AHL20(2)                             <---------YAB1                   <---------YAB1                    <----                           --------->YAB1             --------->GLK1(2)            --------->ZAT18  -                          --------->AHL20(2)         <---------ARR11(3)            <---------ZAT14  <                          <---------AHL20(2)--------->ALFIN1 <---------AHL20(1)    --------->ZAT14 <-                    ----------->GT1<-----------GT1   <---------GLK1(2)        ----------->HVH21<-----   ttgttcaaatatttgaactattttgtaatttataattttacataatgtggaacaagattctaatattatttaaattgaacttgacagcactaagtttttt  3853100                                                   <-----------RAV1(2)                                               --------->ATHB51                                               <--------ATHB1                                              --------->ICU4          <---------YAB1           <---------AHL20(2)      <---------YAB1               <---------YAB1  <---------LBD16    <---------AHL20(2)            <---------AHL20(2)    --------->AHL20(2)            --------->AHL20(1)   <---------AHL20(2)             --------->AHL20(2)                                            <---- -----AHL20(2)                    <---------AHL20(1) --------->LBD16                        --------- -------->AHL20(2)           --------->AHL20(2)<------------ATHB5   --------->AHL20(2)      <-------- ---------AHL20(2)         ----------->GT1    <---------ATHB12      <---------AHL20(2)    --------->ZAT14 --------AHL20(2)    --------->ZAT18          <---------ATHB51     --------->YAB1         <---------ZAT14 ----AHL20(2)   ---------->DOF2  --------->YAB1<---------ICU4<-----------GT1            -------------   atttatttatttttgatagaaagaccactaagttaatataatagagcaataattcaggggttttttctattaaaatgacagaacccaaacacagtactct  3853200                            <--------P                           <---------ANAC58                           <-------GAMYB                           <---------ANAC58                          --------->MYB55(2)                          <---------MYB46(3)                          <------MYB46(1)                          <------MYB83          ----------->TBP --------->MYB52(2) ------DOF2              <---------AtMYB61                            --------->ANAC46 >ZAT14   <---------YAB1 --------->ALFIN1     <----------DOF2         --------->ANAC58       -------- -ZAT14  <-----------------AGL3            *TSS                       --------->ANAC58     --------->ANAC58 -->AtSPL8<---------------AGL15        ---------->DOF2  <-----------GT1                    --------->ANAC58   ttcttataagttataaatatgggaagggtggttgccaaactcaaagtactttgggtcttaactctttctaacacacaaactcacatagaattcaagaaag  3853300                        --------->CCA1(2)                        --------->GLK1(1)                        <---------GLK1(1)                        <----------TaMYB80                       ---------->TaMYB80                       <---------ARR14(2)                                                          <-                       <---------ARR11(3)                                                          <-                       --------->ARR14(2)                      --------->YAB1                      <-                       --------->ARR11(3)                     <---------YAB1                      <--                <---------ANAC58                           --------->DEAR3(1)       --------->ANAC46                <---------ANAC58     ---------->DOF2      <------NtERF2      <---------TGA2(1)    ---               <---------MYB46(3)<---------ANAC46        ------>NtERF2       --------->bZIP60(1)  <--    --------->TOE1(2) <------ZmHOX2a(1)      <-----------------AGL1          <---------bZIP60(1)  --- -->DOF2    --------->CCA1(2)   <------ZmHOX2a(1) <---------ICU4             --------->TGA2(1)   <---   agagaacgagggagagatgggtgaggatatgcgaggagtgaaagtagtctcaaaatggccaccgatgatagttatggtgacatcacaagtagcgatgggt  3853400        ------->TEIL      <---------ZAT14      --------->ZAT18      <---------ZAT18                                     <---------ANAC58 -----MYB46(1)                                    --------->ATHB12 --------ANAC46                    <---------ANAC46       <---------ANAC58 -----MYB83                      <------MYB83     <---------ICU4 -------MYB46(3)                <---------AtMYB61<---------YAB1 ------>MYB46(2)             <-----------RAV1(1)<---------ARR11(3) -------DEAR3(1)      <---------ARR11(3)       --------->YAB1 ------>MYB52(2)      --------->ARR11(3)      <---------YAB1                    <----------DOF2 ----TEIL         ---------->DOF2<------MYB46(1)--------->ARR11(3)            ------>ZmHOX2a(1)------   tcggtgaatgcacttgtgaagaaagctcttgatgttggtgtgaaccatatgatcattggtgcttatcgaatggctatttcctctttcattctggttccta  3853500                                                        <<<<<<<<<<GT-3b                   --------->ATHB12                 <---------AHL20(2)               ----------->GT1                     <---------AHL20(1)                      --------->YAB1      <---------AHL20(2)                           --------->AHL20(1)                 --------->AHL20(2) >ZmHOX2a(1)  --------->DAG2  <---------YAB1 ----------->GT1                      <---------YAB1   tcgcctattttttggaaaggtttattgatattttgatgaaaatagttgagttatatatttttcttatgcaaaattttcaaaaatttgattatatcaaaat  3853600                <---------ICU4                                                   --------->AtMYB61 --             --------->ANAC55(2)                                              --------->ANAC46    <--           <---------AHL20(2)                                         --------->AHL20(2)          <--           <-----------GT1                 <---------GLK1(2)        ----------->GT1               ---        <---------ICU4            <---------YAB1             --------->YAB1 <-----------GT1   -------     --------->YAB1 <-----------GT1      <---------YAB1     <---------YAB1--------->AHL20(2)  <------   agttttttcatatttacataattaacaacatttactacaattgaagattgtcagaatgctctattataacatgtaaataaacaccactacatgttactaa  3853700  Previous    Next  AGI:  At1g11450.1    Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G11460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66187.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 3853243    to: 3855385    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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