Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->At5g28300                                      <------MYB46(1)                                      ----------->GT1                                      <------MYB83<---------At5g28300 ----------DOF2                       <---------MYB46(3) --------ANAC58                      --------->ALFIN1 --------ANAC46                      <---------AtMYB61          <------MYB83 --------ANAC58                    <---------ANAC58        <---------ATHB51 ----ANAC58               --------->YAB1         <-----------GT1<------MYB46(1) ----ANAC58               <---------ICU4   <------------MYB.PH3(1)     --------->DAG2 -->ZAT2     --------->ICU4        <---------ANAC46        <---------ATHB12  <---------YAB1       <-- ---At4g35610------>ZmHOX2a(1)     <---------ANAC58--------->ANAC46   ---------->DOF2             ---   tgcttttactgagtccttatcaacttaatcttcactggggtggtaactgtttcacggtccaatagttggtcttaaagtgactattgtttctaagtttcag  3840900                                                                                                    -                                                                                                  <--                                                                                   --------->ANAC58 -                                                                              <---------YAB1      <--                                                                            --------->ATHB51      <--                                                                           <---------YAB1         <--                                             <---------ANAC58            <---------AHL20(2)       <--                           <----------DOF2   <---------ANAC46           <---------AHL20(2)       <---                        --------->ARR11(3)   <---------ANAC58           --------->AHL20(2)     <-----                        <---------ARR11(3)   <---------AtLEC2 --------------->AtSPL3        <--------            <---------ANAC46      <-----------GT1---------->ID1     --------->ICU4 --------->ANAC58 < -------ZAT14     <---------AHL20(2)<---------ANAC55(2)       --------------->AtSPL8        <-------- ------>ZAT14    --------->AHL20(2) --------->ANAC55(2)       <---------------AtSPL8    <------------CBF   ttctctgtaaatttgtgtataaaataggtctttatattacataatttgcttgtcattttgtatataagtacttatttattattgtaggcaaattgtggtg  3841000 --------->WRKY38(1)            <---------WOX13(1) --------->WRKY12              <------------CBF --------->WRKY45             --------->ATHB12 -------->ALFIN1              -------->ATHB1 -------bZIP60(2)             <------------ATHB5 -------->ATERF1(1)           <---------ICU4 -------ANAC46                <--------ATHB1 -------O2               ------------>CBF                               --------->TOE2(3) -------ANAC58     ---------->DOF2                                      <---------DAG2 -------ANAC58   ----------->HVH21--------->ATHB12                <------MYB46(1) ---NtERF2<---------ANAC58   <---------YAB1--------->ANAC58       <------MYB83                   <--- ----DEAR3(1)--------->ZAT14 --------->ICU4--------->ANAC58     <--------P           <-----------HVH21 -AtMYB61 <---------ANAC58------------>ATHB5                  --------->ALFIN1    <---------ANAC58 ------NtERF2<---------ZAT14 <---------ATHB12             <---------At5g28300     <---------ANAC58 ---RAV1(1) ------>ZmHOX2a(1)<---------ATHB51            <-----------GT1--------->TOE1(3)       -----   gcgtggaccatttcctgcagtgaaagaggcaatgattgaatggacaaggaagaaaggtttcacagtgttggtaaccttattagttcgtgtcatgttctaa  3841100                                                                  ----------->HVH21                                                       --------->LBD16                                                      --------->ANAC55(2)                                                      <---------HSFB2a(2)                                                      --------->HSFB2a(2)                           <                                                      <---------ANAC55(2)                           =                                                      --------->ANAC46                             --                                                     <---------LBD16                               <-                                                   --------->GLK1(2)                       <---------TOE2(3)      ------->TEIL                                 <---------ARR14(2)               <---------At4g35610 <---------ANAC55(2)          ---------->DOF2      --------->ARR14(2)<---------WOX13(1)    <---------TOE1(3) --------HVH21           <----------DOF2 <----------DOF2          <---------YAB1    --------->At4g35610 ---->ANAC46       <-----------GT1      --------->TOE2(3)  <-----------RAV1(2)  <-----------HVH21<---   gtcacatgaatcagttttttcttacaacttttgaaagttcaacctttgagaaaaatccggaacaggttgtgactgatttcgatgtcagcagttaatgttg  3841200                =================bZIP_DOF                <---------O2                <---------TGA1a                --------->TGA1a           --------->PCF2         --------->ANAC58         --------->ANAC58       <--------P             --------->ANAC58       ===================MYC_MYB    <---------TOE2(3)     <-----------GT1    <------------CBF                                       <    <---------TOE1(3) <----------DOF2     --------->YAB1                                         <--- -------GAMYB <---------ALFIN1--------->ANAC58                                          --------->ARR14(2) =========================MYC_MYB  --------->YAB1                        --------->YAB1 --------->ARR11(3) ------->MYB52(2)    <---------ANAC58     --------->AHL20(2)            --------->ICU4  <---------ARR11(3) --------MYB46(3)    <---------ANAC58     <---------AHL20(2)   --------->YAB1           <---------ARR14(2) ------MYB52(1) --------->O2  --------->ANAC46                <---------YAB1--------->YAB1    <------   ttagttgaggtaagccccacttggcttttaacaagaaacatcatttatattgtttcatcaaactatgatcagaaataatcagagaatgaagttcttcttt  3841300           <---------ANAC58                             --------->YAB1     <------------------------ANAC81                  --------->GLK1(2) ----------DOF2                                <---------bZIP60(1) ------ARR11(3)      ------>ZmHOX2a(1)         --------->bZIP60(1) ----DOF2  <---------ANAC58                 ----------->HVH21                         ----------->GT1   atctttttcattttcttgttctccttcttgattcaatcttgttactctgacaacacaatcttgagaagtcagtctttgaaagatggtgatgttatatact  3841400                                                                  <------MYB46(1)                              --------->ZAT2                      <------MYB83                <----------DOF2                                  --------->MYB59               <---------ANAC58                        <-----------RAV1(1)               <---------ANAC58            ---------->DOF2    --------->ARR14(2)           --------->CCA1(2)  <---------ZAT2        <---------MYB52(1)                 --------->ZAT18          --------->ARR14(2)  <---------At4g35610==================RAV               --------->ZAT2          <---------ARR14(2)  --------->At4g35610<-----------RAV1(2)                 --------->At4g35610    ---------->DOF2   <---------GLK1(2)--------->GLK1(1)      <---------ARR14(2)     <---------At4g35610   ctgaaggaaagagatttgcttttggattcttcagcttggggaattcaaagctcaggtatgttgggatttggtatgctcaagtctctgagcagactattgt  3841500                                                                                  --------->At4g35610                         <---------ICU4                                          ------->TEIL                         --------->YAB1                                 <---------ANAC46               <------ZmHOX2a(2)                                        <---------ANAC58               =============HOX2a_HOX2a                                 <---------ANAC58              --------->ARR11(3)                  --------->ZAT14   <----------DOF2              <---------ARR11(3)  ----------->RAV1(2)             <---------HSFB2a(1) <---------ANAC58      <---------YAB1         --------->DAG2     <---------ARR14(2) <---------ANAC58    ------>ZmHOX2a(1)       ---------->DOF2     --------->GLK1(2)<---------At4g35610   atgggttgcaaatagagatcatcctattaatgacacatctggtctgataaagttcagtaccagagggaatctttgtgtgtatgcatctggcaatggaaca  3841600                                                              --------------->AGL15                                                              <---------------AGL15                                               --------->MYB52(2)                                      ------->TEIL  <---------ANAC58       --------->TOE2(3)                <---------TOE2(3)     --------->GLK1(2)      <-----------------AGL2            <---------At4g35610      <---------ARR14(2)      <-----------------AGL1           -------       <------MYB83                  --------->ARR14(2)      <-----------------AG            <-------       <------MYB46(1)          ------>ZmHOX2a(2)   <---------ANAC58 --------->ANAC46       ------>ZmHOX2a(1)   <---------ARR14(2)       <---------YAB1  <----------DOF2  <-----------------AGL3       ------>ZmHOX2a(2)   gagcctatttggtctactgatgttattgatatgatccaagaacctgctttagttgcgaagctatctgatttaggcaaccttgttctacttgatcctgtca  3841700                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                 <---                                                                                                -----                 --------->ARR11(3)                                                      ----------->GT1                 <---------ARR11(3)                                                      ============           <---------HSFB2a(2)                                                         --------->ARR14(2)          <---------ANAC46--------->YAB1                                               <---------ARR14(2)        --------->GLK1(2) <---------ICU4          <----------DOF2                   --------->ALFIN1    --------->DAG2     --------->YAB1       <---------ANAC58               ---------->DOF2    -------   ---------->DOF2  <----------DOF2     <----------DOF2                 <-----------HVH21------>ZmHOX2a(2) ---->HVH21--------->HSFB2a(2) ------>ZmHOX2a(1)  <---------DAG2   <-----------GT1<---------ANAC46 <- ----HVH21<---------LBD16<---------ATHB12   <---------ANAC58    --------->ARR14(2)--------->ALFIN1---   cagggaaaagtttctgggagagctttaatcatcctacaaacactttgcttccctttatgaagtttggattcactcgtcaaagcggtgtggatcgtattat  3841800  Previous    Next  AGI:  At1g11410.1    Description:  S-locus protein kinase, putative. similar to ARK1 (A. THALIANA RECEPTOR KINASE I), kinase [Arabidopsis thaliana] (TAIR:AT1G65790.1); similar to S-locus lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G11340.1); similar to ARK3 (Arabidopsis Receptor Kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT4G21380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39117.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39105.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39115.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kina Range:  from: 3841286    to: 3844432    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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