Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                   --                          <------ZmHOX2a(1)                                                        <-                         ----------->GT1                                                           --                        ----------->GT1                                                            <-                   <---------AHL20(2)                                                              <-                --------->YAB1                                                                     --              --------->AHL20(2)         <---------At5g28300                                     ----            --------->AHL20(1)    <------MYB46(1)                                       ------->GAMYB            <---------AHL20(1)    <------MYB83                                        --------->ANAC58           --------->AHL20(2)    <---------TOE2(3)                               ----------->HVH21<--  ---------->DOF2  --------->AHL20(2)   <-----------GT1                 --------->MYB52(2)---------->DOF2 ------>TOE2(3)<---------AHL20(2)--------->MYB59                       <-------TEIL   --------->ANAC58   tctcaaaagacaaatatataataaaacaggaaaattaggtttttacagtgaaacaaactctgtaagaacatggttcgtcggaagtgacaacccaaagctc  3830500            ----------->GT1           --------->DAG2          ---------->DOF2     <---------WOX13(1)  ----------->HVH21 ------>ZmHOX2a(2) -------->CCA1(2) ------ZmHOX2a(2) ------->ARR14(2) --------ARR11(3) ------->ARR11(3)                                                                    <---------At4g35610 --------ARR14(2)                                                    <---------AHL20(2) --------AGP1                                 <---------ARR11(3)     --------->AHL20(2)             - ------->AGP1       --------->ARR11(3)    --------->YAB1             --------->AHL20(1)-------------- ------->ARR10      <-----------GT1       ----------->GT1           --------->AHL20(2) <------------- -------CCA1(2)--------->AHL20(2)   <<<<<<<<<<<<<<<<<LFY      --------->ZAT6   <----------DOF2  -----   agatctgatggataaagttaaataacttgttcatatttcaacaatggtgatatttgttttgctaacacaaaaaaattgaagcttttctgctaattagaga  3830600   <---------ANAC46  <---------LBD16                  <---------ANAC46 --------->ALFIN1                 <---------LBD16 -------->ALFIN1                --------->ALFIN1 ->AGL15                    ---------->DOF2           >>>>>>>>>>>>>>>>>LFY --AGL15           <----------ID1--------->ALFIN1<---------ICU4    <-----------RAV1(1) ----->DOF2   <----------DOF2--------->DAG2  <---------YAB1    --------->ATHB12    <-----------GT1 <-   aagttggggattatttctttaacaacaaaaaaaagttggggattattttgatcatttcccattgttgatttgttgtccataagtttttcattttctaatc  3830700                                                                                                  ---                                                                                                  ---                                                                   --------->CCA1(2)           <-----                                                                --------->LBD16                ------                                                               <---------ANAC46               ------>NtERF2                                                              <---------LBD16                <-------                     <----------DOF2               --------->DAG2 <---------ARR14(2)         --------             <---------ZAT2                       ---------->DOF2 --------->ARR14(2)       --------->At4g35610             --------->ZAT2         --------->ANAC46      <---------GLK1(2)                <---------At4g35610          ---------->DOF2           --------->ANAC58      --------->ARR14(2)              --------->MYB52(1) --------GLK1(1)     <---------DAG2 --------->ANAC58      <---------ARR14(2)    --------->AHL20(2)---   gatttctgttttcaaagctggaactttattagttataaacgctagagagcctaaaagttggattcgcggatacaaaacaaaaaaaaatcgattagcggac  3830800                                             ======================HOX2a_HOX2a                                             <------ZmHOX2a(2)                                            <---------ARR11(3)                                       --------->ALFIN1                      --------->ANAC46                                     <---------ANAC58                        --------->ANAC58                                     <---------ANAC58                <---------MYB52(1)                                     <---------ANAC46               <-------GAMYB                                 ==================================HOX2a_HOX2a                                 ------>ZmHOX2a(2)                <------NtERF2                           ----------->RAV1(2)                   ------>NtERF2                           <---------At4g35610                  --------->DEAR3(1)                           <---------ANAC55(2)                  <---------ALFIN1    --------->YAB1         ----------------->AGL1              --------->ATERF1(1) ------>ANAC58             --------->ANAC55(2)                 <---------ABI4(2) ------>ANAC46             <-----------------AGL1           --------->ATERF1(1) ----ARR14(2)        ===============================HOX2a_HOX2a--------->MYB46(3) --->ARR14(2)        ===================HOX2a_HOX2a         <------ZmHOX2a(1)--------->ANAC58 --ZAT18    <---------TOE2(3)----------->HVH21        <---------ANAC58--------->WRKY38(1) ->ZAT18  ---------->DOF2<-----------GT1    --------->ARR11(3)<---------ATERF1(1)    --------->ALFIN1 ------>ANAC58       ------>ZmHOX2a(1) <------NtERF2  <---------ANAC58--------->WRKY12          <----   acacaaacaaaataaaggttttcctagttacctgatcgggcgtggagatcaaacttgctggaggagccaccgttgccccaagaaacagtgaggctattac  3830900                                            <------MYB83                                 <---------WRKY38(1)                               <-----------HVH21                                  --------->DEAR3(1)                     <---------AtLEC2       <------MYB46(1)                     <---------At4g35610                    <-------TEIL <---------WRKY12                               --------->At4g35610                    xxxxxxxxxxxxxxx>smallRNA(fl3)                       --------->YAB1                 <---------At4g35610       --------->MYB59      <---------HSFB2a(2)   <------ZmHOX2a(1)          --------->YAB1       ----------------------->TaNAC69(2)      --------->AHL20(2) -----ANAC55(2)  --------->At4g35610     <---------MYB52(1)     --------->HSFB2a(2)--------->LBD16   gagaaaactcaatactaagagctgcatggtactggtcatcgccattaggtctctaattctctatctctcgaaaataaaaatcagccgaggaagtgtaact  3831000                                                               <---------AHL20(2)                                                            --------->YAB1                        <--               <-----------RAV1(1)                          <---------ICU4                  ---------               <---------REM1(1)               <----------DOF2 <-----------GT1            <---------GLK1(2)              --------->ARR11(3)           <---------YAB1  <---------YAB1      ----------->GT1-------   gaagaagagagaatgagatgttgcagagtagaacttaattttgttatgacttttgagtcttataattacttctcatacatatagtttatacagattatat  3831100                                                                                               <-----                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                            ---------                                                                      <------------CBF      <--------                                                --------->ANAC58     --------->ATHB51     --------->YAB1                                      <---------AtLEC2               --------->YAB1  <------------CBF           --------->ANAC58    --------->ARR11(3)       <------ZmHOX2a(1)           --------->ATHB51 ---------GT1    <---------ZAT6<---------ARR11(3)     <---------TOE2(3)          ------>ZmHOX2a(1) >AHL20(2) --------->ANAC46   <---------CCA1(2) --------->ANAC58    <---------YAB1  --------->YAB1 ---->TBP  --------->ANAC58 ----------->TBP --------->AtLEC2      ------>ZmHOX2a(1)<---------YAB1----   ataccaagtttaaacgctagtggaacgtctatatatctctgcatgcatgcacgaataaggaatacatcctataattgtccatcctataattgtcatgatt  3831200          <----------ID1                                              --------->YAB1           ------          <---------ETT(2)                                           --------->AHL20(2)--------->ANAC55(2) ----WOX13(1)                                                     --------->ZAT6       --------->ANAC58 ------CBF<---------bZIP60(1)                                    <---------TOE2(3)     --------->ANAC55(1) --ICU4   --------->bZIP60(1)         --------->ANAC58     <---------AHL20(2)          --------->ANAC46 ->ATHB12--------->RAP2.6(3)    <---------ZAT6             --------->AHL20(2)          <---------ANAC55(2) >ICU4 ----------->TGA1------>ZmHOX2a(1)                 --------->TOE2(3)    <-----------GT1  ------ -YAB1 ----------->HVH21    <---------YAB1   ----------->GT1    <-----------GT1   --------->ANAC46 ----->ATHB12      <-----------GT1    --------->ANAC58   --------->YAB1 --------->ICU4 --------->ANAC58   gaatggtccatgacgacaaaatttcctcatatgagtgtgaacgcatatagataatacaatattaattaacaataaatattaaaccagacacgaaaccaaa  3831300                                                                                           <-------TEIL             --------->ANAC46            <-------TEIL                    <---------YAB1    ------->TEIL      ----------->GT1                --------------->AtSPL3     <----------DOF2        <-------------   <-----------RAV1(1)         --------->ARR11(3)              <---------ANAC58        -------------- >MYB83  <-----------GT1       --------->AHL20(1)        <---------AHL20(2)            <------------- >MYB46(1)   --------->ANAC55(1)     <---------------AtSPL8    <---------ANAC58   --------->YAB1   tgtttgtgttgttacacttaacatatatgtaagtatattgaagtacatgttctcagcattttatggctttgtatgatgttagaataagaaatgtacgtat  3831400  Previous    Next  AGI:  At1g11370.1    Description:  pectinesterase family protein. similar to ATPMEPCRA, pectinesterase [Arabidopsis thaliana] (TAIR:AT1G11580.1); similar to pectin methylesterase [Sesbania rostrata] (GB:CAD29733.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 3828098    to: 3830945    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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