Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------DAG2                 <------MYB83                                                        <----------DOF2                <------MYB46(1)                                                 --------->At4g35610                  <---------AtMYB61 ------->ARR14(2)                                <---------At4g35610         --------->ICU4 --WRKY18(1)           <-------TEIL           <-------GAMYB    ------>MYB83  <---------YAB1 >WRKY45            --------->At4g35610      <-----------RAV1(1)   --------->LBD16  <------ZmHOX2a(1) >WRKY12            <---------At4g35610  <---------ANAC58      ------>MYB46(1) --------->YAB1 >WRKY38(1)     <-----------HVH21        <---------ANAC58 <-----------GT1 ----------------->AGL3   agataagctctgtttcattgtcagatgcatagacagagagattgcctctgttgctgaactttaccatcccagaggtgtcattaataggatggtctctgtt  3817000                                                        <---------At4g35610                         <                                                        --------->ZAT2                        <------                                                        --------->GLK1(1)                   ---------                                                        <---------GLK1(1)                   ---------                                                        <---------ZAT2                      <--------                                                  --------->MYB52(1)                        <--------                                        <---------ARR14(2)     <---------ARR14(2)           ------->TEIL                 <---------At4g35610    --------->ARR14(2)     --------->ARR14(2)           <--------       <---------ATHB12   --------->CCA1(2)  ----------->RAV1(1)                           <---------CCA1(2)   ------->GAMYB<---------MYB46(3)     ------>MYB46(1)  --------->At4g35610                <---------GLK1(2) --------->ANAC58<-------GAMYB         ------>MYB83<---------LBD16                         <---------ARR14(1) --------->ANAC58--------->At4g35610 <---------MYB59 --------->LBD16            --------->GLK1(2)   <   tgcaacccaaacaatagtctgttgagagatttgagcataccaaatcccaacataccggagctctgaatccccaagactgaagaatccaaacgcgaatctc  3817100     --------->LBD16    <---------ANAC46   <---------LBD16 ---------ANAC58 -----ARR10                                          <---------ARR14(2) >ARR14(2)                                     <---------ICU4 >GLK1(2)                                      --------->ATHB51                                <----- -ARR14(2)                                    <---------YAB1                                   ------ -ARR11(1)    <-----------GT1                 --------->ICU4     <-------TEIL                -------- ---ARR10----------->GT1                    --------->YAB1      --------->CCA1(2)     ---------->DOF2 ---------ANAC58                 <------ZmHOX2a(1)   --------->ARR14(2)         <------ZmHOX2a(1)   ttccctgcggagagtataacctcaccatctctcaaggactgtcttctcataattgtatccacagagatacaaaattggaagaggaagaaaaagaagataa  3817200       --------->TOE2(3)                         ----------->GT1                                <----       --------->TOE1(3)                   <---------ZAT6                               --------->WOX13(1) ----DOF5.7(2)                    --------->ANAC58                                    <------ZmHOX2a(2) --->MYB52(1)                     --------->ANAC58                 --------->ICU4 --------->ALFIN1 ->ARR11(3)           --------->MYB52(2) ----------->GT1    <---------ANAC46>>>>>>>>>MYB2 <---------ATHB12   cgaagacaaccttcatatttgtgtttgtttcagagcaaggatttagtgaaaatgtataaatgctgtgtaagtattgaaaaccaagtggatcagtcattaa  3817300                     <---------ARR14(2)                   --------->LBD16                  <---------HSFB2a(2)                  <---------ANAC46                  --------->HSFB2a(2)                 <---------LBD16               --------->ARR14(2)              --------->ZAT2              <---------ZAT2         <------MYB83            <---------ALFIN1         <------MYB46(1)          ----------->RAV1(1)   <---------TOE2(3)         --------->ANAC46     ---------->DOF2       --------->ANAC58  <---------ARR11(3)       --------->ANAC58  --------->ARR11(3)                                      ----------->GT1       --------->ANAC46 <---------CCA1(2)           <---------REM1(1)    <---------ANAC46 --------->MYB52(1)   <-----------HVH21 --------->ARR14(2)  <----------DOF2            --------->ANAC55(2) <---------MYB52(2) -----At5g28300<---------ARR14(2)  <--------P  ---------->DOF2   <-------TEIL---------->DOF2   ------   ctgtgagtcacgccccagttccggatatatctcaaaggttggactttcaaaaagatgtaagaactgattcatgtgacttaaaagtgtgaaactaactaaa  3817400                           <-----------------AGL2                           <-----------------AGL3                       <---------ANAC55(2)                       --------->ANAC55(2)                       <---------ANAC58                       <---------ANAC58                       <---------ANAC55(1)                      --------------->AtSPL8                      --------------->AtSPL3                  <---------ICU4                 --------->AHL20(2)                 <---------AHL20(2)               --------->TOE2(3)              <--------HAHB4              --------->ATHB12                                             <---------ARR14(2)              --------->YAB1--------------->AGL15                          <---------ARR11(3)              <---------ICU4<---------------AGL15                          --------->ARR11(3)             <---------ATHB12                                           <---------ANAC55(2)             --------->ICU4<-----------------AGL1                       --------->ANAC55(2)             <---------YAB1----------------->AG                    <---------ICU4           <---------ICU4  ----------------->AGL3                  --------->ATHB12           --------->YAB1  ----------------->AGL1                  --------->YAB1        --------->YAB1<---------------AtSPL8          <---------HSFB2a(2)  --------->ARR14(2)      ------>MYB46(1) <-----------------------TaNAC69(2)          <---------ATHB12      ------>MYB83--------->YAB1                <------MYB46(1)   <---------YAB1                    -     ----------->RAV1(1)   ----------------->AGL2     --------->HSFB2a(2) <---------CCA1(2)         -    --------->AtMYB61<-----------GT1            <------MYB83     <---------TOE1(2)         <--------- ---->DOF2--------->ICU4  ------->TEIL      <-----------RAV1(1) ------>ZmHOX2a(1)    <---------ANAC46   agaacaccaacaataatcattaattacgtaccaaaaatggagagttttgttggtatcgagaaactcctatgattacatatctacattctgtgtatttgta  3817500              ---------->DOF2       <---------WOX13(1)     <------------ATHB5     <--------ATHB1     --------->YAB1                                <---------GLK1(2)     -------->ATHB1                               --------->At4g35610     <---------ICU4                              ----------->ARR10     --------->ATHB12                           <-----------RAV1(2)    <---------ATHB12                        --------->ANAC58    --------->ICU4                          --------->ANAC58    <---------YAB1                     <---------------AtSPL8    <---------ATHB51               ---------->DOF2<---------At4g35610 ------------>ATHB5     --------->GLK1(2)  --------->ZAT14         --------->AHL20(2) -------->ZAT18        <---------ARR14(2)  --------->ZAT18  --------->ETT(2)               --------->bZIP60(1) ----------->CBF   --------->At4g35610 <---------------AtSPL3 ------------>CBF             <---------bZIP60(1) --TBP<------------CBF --------->ARR14(2)  <---------ZAT18  <---------ETT(2)          --------->ANAC55(2)   tgtgcaatgattggactaaagagcagaaactgtattccaaagaagtacgctcagatgctctgtctacaataaaacatgttctatatttatgtgacttcat  3817600                                                             <-----------GT1                                                           --------->GLK1(1)                                                           --------->CCA1(2)              --------->GLK1(2)                           <---------ARR14(2)             <---------GLK1(2)                            --------->ARR14(2)             <---------ARR14(2)                           <---------ARR11(3)                    -----             --------->ARR14(2)                           --------->ARR11(3)               <---------           ----------->ARR10--------------->AtSPL8    <-------TEIL                 --------->YAB1   acaagaacatgaccagattctgaattttagttcgtaacctatagattactcttacatacagatatacaacttaaacattttttcatcaaaattctttagc  3817700                                   <---------YAB1                                <---------MYB52(1)                              ------>ZmHOX2a(1)                                          --------->ARR14(2)                              ----------->GT1                                            <---------ARR14(2)                              =====================================HOX2a_HOX2a          <------ZmHOX2a(1) <------MYB83          --------->MYB52(1)                                            --------->LBD16 <------MYB46(1)       <---------DOF5.7(2)                                          --------->LBD16 ---->ZAT6          <---------At4g35610                     ===================================HOX2a_HOX2a -DOF2              --------->At4g35610                     ------>ZmHOX2a(2)<----------DOF2        <   agtaggtttatctcacttacagagctaacgtcctgttatttttgtgaggctcacattgttgatcgatgctcttgggtcgctttgtcccgaggattcaact  3817800                                              --------->HSFB2a(1)                                              <------MYB83                                              <---------HSFB2a(1)                                              <------MYB46(1)                                         <---------HSFB2a(2)                                         --------->HSFB2a(2)                                        -             --------->HSFB2a(2) <----------DOF2                                                    -             <---------HSFB2a(2)<---------ANAC58                                         ------->GAMYB     <---------ZAT18            <---------ANAC58                                 <-------GAMYB     <-     --------->ZAT18            <---------ANAC46                              <---------At5g28300  <- ---------ZAT14              <--------P <---------LBD16   --------->ANAC46   <-----------GT1  ------>NtERF2   tctgaagtgccccttctaggtataaatgcaggttgctttggctctggaaggtttgagttctcgctacttagcatccaaatcaccgttgcaacgctcggcc  3817900  Previous    Next  AGI:  At1g11340.1    Description:  S-locus lectin protein kinase family protein. similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G11410.1); similar to ARK3 (Arabidopsis Receptor Kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT4G21380.1); similar to ARK2 (Arabidopsis Receptor Kinase 2), kinase [Arabidopsis thaliana] (TAIR:AT1G65800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39117.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17792.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39132.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kina Range:  from: 3814116    to: 3817420    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g11350.1    Description:  S-locus lectin protein kinase family protein. similar to carbohydrate binding / kinase [Arabidopsis thaliana] (TAIR:AT1G11300.1); similar to B120, protein kinase/ sugar binding [Arabidopsis thaliana] (TAIR:AT4G21390.1); similar to S-locus lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G11330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17786.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17785.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63987.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kinase; (InterPro:I Range:  from: 3817591    to: 3820805    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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