Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                             --------                                                                                             ------->GAMYB                                                                                             <-------                                                                                            <--------                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                       <---------ALFIN1                                                                                       --------->ANAC58                                           --------->CCA1(2)                         ----------->RAV1(1)                                          --------->ARR14(2)                         <---------ALFIN1                                          <---------ARR11(3)                        <---------MYB55(2)                                          <---------GLK1(2)                         --------->MYB46(3)                                          <---------ARR14(2)                       --------->ANAC58                                          --------->ARR11(3)                       --------->ANAC58                                        ----------->ARR10                        --------->DEAR3(1)--                              <---------At4g35610              ------>ZmHOX2a(2)--------->MYB46(3)---                              --------->At4g35610          <---------YAB1       XXXXXXXXXXXXXXXXXXXX>MIR774                          --------->ARR14(2)            --------->ALFIN1    <---------MYB52(1)-------                          <---------ARR14(2)      <-----------RAV1(2)      <-----------HVH21--------- -------GT1      --------->ZAT6 <---------YAB1  ----------->RAV1(1)<----------DOF2------>NtERF2------   actactgtctagcaaaataagactaccatttctgctgatagtaagatttgccacaggggttgtgatcggcttttctctgttagccacccacacaaccacc  3790400  ----------->GT1  <---------ANAC46 >MYB46(1)                         <---------GLK1(2) ->AtMYB61                       <---------YAB1                --------->YAB1 --ALFIN1              ------>ZmHOX2a(2)                     <---------ARR14(2) -MYB55(2)             ====================================HOX2a_HOX2a ------->ALFIN1       =====================================HOX2a_HOX2a                   --------->GLK1(1) ------>LBD16         <------ZmHOX2a(2)             <------ZmHOX2a(1)    --------->AHL20(2) -->MYB52(1)         <---------ARR14(2)           --------->MYB59------>ZmHOX2a(1)       <---------GLK1(1) >MYB46(3)           <---------ARR11(3)       <---------MYB46(3)<---------MYB59     --------->LBD16 >MYB83              --------->ARR14(2)<---------YAB1        --------->GLK1(2)    <-----------RAV1(2)   cgtggtgtaattttcttgaaccagatccctacatactgattctgagagttgttaggactgaagaatcctaactcataaaatccaccaggggaactcagag  3790500                                                                 ------->GAMYB                                                                 ----------->RAV1(1)                                                           --------->TOE1(3)   ---------->DOF2                                            <---------ALFIN1    --------->MYB46(3)                                          --------->ANAC46 --------->TOE2(3)--------->ANAC58           ---------->DOF2         <-------TEIL   <---------TOE2(3)         --------->ANAC58   ------        <-----------HVH21       --------->At4g35610   <---------KAN4(2)   --------->TOE2(2)    ------ ---------->ID1<------ZmHOX2a(1)<---------At4g35610 <------ZmHOX2a(1)     --------->TOE1(2)   -------   tttgtcccaatgtcaaaggacttgaaatagttatagctgcatagccacaacttaggaataaacttaaccacagaaaccaaggaaagagaacaataccaat  3790600                                            ------>ZmHOX2a(2)                                           --------->CCA1(2)                                           <------ZmHOX2a(2)                                          --------->ARR11(3)                                          --------->AGP1                                          --------->ARR14(2)                                          <---------ARR11(3)                                          <---------ARR14(2)                                          <---------AGP1                         ---------->DOF2 <---------CCA1(2) <---------AHL20(2)                  <-------MYC3       ------>ZmHOX2a(1)    --------->AHL20(2) >MYB46(1)--------->ARR14(2)         <-----------HVH21    <---------AHL20(2)                    ----- >MYB83   <---------ARR14(2)         =============HOX2a_HOX2a                                   <---- -->WOX13(1)      ------->MYC3       ==============HOX2a_HOX2a                                ------>ZmHOX2a(1)   ctctcccaagtgtattcccatgtgttcaaaagagttctccttcagatctgaatgtatgaataaaattttgttttgaaaaactgaaaacaatgactcctct  3790700                                                                             <---------GLK1(2)                                                                             <---------ARR14(2)                                                                        ----------->RAV1(1)                                                                        --------->MYB52(1)                                                          --------->WOX13(1) --------->ARR14(2)            ----------->GT1                        <---------At4g35610 --------->ANAC46           <---------TOE2(3)                    <---------ZAT14     --------->ZAT18     ----------->GT1       ----------->GT1      --------->ZAT14  <---------ZAT2     <---------ANAC46 <---------------AGL15 <---------ALFIN1     <---------At4g35610   ------->TEIL       --------->ANAC46   <---------ARR14(2)      --------->ZAT2 ----------->ARR10 ---->HSFB2a(2)      --------------->AGL15 --------->MYB46(3)    --------->At4g35610            ----- -----HSFB2a(2)   <-----------GT1        --------->ARR14(2)   <---------At5g28300       <----------DOF2   agatgtatcgtataatgttattacccataatgtgaaacagacagaaccactgcaggtcatcaattacagctgcacaacagatttgattcgctttgttccc  3790800                                               --------->CCA1(2)                                               <------ZmHOX2a(2)                                              <---------ARR11(3)            *TSS                              --------->ARR11(3)        <---------ANAC46                      --------->ARR14(2)      <---------ANAC46                        <---------ARR14(2)      <---------bZIP60(2)                 ---------->DOF2 <---------ANAC58                      <-----------TBP <---------ANAC58              <----------DOF2--------->AGP1                          --------->GLK1(2) <---------ANAC46 --------->TOE1(2)<---------TOE1(3)                --------->GLK1(2) --------->ARR14(2) ------>RAV1(2)   --------->TOE2(2)<---------TOE2(3)      ---------->DOF2             <---------ARR14(2)   ctgtcgtgatgtgtgtttaacctaggtctctctctttagggttttaaagatccaaacgcagaaagcagagcttctggttgtagtagaggttctgtctgtt  3790900                                                         --------->YAB1                                    --------->TOE1(1)  --------->AHL20(2)                        <---         --------->CCA1(2)          --------->TOE2(1)  --------->AHL20(1)                        <---        <---------ARR11(3)   <-----------GT1           <---------AHL20(2)         <-------TEIL   <---        --------->ARR11(3)  ----------->HVH21         --------->YAB1 --------->ICU4           <------  --------->ANAC46      <---------YAB1   <----------DOF2<---------YAB1--------->YAB1          ------>ZmHOX2a(1)   tcacacataagatatagcattgttttatatttgacacctcgttctttgaataggcattataataaaccgaaatgatgaagaagatgcaatcttgtcctta  3791000                                        XXXXXXXXXXXXXXXXXXXX>MIR1886.3                                        <---------AHL20(2)    <-----------GT1         <---------DAG2 --------->ALFIN1           <----------DOF2 ------ANAC58       ----------->GT1     --------->AHL20(2)                                 --------->ANAC46 ------ANAC58  <---------AHL20(2)      --------->AHL20(2)    -------->P                  --------->ANAC46 ------ANAC46  --------->AHL20(2)      <---------AHL20(2)--------->TOE2(3)               --------->ZAT6 ---MYB52(1)   <---------AHL20(1)  <---------YAB1       --------->REM1(1)       <----------DOF2   ggtgtgttaccatataaaaaatttgtaatactttattctaatttaaaaactccatcttacatcaaccctgtccaaaataagcctttgtctcacactacat  3791100                                                                <---------At4g35610                                                                --------->At4g35610                                                             <-----------GT1                                                            <-----------GT1                                                        <---------AHL20(2)          <---------ICU4                               <---------AHL20(1)          --------->ATHB12                             <---------AHL20(2)         <---------YAB1                                --------->AHL20(2)                        ----         <---------ATHB12                           --------->AHL20(2)                      <--------         --------->ICU4                            --------->ICU4                           ---------    --------->YAB1                                 --------->AHL20(2)                 <----------DOF2    --------->TOE2(3)                         --------->ANAC58 --------->ANAC46       <---------DAG2  --------->ARR11(3)            <-----------GT1    <---------ATHB51                <---------ALFIN1  <---------ARR11(3)         --------------->AtSPL8<---------AHL20(2)           --------->MYB46(3) <---------CCA1(2)   <-----------GT1          --------->ANAC58<---------LBD16--------->ANAC46 <------   aacatatcttaatgatttgaatttttctatttttgtactctctgtagcaagaaataattttttttccgctaccaattccacaacaacacttttcagcttt  3791200                                                    <---------ANAC58                                           --------->AHL20(2)                            <---------At4g35610     <---------ANAC46                            <---------ZAT2 --------->AHL20(1)                            --------->At4g35610     <---------ANAC58                 ----------->GT1           <---------AHL20(1) ----->YAB1      <----------ID1            <---------AHL20(2) -At4g35610     ----------->GT1    --------->ICU4 <-----------GT1                          <---------At4g35610 >At4g35610   ---------->DOF2 ----------->GT1  <---------ICU4                              --------->At4g35610 ----DOF2 ---------->DOF2   --------->ZAT2--------->AHL20(2)                           <---------REM1(1)   catatgtactgggaaagaaaggaaaaacagagctgcaaaaatgaataaatttttacttggacgcttgcaaacgagacttcgctcacatattgtagctctc  3791300  Previous    Next  AGI:  At1g11280.1    Description:  S-locus protein kinase, putative. similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61480.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61390.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17789.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21247.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains I Range:  from: 3787334    to: 3790812    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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