Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ARR14(2)                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                           <---------ARR14(2)                           --------->ARR14(2)                 --------->HSFC1(2)                 <---------HSFC1(2)    <-----------TGA1   =============HOX2a_HOX2a            <------MYB46(1)    <-----------HVH21  ------>ZmHOX2a(1)     <-----------RAV1(2)     ----------->GT1   --------->ANAC46   <-----------------AGL1<-------TEIL  <---------TOE2(3) ---->ANAC58   <---------GLK1(2)<---------ARR14(2)        --------->MYB59                      >>>>>> ---->ANAC58   <---------ARR11(3)          <---------ARR14(2)     <---------ANAC58  --------->ANAC58 ---->ANAC46   --------->ARR14(2)          <-----------HVH21      <---------ANAC58  --------->ANAC58 -YAB1         <---------ARR14(2)        <---------MYB46(3)<------MYB83      --------->YAB1   *TSS>>>   gcctcccgtcatcaccagatacttcctccgatcggaaacgaagcggttcaggtcaaaaattaggttttgcgaggtttaatcaaaacaagcctatgaagaa  3768300                                     <----------DOF2                            <---------AHL20(2)                            --------->AHL20(2)         ---------->ID1                            <---------YAB1         <---------ANAC58          <---------At4g35610 <------------CBF     <---------ANAC58      <------------CBF       <------ZmHOX2a(1) <----------DOF2    <----------DOF2  --------->YAB1    <----------DOF2 >>>TBF1  --------->At4g35610--------->ATHB12   <---------TOE1(3)  ----------->GT1           <------- >>>>>>TBF1 ----------->GT1--------->AHL20(2)   <---------TOE2(3) ----------->GT1--------->WRKY45   -   gaagaagcaggaagcagaaaaaatggccttttaattgggctttaggctttaaggcttggcccattataagggtaatattgtctttgactaaatggagcta  3768400                                               --------->DAG2                                              ---------->DOF2                                            --------------->AGL15                                            <---------------AGL15                                           ----------------->AG                                           ----------------->AGL3                                           ----------------->AGL2                                           ----------------->AGL1                                           <-----------------AGL2           --------->DAG2                  <-----------------AGL1          ---------->DOF2  <---------------AGL15      <---------TOE2(3)    ==================================MADS_MADS <------MYB46(1)           =================================MADS_MADS                          ------ ----------->GT1           --------------->AGL15     <---------ANAC58                     ------>MYB83 <------MYB83             <-----------------AGL1     <---------ANAC46                     ------>MYB46(1) --At4g35610              <-----------------AGL2     <---------ANAC58                   --------->AtMYB61 -------->MYB59        --------->WRKY38(1) <-----------------AGL3                    <-----------GT1   atttggttaagaaaaagttatgccattgactaaatttggacaattaccaaaagtggcttgtgtctctcgtttctaacaaaacaaaataaaccttcccaca  3768500                      --------->YAB1                                             <------ZmHOX2a(1)             <----------DOF2                                                  --------->At4g35610          <-----------GT1      --------->AHL20(2)                             <---------At4g35610   ---------->DOF2<-----------GT1                                ------>ZmHOX2a(1)--------->SPL7 --->ANAC46---------->ID1--------->YAB1            ------>ZmHOX2a(1)      --------->AtLEC2        <--   aaactaaaagtttttctttttcactcatcaaaataaaacaaaaaaaaaacttcctagcatcttcttcctcttactcatgcagaggacgacgatggtgatg  3768600             <------------CBF        <---------ICU4       --------->ICU4       <---------YAB1     --------->YAB1     <---------ICU4                                                                                 -    <---------YAB1<----------DOF2                                                               -----  <---------ICU4 <---------ANAC58                                                       --------->ANAC58  --------->YAB1 <---------ANAC58                                                       --------->ANAC58 -----TEIL------------>CBF            ---------->DOF2 ---------->DOF2              <---------ICU4 ---   ttcatcatcataatcaattgcttttgaacaaaaacaaaatcaaagaaaaaaacacataaaaccccaaaaaaaaaacttctgtacataattaagccagaga  3768700                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                     --------->WRKY18(1)                                                                                   <------MYB46(1)                                                                                   --------->ANAC58                                                                   <---------LBD16 <---------At4g35610                                                                  --------->ALFIN1 --------->At4g35610     ---------->DOF2                                            <---------ZAT2     <------MYB83 -------->AHL20(2)                                              ----------->RAV1(2)--------->ANAC58 ----->DOF2       --------->ICU4                                --------->ZAT2   <-----------RAV1(2) -------->GT1----------->GT1 --------->AHL20(2)      <---------ARR14(2)       <---------TOE2(3)    --   aagaaaataaagacagagtaaaaatgaacgatttattctctaattcattcaagaagaaccaggctcaactgggggatgttgaggcaggtcaagaaacgat  3768800                             --------->GLK1(2)                        <---------ETT(2)                   <------ZmHOX2a(1)   --------->ANAC58                 <---------HSFC1(2)                <---------HSFB2a(2)    --------->ANAC58                 --------->HSFC1(2)       --------->AHL20(2)--------->HSFB2a(2)  ---------->DOF2      --------->YAB1              ------ ----->TEIL     --------->HSFB2a(2)  <------ZmHOX2a(1)        <----------DOF2              <------ZmHOX2a(1)   gaacctcgataaattcttcgaggatgtcgagaatgtgaaggacgacatgaaaggagtcgaggctctttataagaagcttcaagactcaaacgaggagtgc  3768900                                                                                       --------->WOX13(1)                                                     <---------O2                  --------->YAB1                                                     --------->ANAC55(2)   ----------->GT1     <-------TEIL              --------->CCA1(2)     --------->O2  ------>ZmHOX2a(1)  ---------->DOF2  <---------DEAR3(2)    ---------->DOF2              <---------REM1(1)     <-------GAMYB --->ZAT18          ----------->GT1                  <---------ANAC55(2)  ----------->GT1 --------->YAB1   aagacggttcacaatgccaagaaggttaaagagctacgagctaagatggatggagacgtagcaatggtccttaagagggttaaaatcatcaagcagaagc  3769000                                                                                             <-------                                                                                            <--------                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                  <-----------RAV1(1)                                                                            --------->ARR14(2)                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)    <--                                              <---------ANAC58              <---------ARR14(2)    ---                                            <---------MYB46(3)    <---------ARR14(2)  <-------GAMYB                               <---------MYB52(1)       <-------TEIL  <------ZmHOX2a(1)<--------P<---            --------->DAG2    <---------RAP2.6(3)<---------PCF2   --------->ARR14(2) <---------MYB46(3)           ---------->DOF2   --------->RAP2.6(2)----------->TCP11(1)  ===============HOX2a_HOX2a <---    --------->TOE2(3)        --------->ANAC46 <---------ANAC58<---------LBD16 ------>ZmHOX2a(2) <----   tcgaagccttagagaaagcgaatgctaatagccgtaatgtccctggttgtgggcctggttcgtctacggataggactcgatcttctgtggttagcggtct  3769100      --------->At4g35610 ----HVH21 -ZAT18   ---------->DOF2 -------HSFB2a(2)                                <---------TOE1(2)                     <----------DOF2 ------>HSFB2a(2)                       <---------ANAC58           <------ZmHOX2a(1)<---------ARR11(3) ------LBD16                       --------->ARR11(3)            <---------TOE2(3)  --------->ARR11(3) ------ANAC46                      <---------ARR11(3)     --------->YAB1      --------->ZAT18       < -----LBD16         <---------WOX13(1)  <---------ANAC58 --------->ICU4    ---------->DOF2       <---   cgggaagaagctcaaagacttgatggatagttttcaaggtctacgtgctcgtatgaacaatgagtataaggaaaccgtagagcgcaggtctttgtttttc  3769200  Previous    Next  AGI:  At1g11240.1    Description:  similar to hypothetical protein OsI_011255 [Oryza sativa (indica cultivar-group)] (GB:EAY90022.1); similar to Os03g0353500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050128.1); contains domain PTHR14577 (PTHR14577) Range:  from: 3766754    to: 3768294    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g11250.1    Description:  SYP125 (syntaxin 125); SNAP receptor. Identical to Syntaxin-125 (SYP125) [Arabidopsis Thaliana] (GB:Q9SXB0;GB:Q4PT35); similar to SYP124 (syntaxin 124), SNAP receptor [Arabidopsis thaliana] (TAIR:AT1G61290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24123.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 3768724    to: 3769706    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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